Bhi07G001294 (gene) Wax gourd (B227) v1

Overview
NameBhi07G001294
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionbinding partner of ACD11 1
Locationchr7: 45287068 .. 45289975 (+)
RNA-Seq ExpressionBhi07G001294
SyntenyBhi07G001294
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGACCTCGTTGAGATTATTAGGTATTCATTTTATTCCGTATAGAGTATTTGATTTCATGTCATCGAGTCTGTAATTTCACGAGCTTTACATCTTTTGTAGTGAACAAGTCCTTTATTTGAAAGATGTCAATCGATCTTTCTAAACGTGAATAGGTTTGAGTTTGATTTTGAAGAAGCTGTTTAGTGGTGGACACCTTAAGTTTATGGGCTTTTTGTTAGCGTTTATATTTTGGTTTATTATCATTTTTTCGAAACCGCTTGGTGTAAGGATTTCTGGTTTCATGAAAGCAGATCTGGTGATGATGCCTGCACTGCCTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGTGAGTATTTCAATTCCAAATACGCTTCAGGCCTACAGGTGCTACAATACAGTATTTGATTCAATTCTTCCATTACTCTTTATTTGGAGCTAAAGGGTGTGCCAGCGCGCGCACTCTAATACTATATCGACATGTGATCTTTATATTCTTTTTTATTTTATTTATGTTATTAATTTCTCTGACTTTTCGTTTTTTTTTTGTTTTTTATGAAGACGAGAATCTTATGGATGCTCAAATTTAAAAGTACCTTTCAAATTATTAATTTTGCTGAATAATATATTTATATGGATTTAATGCATTGCATCGATAGAATAGTGAAAATCGTATTCTTGGCGATTCTGATTGTAGGAAGAATGACACAGTGGCAATCTTTCTTTCTTTCTTTATTTTTTATTTTTTATTTTTTTCGATTTAAAATGCTATTCAATTTGCTCTGGCTTCCTTGGAGGAAGGAACTCTTCATCTGCTTGTGGTGAAGGATCTCTCTGTCTTTCCTCAATGAAGCAGCCGATTGCCTATGTAGAGGATTGAGACCCTCTCTTACTGGACTCCTATTAATAGTGAAGGATAGTTCAGTTTCCTCCAGTAAGGCCCTTTGTTAGAGAAGAAAACCTGAGTGCGGTTAGATCTTTGCTAAATAATAGTAACAAAAAACAGCAATAACTATCAGAATCAAAATAATGGATGGGAGAGAGAGAGAGAAATTGGATTTCAAATAATGAAAATTGCTTCATGAGCATTGAACCATAAAAGTATGGTTTTGGCATCATCAAATCTGAAGAATAAGCTATAATAGGAATATACCATTGGAATGTTCTAAGAAACATGAACGTGGATATAACTACGCATTCTGTCATCATTGTATAGACATGGCATTTAAATGTTATAGGCATGTGACAAATCTGAATCTTCTTATACAAAAAAAGTAATTAAAAATAATAATAATGAAGGAATATAAGTTTGAACCATAGACATATCACATATGGCAGATCTGAATCTGTGATTAGAGGAACAATAACATTGTTGTTTTTGTTACTGCTGCTGCTGAGTCTGCGATTATAGATAATAACATTGTTGATTTTGTTGTTGAATTTGTGATAACTAGAAAGAAACACATTGTTGGTGTTGTTGAGTACACTGTGATTTGAGATAAATAACATTGTTGTTGTTTCTGAATCCATAGTTATGAGGGTGCTAAGGGAGTGTCAACCTAGTTGAGACGTCCGGGTGCATCTCCTGATCCTTTTACAAGCACTTGTATTCTCGCTTTGCTCTTTGTATAACTCTCTTGTATTTAGAGCTTTCGCTCCTCTCTATTTATTAATACAATGAATCGTTTCCTTTTAAAAAAAGATAATCTGCTAGATACATTTTTCTCTCCTTATTTTCTGTTGCTACAAATTTGTGGTGTTTTAGGTATGAACTATTAATCGATTTTCAACCATATCAGATGAATATCCTCTTGGATTCAAATGATAAAGGAATTTCTATACGGATAGTCGGATGCTAAATTTCAGTTTGTGAGTACCAACAGTTCTGGTTTGATTATCCTGTTTATGTTTTGGTCTACTATTAGGTTTTCAATCAACGTTCATTTCTGTTTATGTGCTTAATGATGGTGGACCTTTATCCACCTGATCGGACTTCATCATACCATTATTTTTCTCCAAGGATGGTGGTTGTTACTTTTCATCCTGTGTTTTCCACCTGATAATAATGATCACGCTTTTAGAGTTCAATATCTGATTCTTGCAGGGTGCAAAAATTATAGATCAAAGAGTATGTATAACACGGTGGGGATATTTTGATGACGAATTTGGTTTTTGGAGTAGGTCTTCCGGTCACCATGAAGAAGACAGTACTCCTGCTGTAAGTGTCAAAAATGATATTTATCGATATTTCCTACCTGTTGCAATGTGCAAATGTTTTCTTCCTAATAGATTTTTTGTTTATATATATATATATATATATATATATATATATATTATTATTAATTGATGAGTTCTCCATCTTGCAGTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAACGCAGTGACCATGGCTCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGATACATTAACCAAAGCCAAAGCCCTTGATGAATCTCATCAGGTTTCAACAACGGCAGCAGCTAAGGTAGCAGACTTGAGTCATAGAATTGGCCTTACTGACATGATAGGTGCGGGCTTTGAAGCGGTTAAAACTATGGATGAGAAGTACCACGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAAAACAGCTGCTGCCGCTGCCGATACCGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCTTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGCCGTGGTCTTGAACATTAG

mRNA sequence

ATGAATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGACCTCGTTGAGATTATTAGCAGATCTGGTGATGATGCCTGCACTGCCTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAAAAATTATAGATCAAAGAGTATGTATAACACGGTGGGGATATTTTGATGACGAATTTGGTTTTTGGAGTAGGTCTTCCGGTCACCATGAAGAAGACAGTACTCCTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAACGCAGTGACCATGGCTCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGATACATTAACCAAAGCCAAAGCCCTTGATGAATCTCATCAGGTTTCAACAACGGCAGCAGCTAAGGTAGCAGACTTGAGTCATAGAATTGGCCTTACTGACATGATAGGTGCGGGCTTTGAAGCGGTTAAAACTATGGATGAGAAGTACCACGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAAAACAGCTGCTGCCGCTGCCGATACCGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCTTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGCCGTGGTCTTGAACATTAG

Coding sequence (CDS)

ATGAATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGACCTCGTTGAGATTATTAGCAGATCTGGTGATGATGCCTGCACTGCCTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAAAAATTATAGATCAAAGAGTATGTATAACACGGTGGGGATATTTTGATGACGAATTTGGTTTTTGGAGTAGGTCTTCCGGTCACCATGAAGAAGACAGTACTCCTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAACGCAGTGACCATGGCTCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGATACATTAACCAAAGCCAAAGCCCTTGATGAATCTCATCAGGTTTCAACAACGGCAGCAGCTAAGGTAGCAGACTTGAGTCATAGAATTGGCCTTACTGACATGATAGGTGCGGGCTTTGAAGCGGTTAAAACTATGGATGAGAAGTACCACGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAAAACAGCTGCTGCCGCTGCCGATACCGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCTTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGCCGTGGTCTTGAACATTAG

Protein sequence

MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH
Homology
BLAST of Bhi07G001294 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.3e-75
Identity = 151/239 (63.18%), Postives = 182/239 (76.15%), Query Frame = 0

Query: 5   GYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLL 64
           GY VEVTGLSP  T  D++DFF+FSG I  ++I+ RSG+ ACTAYV FKD+YSQETA LL
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIV-RSGEQACTAYVMFKDSYSQETAVLL 65

Query: 65  SGAKIIDQRVCITRWGYFDDEFGFWSRSS-GHHEEDSTPASAQRSQFISSAGNAVTMAQE 124
           +GA I+DQRVCITRWG   +EF FW+ +S G  +E  +   AQRS+F  +AG AVT AQE
Sbjct: 66  TGATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEF--NAGEAVTKAQE 125

Query: 125 VVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKTM 184
           VVK MLA G+VLGKD L+KAKA DESH VS  A A+V+ L  RIGLTD I  G EAV+  
Sbjct: 126 VVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMT 185

Query: 185 DEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 243
           D++YHV  T KSA+ ATG+TAAAAA +VV SSYFS GAL++S AL RAAK A+DLG+RG
Sbjct: 186 DQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAASDLGTRG 241

BLAST of Bhi07G001294 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 212.2 bits (539), Expect = 4.6e-55
Identity = 127/253 (50.20%), Postives = 163/253 (64.43%), Query Frame = 0

Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQET 60
           M P GY  +VT LSP+ATEKDV  FF+  G ++LVEI    G DA TAYVTF+DAY+ + 
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQG-DALTAYVTFRDAYALDM 60

Query: 61  ACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTM 120
           A LLSGA I+DQ V I+ +G +  E      ++   EED +    +   F SS G A+T+
Sbjct: 61  AVLLSGATIVDQTVWISVYGVYLHE-----SNNLRQEEDYSVTVTRSDAFASSPGEAITV 120

Query: 121 AQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAV 180
           AQ+VV+TMLA GYVL KD + KAKALDES + S+  A K+A++SH +GLT  I +  E V
Sbjct: 121 AQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELV 180

Query: 181 KTMDEKYHVLQTTKSAI-----------SATGKTAAAAADTVVRSSYFSRGALFMSDALN 240
           ++ DEKYH    TKSA+           + TGK AAAAA +VV S YF+ GAL+ SDAL 
Sbjct: 181 RSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALG 240

Query: 241 RAAKVAADLGSRG 243
           RAAK AA +G  G
Sbjct: 241 RAAKAAAHIGGGG 247

BLAST of Bhi07G001294 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 91/242 (37.60%), Postives = 146/242 (60.33%), Query Frame = 0

Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLLSG 66
           TV+V+ +S +ATE+D+ +FF+FSG I  +E  S + D +  AYVTFKD    ETA LL+G
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSEN-DGSKLAYVTFKDLQGAETAVLLTG 64

Query: 67  AKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMAQEVVK 126
           + I+D  V +T     D +    + +S    ++S  +S+   + +S        A++VV 
Sbjct: 65  STIVDSSVTVTMSP--DYQLPPDALASIESLKESNKSSSPTREDVS----VFRKAEDVVS 124

Query: 127 TMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAG----FEAVKT 186
            M++ G+VLGKD + KAK+LDE HQ+++TA+A+V     RIG T+ I  G     E VK 
Sbjct: 125 GMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKE 184

Query: 187 MDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 245
           +D+K+ V + TKSAI+A  +T + A   ++++ Y   GA +++ A NR +K A ++G + 
Sbjct: 185 VDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKA 239

BLAST of Bhi07G001294 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 93/243 (38.27%), Postives = 144/243 (59.26%), Query Frame = 0

Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLLSG 66
           TV+V+ +S  AT++D+ +FF+FSG I  +E  S + +    AYVTFKD    ETA LLSG
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSET-ERTKLAYVTFKDLQGAETAVLLSG 64

Query: 67  AKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAV-TMAQEVV 126
           A I+D  V ++    +        + S        P  + +S     AG++V   A++VV
Sbjct: 65  ATIVDSSVIVSMAPDY--------QLSPEALASLEPKDSNKS---PKAGDSVLRKAEDVV 124

Query: 127 KTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGF----EAVK 186
            +MLA G++LGKD + KAK++DE HQ+++TA+AKVA    +IG TD I  G     E V+
Sbjct: 125 SSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVR 184

Query: 187 TMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 245
            +D+KY V + TKSAI+A  +T + A   ++++ Y   GA +++ A N+ AK A ++G +
Sbjct: 185 EVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQK 235

BLAST of Bhi07G001294 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 138.3 bits (347), Expect = 8.4e-33
Identity = 89/242 (36.78%), Postives = 132/242 (54.55%), Query Frame = 0

Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLLSG 66
           +V+V  LS  ATE D+ +FF+FSG ++ ++I S       +AYVTFK+    ETA LLSG
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEH----SAYVTFKETQGAETAVLLSG 66

Query: 67  AKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMAQEVVK 126
           A I DQ V I     +                 S PA+       S A + V  A++VV 
Sbjct: 67  ASIADQSVIIELAPNY-----------------SPPAAPHAETQSSGAESVVQKAEDVVS 126

Query: 127 TMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGF----EAVKT 186
           +MLA G++LGKD + KAKA DE H  ++TA A VA L  +IGL+  + AG     E +K 
Sbjct: 127 SMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKA 186

Query: 187 MDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 245
           +D+ + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+ A ++G + 
Sbjct: 187 VDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKT 227

BLAST of Bhi07G001294 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31
Identity = 89/242 (36.78%), Postives = 132/242 (54.55%), Query Frame = 0

Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLLSG 66
           +V+V  LS  ATE D+ +FF+FSG ++ ++I S       +AYVTFK+    ETA LLSG
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEH----SAYVTFKETQGAETAVLLSG 66

Query: 67  AKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMAQEVVK 126
           A I DQ V I     +                 S PA+       S A + V  A++VV 
Sbjct: 67  ASIADQSVIIELAPNY-----------------SPPAAPHAETQSSGAESVVQKAEDVVS 126

Query: 127 TMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGF----EAVKT 186
           +MLA G++LGKD + KAKA DE H  ++TA A VA L  +IGL+  + AG     E +K 
Sbjct: 127 SMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKA 186

Query: 187 MDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 245
           +D+ + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+ A ++G + 
Sbjct: 187 VDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKT 227

BLAST of Bhi07G001294 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 62/235 (26.38%), Postives = 99/235 (42.13%), Query Frame = 0

Query: 8   VEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQETACLLSGA 67
           V VT +SP+ TEK + DFF+F G +    I +    +  TA + F+   + +TA LL  A
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVS--NISTEKSGETQTAKIQFERPSATKTALLLQDA 64

Query: 68  KIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMAQE---- 127
            +   ++ IT                    ED   AS         AG      QE    
Sbjct: 65  LLGQNKIQIT-------------------SEDGGAASTTDQ---GGAGGDQAARQEDKPR 124

Query: 128 --VVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 187
             ++  +L+ GY L   TL K+  LD+S+ VS+                 ++ +    V+
Sbjct: 125 SAIISELLSRGYHLSDVTLEKSIQLDQSYGVSSK-------------FKGILESALSGVR 184

Query: 188 TMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAA 237
           +++E+YHV   T+ A     K   A +D + R+S  S  + +   AL  AA  +A
Sbjct: 185 SVNERYHV---TEKANEVDNK--FAISDKLNRTS--SLVSTYFHKALETAAGTSA 195

BLAST of Bhi07G001294 vs. ExPASy TrEMBL
Match: A0A0A0KSM6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.0e-120
Identity = 226/245 (92.24%), Postives = 237/245 (96.73%), Query Frame = 0

Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQET 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAI+LVEI+ RSG+DACTAYVTFKDAYSQET
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIV-RSGEDACTAYVTFKDAYSQET 60

Query: 61  ACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTM 120
           ACLLSGAKI+DQRVCITRWG+FDDEFGFWSR  GH EEDSTPASAQRSQFISSAGNAVTM
Sbjct: 61  ACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTM 120

Query: 121 AQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAV 180
           AQEVVKTMLAMGYVLGKDTLTKAKA DESHQVS TAAAKVADLSHRIGLTDM+GAG+EAV
Sbjct: 121 AQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAV 180

Query: 181 KTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGS 240
           K++DEKYHVL+TTKSAISATG+TAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGS
Sbjct: 181 KSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGS 240

Query: 241 RGLEH 246
           RGLEH
Sbjct: 241 RGLEH 244

BLAST of Bhi07G001294 vs. ExPASy TrEMBL
Match: A0A5D3CVI0 (Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00120 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 226/245 (92.24%), Postives = 235/245 (95.92%), Query Frame = 0

Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQET 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAI+LVEI+ RSGDDACTAYVTFKDAYSQET
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIV-RSGDDACTAYVTFKDAYSQET 60

Query: 61  ACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTM 120
           ACLLSGAKI+DQRVCITRWG+FDDEFGFWSR  GH EEDST ASAQRSQFISSAGNAVTM
Sbjct: 61  ACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTM 120

Query: 121 AQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAV 180
           AQEVVKTMLAMGYVLGKDT TKAKA DESHQVS TAAAKVADLSHRIGLTDM+GAGFEAV
Sbjct: 121 AQEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAV 180

Query: 181 KTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGS 240
           K++DEKYHVL+TTKSAISATG+TAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGS
Sbjct: 181 KSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGS 240

Query: 241 RGLEH 246
           RGLEH
Sbjct: 241 RGLEH 244

BLAST of Bhi07G001294 vs. ExPASy TrEMBL
Match: A0A1S3BET5 (binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 226/245 (92.24%), Postives = 235/245 (95.92%), Query Frame = 0

Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQET 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAI+LVEI+ RSGDDACTAYVTFKDAYSQET
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIV-RSGDDACTAYVTFKDAYSQET 60

Query: 61  ACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTM 120
           ACLLSGAKI+DQRVCITRWG+FDDEFGFWSR  GH EEDST ASAQRSQFISSAGNAVTM
Sbjct: 61  ACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTM 120

Query: 121 AQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAV 180
           AQEVVKTMLAMGYVLGKDT TKAKA DESHQVS TAAAKVADLSHRIGLTDM+GAGFEAV
Sbjct: 121 AQEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAV 180

Query: 181 KTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGS 240
           K++DEKYHVL+TTKSAISATG+TAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGS
Sbjct: 181 KSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGS 240

Query: 241 RGLEH 246
           RGLEH
Sbjct: 241 RGLEH 244

BLAST of Bhi07G001294 vs. ExPASy TrEMBL
Match: A0A6J1G2B1 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450009 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 217/245 (88.57%), Postives = 233/245 (95.10%), Query Frame = 0

Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQET 60
           MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAI+LVEI+ RSG+DACTAYV+FKDAYSQET
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIV-RSGEDACTAYVSFKDAYSQET 60

Query: 61  ACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTM 120
           ACLLSGA I+DQRVCITRWG+FD+EF FWSR SG+HEED TP SAQRSQF+S+AG AV+M
Sbjct: 61  ACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSM 120

Query: 121 AQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAV 180
           AQ+VVKTMLAMGYVLGKDT TKAKA DESHQVS TAAAKVADLS+RIGLTDMIGAG+EA 
Sbjct: 121 AQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAA 180

Query: 181 KTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGS 240
           KTMDEKYHVLQTTKSAISATG+TAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGS
Sbjct: 181 KTMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGS 240

Query: 241 RGLEH 246
           RGLEH
Sbjct: 241 RGLEH 244

BLAST of Bhi07G001294 vs. ExPASy TrEMBL
Match: A0A6J1JE77 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115
Identity = 222/245 (90.61%), Postives = 233/245 (95.10%), Query Frame = 0

Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIISRSGDDACTAYVTFKDAYSQET 60
           M+PGGYTVEVTGLSPKA EKDVLDFFAF G I+LVEII RSG+DACTAYVTFKDAYSQET
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEII-RSGEDACTAYVTFKDAYSQET 60

Query: 61  ACLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTM 120
           ACLLSGA I+DQRVCITRWG+FDDEFGFWSR SG+HEEDST ASAQRSQFISSAGNAVTM
Sbjct: 61  ACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST-ASAQRSQFISSAGNAVTM 120

Query: 121 AQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAV 180
           AQEVVKTML+MGYVLGKD LTKAK  DESHQVS TAAAKVADLSHRIGLTDMIGAGFEAV
Sbjct: 121 AQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAV 180

Query: 181 KTMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGS 240
           KTMDEKYHVLQTTKSAISATG+TAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGS
Sbjct: 181 KTMDEKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGS 240

Query: 241 RGLEH 246
           RG+EH
Sbjct: 241 RGVEH 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G14340.12.3e-7563.18RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G01210.14.6e-5550.20RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G46870.11.5e-3437.60RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G17720.12.6e-3438.27RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G16840.18.4e-3336.78binding partner of acd11 1 [more]
Match NameE-valueIdentityDescription
Q9LFD51.2e-3136.78Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1[more]
P872163.3e-0526.38Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KSM67.0e-12092.24RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV... [more]
A0A5D3CVI03.5e-11992.24Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3BET53.5e-11992.24binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1[more]
A0A6J1G2B11.1e-11588.57binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450009 PE... [more]
A0A6J1JE771.8e-11590.61binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 7..78
e-value: 0.005
score: 26.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 10..73
e-value: 3.9E-5
score: 23.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 6..73
score: 8.774036
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 5..77
e-value: 1.3E-7
score: 33.4
NoneNo IPR availablePANTHERPTHR32343:SF26RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..243
NoneNo IPR availablePANTHERPTHR32343SERINE/ARGININE-RICH SPLICING FACTORcoord: 1..243
IPR034360Vip1-like, RNA recognition motif, plantCDDcd12269RRM_Vip1_likecoord: 8..77
e-value: 7.44633E-32
score: 109.842
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 5..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M001294Bhi07M001294mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding