Bhi07G000703 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000703
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Glycine-rich RNA-binding family protein
Location	chr7: 28498149 .. 28503794 (-)
RNA-Seq Expression	Bhi07G000703
Synteny	Bhi07G000703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCGATTTCTATTGTTTTTCTAACACATGTATTTACTATAGACATAATTTTTTTTTAAAATGAGAACTATAGACATGCTTGAAAGTTGAAACATACTTCAACTTTTTTAAATTAGAAAAAAAAAAAACATAAACAAAAACAACCGACTTCAAAACTAGTACTTTAGATGACGGTTTTGATTTAAAAATGAAAAATAAATAAATATCGCGTGTAGTTGCAAATATATTTTCTAGGGTTCTTCAGGAATCTTAAGAAACAAGACGAAGACTCAATTCTATCAGAGCATTTCACTCTAACCGCACGAACTAGGTATTACCCTTTCTCCACTTTCGTCATTTTCTCCAAATTCTCAGTATCAATTGTTCTTTAGGGTAGGAAACATACTAGATGATTTTCGTTCTCGCCGATTTTCGTCTTGAATTTTGCTTCGATTTCTCAAATTTTACCTTGGTTTTTGCTGTGCAGGAGGATTCTTCTGTCTGTAATTAGGAGATTGATATGGCTGGAAGAGAAGAGTACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGATTCGGCAAAATTATCGATTCTCAGGTTACCCTTGTTTATATATATTCGTCGATTTATGGTTTGATCTGTATTGCTGAAAACCGAAGCAATTGGACTTCGTGTAAGCTGAACACATTGGAATAAGTTATTTCTTATACGAGAAGGAAACAGAGGAAATTGTATAATCGGTGTTATTTCGTGTGAATCTTCATATGAAGAATACAATTTCTAAATTTACACCCCTTTTTCCTCTAATTAGCTTTTCCCTCTGATGATAGCATGTCAAAACACCACAGATGAACTGCAAGATTAACTTTTACCATCCGAAGCCATAATTTTTTGTTTTCTCAACATTGTTTTATTACAACTTTAATTTTTCTCCAAACTCTTCTCTTTCTGATGATGTTTCTTTTTCCCCTTGTGAATGAGGATGCTGTTAATGAACTTTTTGGGAAGCGGTTTCAGTATCCATGTAAAGTTGAATGTTCCAAGATGCTGAAGGTCATAGGCTTGTATGTGCTTAAGTATTATTTGATTTAGATCTGCTGGTTAAGAAAAAGTGCTACGTTACCATCTGGATATTGGGGATATGGTTGCCTGCAAACTCAATCTTGTGCTCTAGCTGATTGGGGTTTGGTAGGATTTTAATTTGCAAATTCAGCGACTAATTGTTTCTGTGGGATAAAAGAACTTGACATTCATGGTTTTAAACCAGAGGAACTATTAACAAGCAATGTGTTGATGCCTGCTCGAGCAAACCTTTCTTGTTTTATTGTTCCTTGATGTTTTGATAAGGACACTGAAGTCACTAAAATGTTTAAGGATTTGATTGATAAACGTTCTAGTATTTTCTTGGAGAATTTTATCTTGCTTTGGATGATTATTAAACCCAACATCTCATCTTTGGCTTACCCTACTTACCAATGGTATGACAAAAAGTCTAAAAGTTAATGATGAAGTTTATGTGGTTATTCGAGATGACGTATGGGGCAAAAAGTTTGGCTAGATTGCTATATTGACTCAACTAATGAGTTTGCTAAGTCATCTAATCCCAAAAAGTTCTCAGAAGACATATGTCATGAATGGAACATTTTGTTGTATGAACTACTGGCTGCTTCTTTGTAATGCTTTCTCCGTGTTCCTGTCCACGACTAATTATTATCGAAGTGAGAGATTGCTGGTTTCTCATTTGCTAGTTTGACTGGTGTTGAGAGTTGTCAGTTTTATTTAAGATGAAGAATACGTAAAATGGTGCATCTTTTTTGGCTAAGATTTATGATGGCATGCAAAGGTACAGTTTTGGGAGATCAATAACCATTTCATTCTTTTCAGTGGACACTACATCTTTGAATTTCATTTTTCTGGGATGAAGTTGCCGGAGTCCCCTACTCTTCCAGGCATGCTCAGAAAGTTATTTGCACCGGTTTTTGTTTAGCAGCTTATGTGGCTAGAAATTGGACTAGTGATGCCAGGCTTAGCAGCTCAGACATTTTTTGAAGAATTGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGTTTTCCTCATCGTATGATGTCAGCTGGATCGTAGATGTCAGTTTGAGGATCTTTTCTGATCAGTTGTTGTCTTCTCTGGTGAGCTTGTTAAGTACTATGCCGTGGACAGGACTGTGGACATTGATGTGGATATTGTTGTTATCCAAAGCTTCCAGAGCTCTTAAGGCCTCTGATGTTACTATGTTAGACTCTGTTTTCTGTTATGACCGAGCATTATTAATGTCTATTTGTTGGGTATAGTACTGCAGTCTGCAGGGGAGTGATTGGATCTGAAGCTAAATTTGAGTTCCTATAGGTGCAGTGTTGCAGTTCCTATATAGAGGAATGGATTTAGGTTGTGGCAACATGAGAAATTTTGGAGCTGTAGTTTTTCATTCGTTTGTTTTCATCCTTTTCCTGTTGTTTGGAGTTGTTTCTCAAGATTGATCAAGAATGCTGCTGTTTTGTTTTCCTTTTTTGTGGTGTCGATGTGCTAGTTTTCTCATTTTGTACTCATTGACAGTCTTTGTCTTAACAGAGTTTGAATTCGTCGATTATTGATTCTATTTAAACTTAAGAGGGGGTTGAATATGAATATGTACCTAGTTAAGAATGGTTGCCATGCCAGTTTTGTCCTCATCAAGTTTTCTAGTACAGCCTCTTGTGTCCACAAACTGATGGGATCTCTATTTCAGAATAAGTTGGCATCTCCATTGCTTGAAATTATACTGTCTGGCGAAGCTTGCCTACGTCTCCTAGAGCATTCATCCTGGAAGATATGTTGTTTAAGGATTCATCTTTCTTTCTTGAGATTTATTCCACCATCTACTTCACATCACATCCCAATATGATTATGTGACAGCTCTGTTGAGGCTAATCCCTTAGTTGGAGTAATACACATATCCAATGAAGTGTTTGTACTGGGTTTTTTTTTTTGAGTTAAGATTGACTTTGAGGGCCATTTTTGGATGTCTGACTGTACAGAAGAAGCCATGTAGCCATTTTTTAATGGAATTATTTCTTTTGAATAAAAGGGGACCATAGTCTAAGATACTCTCACTTCAGAAGATAGACCTAAAGACGTGCAGGTTCTTTTGTTTTGTTAAGGAATTGTGTAACATGTTGCAATGAGTTCTTCATAAACGGACAAAAAAGTAAGTTGTCAGACTGTTTAGTTATATATTTTAAAACATTTTTATGTTGTTATTATCAACTACTTTAGAACGAATTCTCTTTGATGTTTTACTTTTTATCGGGCATACAGCATGTGATAGGCTGAACTTCATCACCAGCTTGTACCCGTAACTTATTCTGTTATTCTGATTCTCTAATGGAATGTAGGTTTGTTGCCATGTTTTCTGAATGATAATTTGGTGGAGTCTTAACCTCTATTTTTTGTAGCTGTTGTTGGAGTTTGAAACCTATAGATCATGGGAACTGTTTGGTATTGAATTTATATCTCTTGACATTGTCACAATTGTATTTATGGGTTCAAGCTTCAAGCCCAAAATTGGGTTTAATTTGCCACGCTCTTAGATTAACTTCGTGTCCATTAACTCCAAACTTTTATGGGTTGTCAACTGGGATCTTAAATACCAAAACAAAACACCTTATATTGGTGGTCGGGATGTGGAGTTCATCTTGAAGCCTGTCATCTTTGAACATTGAGGGGGTGGGAATTCTGGGCTATTTATTTATCTTTAATTGTGGTGGTCTTCATCCCTGTTTCTTTGATGCTGTTTTTTGTTACATTTGACAAATTTACTTTATAATGTAGGGTTAGACTATGCTGATGGCTGGTAGTGGTAGGTTTCAAGTTTTCACTTGGTATACATTATTAGCATGGTACTTTAGTAGCTCTGGTTTAATCACTTGGTTTAAGTTTTATTGGCTGTTCAACTGATTTGCTCTTTGGCATTCCTGTAGATAATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACCGGTGGCAGGGGTAGTTATGGGGGTGGGGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTGCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGCTATGAAGGTGGTGGGCGCTTTGGAGATAGAGATCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGCGATCGCTATGTTAGTGAAAGGTACTGACCGATATTTTCTGTGGTTGTATATAAATTTATGTGTTTGAAATAATTATCACTGGGAAATGATAAATTGGCAGAATAGGGATCCAATATCGTTCTTTTGCTGATTGTCAATGACTGCTCAATTATTTCCTTGCAGTATCATATAATTAATCAATCCTCTCAGTTCTGATTTTATACATAAATCTGCAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATAATAATGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGGGGGTACTATAGAGATGGTGGACCTCGTGGAGTTGATAAGTATGGAAGTGGCGGTCCAGCACGCAACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTACGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGAATGTTTTTATTGTGTAAGCACATTATCAGGTTTATCTAAAGTACCACATGCTCGGTGTTGTGCTGTTAGTTATCTAGGATGTAGTTGGAGTACCGTGGCCTGACTGACAGACAGATTGTTGTGGTTTCGTGTAGCTTTAATGTATCTGAGTTTTTGTTCAGCGACAGATAAATGTTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACCATTTTGTGGTTCCAAAAATGTTGAGGTGAATCTTGCAGGGAGTGACATAAGAAGGTCGAGTGGAGGACTCTTAAGGCTCGTTTGATTCATAAGTTGGGTTCATAAACAAATTAGTAGAGATACAAGTCTAGAGGGCAGTGGCACCGTATTTGTGTATTTAGTAGCACCTTTTACTGTGCAGAAAAGAGGTATGATAGAGGAAGTAAAAATGAGAGATGAAGCTTGGAAATTGGCCTCCCAATAAGCACCAACCAACAACAAACTCTGCTGTCAGTTAAGAGTGAATGAAAGAGAGACTCAAATTGAAGACATATGGTTTGGTTTGGCCCTCAATTGGAATCACTGACTTGCTTTTCTCAATATATTACTGTTTTCTATATTTCTTCCACTCTCTTGTTCCTGATTCTCTTTAACTTTAGGGATGATGAGAAAGAAAAATGTGCGCATATTTTGAGTGCGCTCTATATTTCCA

mRNA sequence

CGTCGATTTCTATTGTTTTTCTAACACATGTATTTACTATAGACATAATTTTTTTTTAAAATGAGAACTATAGACATGCTTGAAAGTTGAAACATACTTCAACTTTTTTAAATTAGAAAAAAAAAAAACATAAACAAAAACAACCGACTTCAAAACTAGTACTTTAGATGACGGTTTTGATTTAAAAATGAAAAATAAATAAATATCGCGTGTAGTTGCAAATATATTTTCTAGGGTTCTTCAGGAATCTTAAGAAACAAGACGAAGACTCAATTCTATCAGAGCATTTCACTCTAACCGCACGAACTAGGAGGATTCTTCTGTCTGTAATTAGGAGATTGATATGGCTGGAAGAGAAGAGTACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGATTCGGCAAAATTATCGATTCTCAGATAATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACCGGTGGCAGGGGTAGTTATGGGGGTGGGGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTGCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGCTATGAAGGTGGTGGGCGCTTTGGAGATAGAGATCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGCGATCGCTATGTTAGTGAAAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATAATAATGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGGGGGTACTATAGAGATGGTGGACCTCGTGGAGTTGATAAGTATGGAAGTGGCGGTCCAGCACGCAACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTACGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGAATGTTTTTATTGTGTAAGCACATTATCAGGTTTATCTAAAGTACCACATGCTCGGTGTTGTGCTGTTAGTTATCTAGGATGTAGTTGGAGTACCGTGGCCTGACTGACAGACAGATTGTTGTGGTTTCGTGTAGCTTTAATGTATCTGAGTTTTTGTTCAGCGACAGATAAATGTTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACCATTTTGTGGTTCCAAAAATGTTGAGGTGAATCTTGCAGGGAGTGACATAAGAAGGTCGAGTGGAGGACTCTTAAGGCTCGTTTGATTCATAAGTTGGGTTCATAAACAAATTAGTAGAGATACAAGTCTAGAGGGCAGTGGCACCGTATTTGTGTATTTAGTAGCACCTTTTACTGTGCAGAAAAGAGGTATGATAGAGGAAGTAAAAATGAGAGATGAAGCTTGGAAATTGGCCTCCCAATAAGCACCAACCAACAACAAACTCTGCTGTCAGTTAAGAGTGAATGAAAGAGAGACTCAAATTGAAGACATATGGTTTGGTTTGGCCCTCAATTGGAATCACTGACTTGCTTTTCTCAATATATTACTGTTTTCTATATTTCTTCCACTCTCTTGTTCCTGATTCTCTTTAACTTTAGGGATGATGAGAAAGAAAAATGTGCGCATATTTTGAGTGCGCTCTATATTTCCA

Coding sequence (CDS)

ATGGCTGGAAGAGAAGAGTACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGATTCGGCAAAATTATCGATTCTCAGATAATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACCGGTGGCAGGGGTAGTTATGGGGGTGGGGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTGCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGCTATGAAGGTGGTGGGCGCTTTGGAGATAGAGATCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGCGATCGCTATGTTAGTGAAAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATAATAATGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGGGGGTACTATAGAGATGGTGGACCTCGTGGAGTTGATAAGTATGGAAGTGGCGGTCCAGCACGCAACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTACGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY

Homology

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BLAST of Bhi07G000703 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 294.7 bits (753), Expect = 8.2e-80
Identity = 179/314 (57.01%), Postives = 214/314 (68.15%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGG 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGGG
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 DRSARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARARLGDSDRGDRFAG----- 180
            R   +DECFKCGR+GHWARDCPS GGGRG   GG S  A A  G   R DR+A      
Sbjct: 121 GR-VGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYV 180

Query: 181 DNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRF-GSSRYNNDSD 240
           D  RY+DDRY+G  R+G RDRFDS      Y  RDRY S+RY    DRF G  RY+  SD
Sbjct: 181 DRERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSD 240

Query: 241 RFPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---NEGRSYRNRP-APYDRPSRGG 288
           R+P   Y K R + RD  P  G D+YG   +GGP R    EGR +R+R  APY+RPSR G
Sbjct: 241 RYPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSG 300

[Close]

BLAST of Bhi07G000703 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 268.1 bits (684), Expect = 8.3e-72
Identity = 161/302 (53.31%), Postives = 197/302 (65.23%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQ 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+             +
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-------------E 127

Query: 123 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSD-RGDRFAGDN---------- 182
           DECFKC R GHWARDCPS G  R R       R+R+GD D   DR+ GD           
Sbjct: 128 DECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLERERERER 187

Query: 183 --NRYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSD 242
             +RY+D R +  GGR+  RDRFDS    +KY  RD Y  ERY P GDRF S RY     
Sbjct: 188 EFDRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEH 247

Query: 243 RFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARNEGRSYRNRPAPYDRPSR-GGRPSSFD 288
                  G++R Y RD   R   D+YG  GP R+EGR YR+RP PYDRPSR GGRPSS++
Sbjct: 248 HLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYE 292

[Close]

BLAST of Bhi07G000703 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 268.1 bits (684), Expect = 8.3e-72
Identity = 161/302 (53.31%), Postives = 197/302 (65.23%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQ 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+             +
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-------------E 127

Query: 123 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSD-RGDRFAGDN---------- 182
           DECFKC R GHWARDCPS G  R R       R+R+GD D   DR+ GD           
Sbjct: 128 DECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLERERERER 187

Query: 183 --NRYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSD 242
             +RY+D R +  GGR+  RDRFDS    +KY  RD Y  ERY P GDRF S RY     
Sbjct: 188 EFDRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEH 247

Query: 243 RFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARNEGRSYRNRPAPYDRPSR-GGRPSSFD 288
                  G++R Y RD   R   D+YG  GP R+EGR YR+RP PYDRPSR GGRPSS++
Sbjct: 248 HLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYE 292

[Close]

BLAST of Bhi07G000703 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 135.2 bits (339), Expect = 8.4e-32
Identity = 111/293 (37.88%), Postives = 154/293 (52.56%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGG 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY    R    GG GGG
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDR-DRSRPSGGRGGG 120

Query: 121 DRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRY-- 180
           D       CFKCG+ GH+AR+CPS     G G            S + DR++  ++RY  
Sbjct: 121 D-------CFKCGKPGHFARECPSESSRDGGG----------RFSSKDDRYSSKDDRYGA 180

Query: 181 VDDRYEG-GGRFGDR-DRFDS-----SSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDS 240
            DDRY     R+G + DR+ S     SS+D++YGSRD         GG R+G  R     
Sbjct: 181 KDDRYGAKEDRYGAKDDRYSSKDDRYSSKDDRYGSRD--------GGGSRYGPDRSGE-- 240

Query: 241 DRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGG 280
                    +  G  RDGG RG      GG         R+  APYDRP  GG
Sbjct: 241 ---------RAGGRSRDGGSRG----APGGE--------RHSRAPYDRPRAGG 243

[Close]

BLAST of Bhi07G000703 vs. TAIR 10
Match: AT4G39260.2 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-24
Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +  L+  F++FG +IDS+I+ ++ +GR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 66  REMHGQEFGERIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGGG 116
            EM+G+E   R+I+VN+A+ +   G     G  GGGY +GG G Y GGGGGG
Sbjct: 65  EEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGG 116

[Close]

BLAST of Bhi07G000703 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-78
Identity = 179/314 (57.01%), Postives = 214/314 (68.15%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGG 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGGG
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 DRSARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARARLGDSDRGDRFAG----- 180
            R   +DECFKCGR+GHWARDCPS GGGRG   GG S  A A  G   R DR+A      
Sbjct: 121 GR-VGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYV 180

Query: 181 DNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRF-GSSRYNNDSD 240
           D  RY+DDRY+G  R+G RDRFDS      Y  RDRY S+RY    DRF G  RY+  SD
Sbjct: 181 DRERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSD 240

Query: 241 RFPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---NEGRSYRNRP-APYDRPSRGG 288
           R+P   Y K R + RD  P  G D+YG   +GGP R    EGR +R+R  APY+RPSR G
Sbjct: 241 RYPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSG 300

[Close]

BLAST of Bhi07G000703 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-70
Identity = 161/302 (53.31%), Postives = 197/302 (65.23%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQ 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+             +
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-------------E 127

Query: 123 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSD-RGDRFAGDN---------- 182
           DECFKC R GHWARDCPS G  R R       R+R+GD D   DR+ GD           
Sbjct: 128 DECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLERERERER 187

Query: 183 --NRYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSD 242
             +RY+D R +  GGR+  RDRFDS    +KY  RD Y  ERY P GDRF S RY     
Sbjct: 188 EFDRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEH 247

Query: 243 RFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARNEGRSYRNRPAPYDRPSR-GGRPSSFD 288
                  G++R Y RD   R   D+YG  GP R+EGR YR+RP PYDRPSR GGRPSS++
Sbjct: 248 HLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYE 292

[Close]

BLAST of Bhi07G000703 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-30
Identity = 111/293 (37.88%), Postives = 154/293 (52.56%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGG 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY    R    GG GGG
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDR-DRSRPSGGRGGG 120

Query: 121 DRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRY-- 180
           D       CFKCG+ GH+AR+CPS     G G            S + DR++  ++RY  
Sbjct: 121 D-------CFKCGKPGHFARECPSESSRDGGG----------RFSSKDDRYSSKDDRYGA 180

Query: 181 VDDRYEG-GGRFGDR-DRFDS-----SSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDS 240
            DDRY     R+G + DR+ S     SS+D++YGSRD         GG R+G  R     
Sbjct: 181 KDDRYGAKEDRYGAKDDRYSSKDDRYSSKDDRYGSRD--------GGGSRYGPDRSGE-- 240

Query: 241 DRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGG 280
                    +  G  RDGG RG      GG         R+  APYDRP  GG
Sbjct: 241 ---------RAGGRSRDGGSRG----APGGE--------RHSRAPYDRPRAGG 243

[Close]

BLAST of Bhi07G000703 vs. ExPASy Swiss-Prot
Match: Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.8e-24
Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   + +LE  F++FG++IDS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGG-GDRSARQDEC 125
            EM+G+E   R I+VN+A+ + G     G  GGGY   G G YGGGGGG GDR  R    
Sbjct: 65  DEMNGKELDGRTITVNEAQSR-GGGGGGGRGGGGYGGRGGGGYGGGGGGYGDR--RGGGG 124

Query: 126 FKCGRLGHWARDCPSVGGGRGRGG 149
           +  G  G       S GGG G GG
Sbjct: 125 YGSGGGGRGGGGYGSGGGGYGGGG 145

[Close]

BLAST of Bhi07G000703 vs. ExPASy Swiss-Prot
Match: P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 68/145 (46.90%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +R LE AF+++G+++DS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 7   EYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYR--GGGYSTGGRGSYGGGGGGGDRSARQDE 125
             M+GQ+   R I+VN+A+ + G     G R  GGGY +GG G YGGGGGG     R+  
Sbjct: 67  EGMNGQDLDGRSITVNEAQSR-GSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREGG 126

Query: 126 CFKCGRLGHWARDCPSVGGGRGRGG 149
            +  G  G+ +R     GGG G GG
Sbjct: 127 -YSGGGGGYSSRG----GGGGGYGG 145

[Close]

BLAST of Bhi07G000703 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.3e-156
Identity = 278/287 (96.86%), Postives = 281/287 (97.91%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY--GGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180
           QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLAR+RLGD DRGDRFAGD NRYVDDRYEG
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFDSSSRDNKYGSRDRYVS+RYPPGGDRFGS RYNNDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 288
           YRD GPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 YRD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]

BLAST of Bhi07G000703 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.3e-156
Identity = 278/287 (96.86%), Postives = 281/287 (97.91%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY--GGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180
           QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLAR+RLGD DRGDRFAGD NRYVDDRYEG
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFDSSSRDNKYGSRDRYVS+RYPPGGDRFGS RYNNDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 288
           YRD GPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 YRD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]

BLAST of Bhi07G000703 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.7e-144
Identity = 259/287 (90.24%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR                GGGDRSAR
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----------------GGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180
           QDECFKCGR GHWARDCPSVGGGRGRGGDSFL R+RLGDSDRGDRFAGDNNRYVDDRYEG
Sbjct: 121 QDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFD +SRD+KYG+RDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 288
           YRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]

BLAST of Bhi07G000703 vs. ExPASy TrEMBL
Match: A0A6J1KMD7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496986 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.8e-144
Identity = 258/287 (89.90%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR                GGGDRSAR
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----------------GGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180
           QDECFKCGR GHWARDCPSVGGGRGRGGDSFL R+RLGDSDRGDRFAGDNNRYVDDRYEG
Sbjct: 121 QDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFD +SRD+KYG+RDRYVSERYPPGGDRFGSSRYNNDSDRFP+NGYGKDRGY
Sbjct: 181 GGRFGDRDRFD-NSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 288
           YRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]

BLAST of Bhi07G000703 vs. ExPASy TrEMBL
Match: A0A6J1FZZ1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449458 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 262/288 (90.97%), Postives = 270/288 (93.75%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGR+EYRIFVGGLSW+ITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYS+GGR S  GGGGGGDRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180
           QDECFKCGR GHWARDCP VGGGRGRGGDSFL+R RLGDSD GDRFAGDNNRYVDDRYEG
Sbjct: 121 QDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240
           GGR GDRDRFDSS   +KYGSRDRYVS+RYPP GDRFGSSRYNNDS RFPVN +GKDRGY
Sbjct: 181 GGRLGDRDRFDSSR--DKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSR-GGRPSSFDRY 288
           YRDGGPRGVDKY S GPARNEGRSYRNRPAPYDRPSR  GRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY 285

The following BLAST results are available for this feature:

BLAST of Bhi07G000703 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04280.1	8.2e-80	57.01	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.1	8.3e-72	53.31	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.2	8.3e-72	53.31	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT3G26420.1	8.4e-32	37.88	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT4G39260.2	1.7e-24	50.00	cold, circadian rhythm, and RNA binding 1	[more]

BLAST of Bhi07G000703 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWN5	1.2e-78	57.01	Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE...	[more]
O22703	1.2e-70	53.31	Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE...	[more]
Q9LIN3	1.2e-30	37.88	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE...	[more]
Q05966	4.8e-24	48.61	Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1	[more]
P49310	1.8e-23	46.90	Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]

BLAST of Bhi07G000703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGN5	9.3e-156	96.86	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3CG30	9.3e-156	96.86	Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A6J1GY86	3.7e-144	90.24	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KMD7	4.8e-144	89.90	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1FZZ1	1.5e-142	90.97	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 123..139 e-value: 1.3E-5 score: 34.6
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 123..139 e-value: 2.3E-8 score: 33.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 124..139 score: 11.086722
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 2.3E-28 score: 110.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..78 e-value: 4.9E-20 score: 71.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 19.484827
None	No IPR available	GENE3D	4.10.60.10		coord: 119..147 e-value: 1.4E-8 score: 36.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..287
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 1..248
None	No IPR available	PANTHER	PTHR15241:SF294	GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE	coord: 1..248
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..118 e-value: 2.9E-31 score: 110.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..115
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 108..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000703	Bhi07M000703	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding