Bhi08G000089 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000089
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Auxin-responsive protein
Location	chr8: 4045679 .. 4046029 (+)
RNA-Seq Expression	Bhi08G000089
Synteny	Bhi08G000089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTATCCGATTCCTCTTTAGAGGATAGCTGTATGACTACCACAAAGTCTGATGGGAACAAACCCTCGCTGAATCTCAAGGCTACAGAATTGGGACTAAGTCTCCTTGGATTTGAATCCCCCGAGAGAGATCCAGATATCAGCTTGCATAGCTCTTCTCAACTCGATGAAAAACCACTATTTCCTTTGCACCCATCAAGTGATGGTCACTACTCTTCCCCACATAAGACTGTCGTCTCAGGCAACAAGAGGGGGTTTTCTGATGCTATGAATGAATTCTCAGAGGAAAAATATCACGCTAACATAGGTTTGAAAGCTGGTTCTTTGCTAGAGAACCTTGGAAGTTAA

mRNA sequence

ATGGGATTATCCGATTCCTCTTTAGAGGATAGCTGTATGACTACCACAAAGTCTGATGGGAACAAACCCTCGCTGAATCTCAAGGCTACAGAATTGGGACTAAGTCTCCTTGGATTTGAATCCCCCGAGAGAGATCCAGATATCAGCTTGCATAGCTCTTCTCAACTCGATGAAAAACCACTATTTCCTTTGCACCCATCAAGTGATGGTCACTACTCTTCCCCACATAAGACTGTCGTCTCAGGCAACAAGAGGGGGTTTTCTGATGCTATGAATGAATTCTCAGAGGAAAAATATCACGCTAACATAGGTTTGAAAGCTGGTTCTTTGCTAGAGAACCTTGGAAGTTAA

Coding sequence (CDS)

ATGGGATTATCCGATTCCTCTTTAGAGGATAGCTGTATGACTACCACAAAGTCTGATGGGAACAAACCCTCGCTGAATCTCAAGGCTACAGAATTGGGACTAAGTCTCCTTGGATTTGAATCCCCCGAGAGAGATCCAGATATCAGCTTGCATAGCTCTTCTCAACTCGATGAAAAACCACTATTTCCTTTGCACCCATCAAGTGATGGTCACTACTCTTCCCCACATAAGACTGTCGTCTCAGGCAACAAGAGGGGGTTTTCTGATGCTATGAATGAATTCTCAGAGGAAAAATATCACGCTAACATAGGTTTGAAAGCTGGTTCTTTGCTAGAGAACCTTGGAAGTTAA

Protein sequence

MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKPLFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS

Homology

[Close]

BLAST of Bhi08G000089 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-18
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S   S   +  ++ +K +++LKATEL L L G +SP RD +++L S ++LDEKP
Sbjct: 37  LGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKP 96

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
            FPL PS D   SS  K   SGNKRGFSD M++F+E K
Sbjct: 97  FFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAK 134

[Close]

BLAST of Bhi08G000089 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-18
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S   S   +  ++ +K +++LKATEL L L G +SP RD +++L S ++LDEKP
Sbjct: 37  LGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKP 96

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
            FPL PS D   SS  K   SGNKRGFSD M++F+E K
Sbjct: 97  FFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAK 134

[Close]

BLAST of Bhi08G000089 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15
Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S  DS  +T  +   K +LN KATEL L L   +SPER+ D  L S    DEK 
Sbjct: 25  LGLSDCSSVDS--STIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKL 84

Query: 61  LFPLHPSSD-GHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
           LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K
Sbjct: 85  LFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVK 121

[Close]

BLAST of Bhi08G000089 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15
Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S  DS  +T  +   K +LN KATEL L L   +SPER+ D  L S    DEK 
Sbjct: 25  LGLSDCSSVDS--STIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKL 84

Query: 61  LFPLHPSSD-GHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
           LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K
Sbjct: 85  LFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVK 121

[Close]

BLAST of Bhi08G000089 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15
Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S  DS  +T  +   K +LN KATEL L L   +SPER+ D  L S    DEK 
Sbjct: 25  LGLSDCSSVDS--STIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKL 84

Query: 61  LFPLHPSSD-GHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
           LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K
Sbjct: 85  LFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVK 121

[Close]

BLAST of Bhi08G000089 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-17
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S   S   +  ++ +K +++LKATEL L L G +SP RD +++L S ++LDEKP
Sbjct: 37  LGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKP 96

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
            FPL PS D   SS  K   SGNKRGFSD M++F+E K
Sbjct: 97  FFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAK 134

[Close]

BLAST of Bhi08G000089 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-14
Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           +GLSD S  DS  +T  +   K +LN KATEL L L   +SPER+ D  L S    DEK 
Sbjct: 25  LGLSDCSSVDS--STIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKL 84

Query: 61  LFPLHPSSD-GHYSSPHKTVVSGNKRGFSDAMNEFSEEK 99
           LFPL PS D G  ++ HK VVSGNKRGF+D  +EFS  K
Sbjct: 85  LFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVK 121

[Close]

BLAST of Bhi08G000089 vs. ExPASy TrEMBL
Match: A0A5A7VCY6 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004000 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.1e-50
Identity = 106/116 (91.38%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           MGLSDSS EDSCMT TKSDGNKPSLNLKATEL L L G ESPERDPD  L SSSQLDEKP
Sbjct: 43  MGLSDSSSEDSCMTATKSDGNKPSLNLKATELRLGLPGSESPERDPDNCLRSSSQLDEKP 102

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 117
           LFPLHPSSDGHYSSP KTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS
Sbjct: 103 LFPLHPSSDGHYSSPQKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 158

[Close]

BLAST of Bhi08G000089 vs. ExPASy TrEMBL
Match: A0A1S3BBL3 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488149 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.1e-50
Identity = 106/116 (91.38%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           MGLSDSS EDSCMT TKSDGNKPSLNLKATEL L L G ESPERDPD  L SSSQLDEKP
Sbjct: 43  MGLSDSSSEDSCMTATKSDGNKPSLNLKATELRLGLPGSESPERDPDNCLRSSSQLDEKP 102

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 117
           LFPLHPSSDGHYSSP KTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS
Sbjct: 103 LFPLHPSSDGHYSSPQKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 158

[Close]

BLAST of Bhi08G000089 vs. ExPASy TrEMBL
Match: Q9SSY2 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA2 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 105/116 (90.52%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           MGLSDSS EDSCMT TKSDGNKPSLNLKATEL L L G ESPERDPD  L SSSQLDEKP
Sbjct: 43  MGLSDSSSEDSCMTATKSDGNKPSLNLKATELRLGLPGSESPERDPDNCLRSSSQLDEKP 102

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 117
           LFPLHPSSDG YSSP KTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS
Sbjct: 103 LFPLHPSSDGLYSSPQKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 158

[Close]

BLAST of Bhi08G000089 vs. ExPASy TrEMBL
Match: A0A6J1BQ91 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111004813 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           MGLSDSS EDSCMT TKSDGNKP LNLKATEL L L G ESPERDPDISL SSS LDEK 
Sbjct: 42  MGLSDSSSEDSCMTATKSDGNKPLLNLKATELRLGLPGSESPERDPDISLRSSSHLDEKR 101

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 117
           LFPLHPSSDGHYSSPHK VVSGNKRGFSDAMNEF+E KY AN+GLKAGSLLENLG+
Sbjct: 102 LFPLHPSSDGHYSSPHKAVVSGNKRGFSDAMNEFTEGKYQANLGLKAGSLLENLGN 157

[Close]

BLAST of Bhi08G000089 vs. ExPASy TrEMBL
Match: A0A6J1GHF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111454199 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 95/116 (81.90%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MGLSDSSLEDSCMTTTKSDGNKPSLNLKATELGLSLLGFESPERDPDISLHSSSQLDEKP 60
           MGLSDSS E+SCMT TKSD NKP LNLKATEL L L G ESPERD +ISL +SSQLDEKP
Sbjct: 43  MGLSDSSSEESCMTATKSDENKPLLNLKATELRLGLPGSESPERDSEISLRNSSQLDEKP 102

Query: 61  LFPLHPSSDGHYSSPHKTVVSGNKRGFSDAMNEFSEEKYHANIGLKAGSLLENLGS 117
           LFPLHPS+DG Y SPHK VVSGNKRGFSDAMNEFSE KYH+N+GLK GSLLENLGS
Sbjct: 103 LFPLHPSNDGLYPSPHKAVVSGNKRGFSDAMNEFSEGKYHSNLGLKPGSLLENLGS 158

The following BLAST results are available for this feature:

BLAST of Bhi08G000089 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65670.1	3.6e-18	50.00	indole-3-acetic acid inducible 9	[more]
AT5G65670.2	3.6e-18	50.00	indole-3-acetic acid inducible 9	[more]
AT2G22670.1	2.9e-15	52.53	indoleacetic acid-induced protein 8	[more]
AT2G22670.2	2.9e-15	52.53	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	2.9e-15	52.53	indoleacetic acid-induced protein 8	[more]

BLAST of Bhi08G000089 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38827	5.1e-17	50.00	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q38826	4.0e-14	52.53	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]

BLAST of Bhi08G000089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCY6	8.1e-50	91.38	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BBL3	8.1e-50	91.38	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488149 PE=3 SV=1	[more]
Q9SSY2	1.5e-48	90.52	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA2 PE=2 SV=1	[more]
A0A6J1BQ91	1.4e-46	86.21	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111004813 PE=3 SV=...	[more]
A0A6J1GHF6	1.5e-43	81.90	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111454199 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31734:SF165	AUXIN-RESPONSIVE PROTEIN	coord: 1..98
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000089	Bhi08M000089	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus