Bhi07G000711 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000711
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	serine/threonine-protein phosphatase 6 regulatory subunit 3
Location	chr7: 28725481 .. 28725967 (-)
RNA-Seq Expression	Bhi07G000711
Synteny	Bhi07G000711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCATTCGTCGTAGTTTCGTTTTTTCCCTTTGAAGTTTTCTTGATTGAGTCAGGTGCTGAAGAGTTGACTTGTTATGTTCATATGCGTTTGGTTCCCAAAGTAATTCTAGAGTTACACTGCATGATTGTGTTTGGTTCCCAACATACAGCTGCGTTTTAGTCAAAAAAATTTCTTTGAGACTTCTTTATTCTACAGTTTAGCAATTAAACTGCCATCTCATACATTCCCCCTTTTGCAGGCTCATCAAGATGTACTGCGCCAATTAGTTGATTTAATTGGAATTACATCTATTATGGAGGTAATGTCGGCCTTTGAAGGCTTCCCCATAAAAAATACTTTAAATGCTGCTTAGTTTGCACTCTAATAAGAAATGGAGTTTTCTCTGCAGGTTTTGGTGCGACTTGTTGTTGCTGATGATCATGTCTATCCAAATTTTATGGATGTGATGCAATGGTTGTCGAGAGTGATATGCTGGAAATGA

mRNA sequence

ATGTCAGCATTCGTCGTAGTTTCGTTTTTTCCCTTTGAAGTTTTCTTGATTGAGTCAGGTGCTGAAGAGTTGACTTGTTATGTTCATATGCGTTTGGTTCCCAAAGCTCATCAAGATGTACTGCGCCAATTAGTTGATTTAATTGGAATTACATCTATTATGGAGGTTTTGGTGCGACTTGTTGTTGCTGATGATCATGTCTATCCAAATTTTATGGATGTGATGCAATGGTTGTCGAGAGTGATATGCTGGAAATGA

Coding sequence (CDS)

ATGTCAGCATTCGTCGTAGTTTCGTTTTTTCCCTTTGAAGTTTTCTTGATTGAGTCAGGTGCTGAAGAGTTGACTTGTTATGTTCATATGCGTTTGGTTCCCAAAGCTCATCAAGATGTACTGCGCCAATTAGTTGATTTAATTGGAATTACATCTATTATGGAGGTTTTGGTGCGACTTGTTGTTGCTGATGATCATGTCTATCCAAATTTTATGGATGTGATGCAATGGTTGTCGAGAGTGATATGCTGGAAATGA

Protein sequence

MSAFVVVSFFPFEVFLIESGAEELTCYVHMRLVPKAHQDVLRQLVDLIGITSIMEVLVRLVVADDHVYPNFMDVMQWLSRVICWK

Homology

[Close]

BLAST of Bhi07G000711 vs. TAIR 10
Match: AT3G45190.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-15
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 26  CYVHMRLVP-----KAHQDVLRQLVDLIGITSIMEVLVRLVVADDHVYPNFMDVMQWLS 80
           C +  + VP     KAHQ+V +QLVDLIGITSIMEVL+RLV ADDHVYPN +DVMQWL+
Sbjct: 131 CLMLRKTVPLMNYVKAHQNVFQQLVDLIGITSIMEVLIRLVGADDHVYPNHLDVMQWLA 189

[Close]

BLAST of Bhi07G000711 vs. TAIR 10
Match: AT1G07990.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-14
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 35  KAHQDVLRQLVDLIGITSIMEVLVRLVVADDHVYPNFMDVMQWLS 80
           K HQ+V  QLVDLIGITSIMEVLVRLV ADD VYPNF+DVMQWL+
Sbjct: 145 KGHQNVFCQLVDLIGITSIMEVLVRLVGADDQVYPNFLDVMQWLA 189

[Close]

BLAST of Bhi07G000711 vs. TAIR 10
Match: AT2G28360.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-12
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 35  KAHQDVLRQLVDLIGITSIMEVLVRLVVADDHVYPNFMDVMQWLS 80
           K H +V  QLVDLIGITSIMEVLVRLV ADDHVYPNF DVM++L+
Sbjct: 145 KGHGNVFSQLVDLIGITSIMEVLVRLVGADDHVYPNFPDVMRYLA 189

[Close]

BLAST of Bhi07G000711 vs. TAIR 10
Match: AT1G30470.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 63.5 bits (153), Expect = 9.2e-11
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 35  KAHQDVLRQLVDLIGITSIMEVLVRLVVADDHVYPNFMDVMQWL 79
           K HQ++L+QLVDLIGITSIMEVL RLV  D+H+Y N+   MQW+
Sbjct: 145 KDHQEILKQLVDLIGITSIMEVLKRLVGTDEHLYSNYTSAMQWI 188

[Close]

BLAST of Bhi07G000711 vs. TAIR 10
Match: AT1G30470.3 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 63.5 bits (153), Expect = 9.2e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 22  EELTCYVHMRLV-----PKAHQDVLRQLVDLIGITSIMEVLVRLVVADDHVYPNFMDVMQ 79
           E  TC + M L       + HQ++L+QLVDLIGITSIMEVL RLV  D+H+Y N+   MQ
Sbjct: 80  EIFTCEIEMILKTLVEDEEDHQEILKQLVDLIGITSIMEVLKRLVGTDEHLYSNYTSAMQ 139

[Close]

BLAST of Bhi07G000711 vs. ExPASy TrEMBL
Match: A0A5D3CSA4 (Serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00130 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 11  PFEVFLIESGAEELTCYVHMRLVP-----KAHQDVLRQLVDLIGITSIMEVLVRLVVADD 70
           P    L    ++ + C +  + VP     +AH+DVLRQLVDLIGITSIMEVLVRLV ADD
Sbjct: 108 PHSALLAGYFSKVIICLMIRKTVPLMHYVQAHRDVLRQLVDLIGITSIMEVLVRLVGADD 167

Query: 71  HVYPNFMDVMQWLS 80
           HVYPNFMDVMQWLS
Sbjct: 168 HVYPNFMDVMQWLS 181

[Close]

BLAST of Bhi07G000711 vs. ExPASy TrEMBL
Match: A0A6J1JEC7 (serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483669 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 11  PFEVFLIESGAEELTCYVHMRLVP-----KAHQDVLRQLVDLIGITSIMEVLVRLVVADD 70
           P    L    ++ + C +  + VP     +AH+DVLRQLVDLIGITSIMEVLVRLV ADD
Sbjct: 116 PHSALLAGYFSKVIICLMIRKTVPLMHYVQAHRDVLRQLVDLIGITSIMEVLVRLVGADD 175

Query: 71  HVYPNFMDVMQWLS 80
           HVYPNFMDVMQWLS
Sbjct: 176 HVYPNFMDVMQWLS 189

[Close]

BLAST of Bhi07G000711 vs. ExPASy TrEMBL
Match: A0A6J1JDZ8 (serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483669 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 11  PFEVFLIESGAEELTCYVHMRLVP-----KAHQDVLRQLVDLIGITSIMEVLVRLVVADD 70
           P    L    ++ + C +  + VP     +AH+DVLRQLVDLIGITSIMEVLVRLV ADD
Sbjct: 116 PHSALLAGYFSKVIICLMIRKTVPLMHYVQAHRDVLRQLVDLIGITSIMEVLVRLVGADD 175

Query: 71  HVYPNFMDVMQWLS 80
           HVYPNFMDVMQWLS
Sbjct: 176 HVYPNFMDVMQWLS 189

[Close]

BLAST of Bhi07G000711 vs. ExPASy TrEMBL
Match: A0A0A0KGF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141380 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 11  PFEVFLIESGAEELTCYVHMRLVP-----KAHQDVLRQLVDLIGITSIMEVLVRLVVADD 70
           P    L    ++ + C +  + VP     +AH+DVLRQLVDLIGITSIMEVLVRLV ADD
Sbjct: 116 PHSALLAGYFSKVIICLMIRKTVPLMHYVQAHRDVLRQLVDLIGITSIMEVLVRLVGADD 175

Query: 71  HVYPNFMDVMQWLS 80
           HVYPNFMDVMQWLS
Sbjct: 176 HVYPNFMDVMQWLS 189

[Close]

BLAST of Bhi07G000711 vs. ExPASy TrEMBL
Match: A0A6J1FU75 (serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448463 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 11  PFEVFLIESGAEELTCYVHMRLVP-----KAHQDVLRQLVDLIGITSIMEVLVRLVVADD 70
           P    L    ++ + C +  + VP     +AH+DVLRQLVDLIGITSIMEVLVRLV ADD
Sbjct: 116 PHSALLAGYFSKVIICLMIRKTVPLMHYVQAHRDVLRQLVDLIGITSIMEVLVRLVGADD 175

Query: 71  HVYPNFMDVMQWLS 80
           HVYPNFMDVMQWLS
Sbjct: 176 HVYPNFMDVMQWLS 189

The following BLAST results are available for this feature:

BLAST of Bhi07G000711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45190.1	3.6e-15	67.80	SIT4 phosphatase-associated family protein	[more]
AT1G07990.1	3.0e-14	82.22	SIT4 phosphatase-associated family protein	[more]
AT2G28360.1	1.3e-12	77.78	SIT4 phosphatase-associated family protein	[more]
AT1G30470.1	9.2e-11	65.91	SIT4 phosphatase-associated family protein	[more]
AT1G30470.3	9.2e-11	53.23	SIT4 phosphatase-associated family protein	[more]

BLAST of Bhi07G000711 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi07G000711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSA4	5.2e-14	63.51	Serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 OS=Cucumi...	[more]
A0A6J1JEC7	5.2e-14	63.51	serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 OS=C...	[more]
A0A6J1JDZ8	5.2e-14	63.51	serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X2 OS=C...	[more]
A0A0A0KGF5	5.2e-14	63.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141380 PE=3 SV=1	[more]
A0A6J1FU75	5.2e-14	63.51	serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 OS=C...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007587	SIT4 phosphatase-associated protein family	PANTHER	PTHR12634	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	coord: 35..79
None	No IPR available	PANTHER	PTHR12634:SF32	SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1	coord: 35..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000711	Bhi07M000711	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043666	regulation of phosphoprotein phosphatase activity
molecular_function	GO:0019903	protein phosphatase binding
molecular_function	GO:0019888	protein phosphatase regulator activity