Bhi07G000681 (gene) Wax gourd (B227) v1

Overview
NameBhi07G000681
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Locationchr7: 27972578 .. 27973449 (-)
RNA-Seq ExpressionBhi07G000681
SyntenyBhi07G000681
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAGAGTAGGAAGGGCACTACCTCCAATATGATGACCACCATACAGCCACCAACTCCACTAAAAATCATACTTCAAAGTGACAAAAGAAGCTACTAGAATTATATTGTAACACACATAACCTTTGCATGCTTATAAATAAGGGGCTCCTAAAGCCCACCAATTCCACGCATCAAAAACCAACCCTTTTCTTTCAATGCATTACAACAAGTTTACGTAAAGCATCCCAATTACCACTTCCCTTTCTTCATATTCTCAAATAAAAACAAAAACAAAAACAACCTGTGGCTACGTCCAAGCTTTGATTTTCTCTCCACATTGTTATTTATAATCATCAATGGCCACCACCAGGGCGGTTGGTTTGGTGCTCTTTGTTTTGTTAATGGTGGACTTCACTCTTGCTGCTAGGTTCTTCAGAGGCTATGGAGGTGGTGGAGGAGGTGGTAGTGGTGGCGGTGGAGGTGGCGGAGAAGGTTCGGGGCCTTGGTCGGGTTCGGGATATGGTTCGGGGTATGGCTCGGGTTATGGTTCGGGATATGGCGATGATGGCTACTCTAGATATGGAGATGAAGGCTATGGACCATATGGTGGTGGTGGAGGTGGAGGTGGAGGAGGAGGTGGAGGCGGCGGCGGTGGTGGTGGCGCAAATGGAGCCGGGTATGGGCGTGGGTTTGGATCGGGAAGTGGGTCAGGGTACGGGCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGGTGGAGGGTCTGGGTACGGTTCTGGATATGGGTCGGGATATGGAGGAGGTGGGGATGAAGAATCACCATGAATATAATTCGATGATACCTACAAATGAATTTATCTTTGAAAGCAATTGAAATAAAGTGTAA

mRNA sequence

GAAAGAGAGTAGGAAGGGCACTACCTCCAATATGATGACCACCATACAGCCACCAACTCCACTAAAAATCATACTTCAAAGTGACAAAAGAAGCTACTAGAATTATATTGTAACACACATAACCTTTGCATGCTTATAAATAAGGGGCTCCTAAAGCCCACCAATTCCACGCATCAAAAACCAACCCTTTTCTTTCAATGCATTACAACAAGTTTACGTAAAGCATCCCAATTACCACTTCCCTTTCTTCATATTCTCAAATAAAAACAAAAACAAAAACAACCTGTGGCTACGTCCAAGCTTTGATTTTCTCTCCACATTGTTATTTATAATCATCAATGGCCACCACCAGGGCGGTTGGTTTGGTGCTCTTTGTTTTGTTAATGGTGGACTTCACTCTTGCTGCTAGGTTCTTCAGAGGCTATGGAGGTGGTGGAGGAGGTGGTAGTGGTGGCGGTGGAGGTGGCGGAGAAGGTTCGGGGCCTTGGTCGGGTTCGGGATATGGTTCGGGGTATGGCTCGGGTTATGGTTCGGGATATGGCGATGATGGCTACTCTAGATATGGAGATGAAGGCTATGGACCATATGGTGGTGGTGGAGGTGGAGGTGGAGGAGGAGGTGGAGGCGGCGGCGGTGGTGGTGGCGCAAATGGAGCCGGGTATGGGCGTGGGTTTGGATCGGGAAGTGGGTCAGGGTACGGGCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGGTGGAGGGTCTGGGTACGGTTCTGGATATGGGTCGGGATATGGAGGAGGTGGGGATGAAGAATCACCATGAATATAATTCGATGATACCTACAAATGAATTTATCTTTGAAAGCAATTGAAATAAAGTGTAA

Coding sequence (CDS)

ATGGCCACCACCAGGGCGGTTGGTTTGGTGCTCTTTGTTTTGTTAATGGTGGACTTCACTCTTGCTGCTAGGTTCTTCAGAGGCTATGGAGGTGGTGGAGGAGGTGGTAGTGGTGGCGGTGGAGGTGGCGGAGAAGGTTCGGGGCCTTGGTCGGGTTCGGGATATGGTTCGGGGTATGGCTCGGGTTATGGTTCGGGATATGGCGATGATGGCTACTCTAGATATGGAGATGAAGGCTATGGACCATATGGTGGTGGTGGAGGTGGAGGTGGAGGAGGAGGTGGAGGCGGCGGCGGTGGTGGTGGCGCAAATGGAGCCGGGTATGGGCGTGGGTTTGGATCGGGAAGTGGGTCAGGGTACGGGCTGTCTCTTATACACATCTAG

Protein sequence

MATTRAVGLVLFVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGDDGYSRYGDEGYGPYGGGGGGGGGGGGGGGGGGGANGAGYGRGFGSGSGSGYGLSLIHI
Homology
BLAST of Bhi07G000681 vs. ExPASy TrEMBL
Match: A0A6J1H1H1 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita moschata OX=3662 GN=LOC111458712 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 109/123 (88.62%), Postives = 110/123 (89.43%), Query Frame = 0

Query: 1   MATTRAVGLVLFVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYG 60
           MATT  +GLVL VLLM D TLAARF RGYGGGGGGGSGGGGGGGEGS PWSGSGYGSGYG
Sbjct: 1   MATTGTIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYG 60

Query: 61  SGYGSGYGDDGYSRYGDEGYGPYG--GGGGGGGGGGGGGGGGGGANGAGYGRGFGSGSGS 120
           SGYGSGYGD GY RYGDEGYGPYG  G GGGGGGGGGGGGGGGGANGAGYG GFGSGSGS
Sbjct: 61  SGYGSGYGDGGYPRYGDEGYGPYGPYGSGGGGGGGGGGGGGGGGANGAGYGHGFGSGSGS 120

Query: 121 GYG 122
           GYG
Sbjct: 121 GYG 123

BLAST of Bhi07G000681 vs. ExPASy TrEMBL
Match: A0A6J1JQB8 (putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111487374 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 9.2e-31
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0

Query: 1   MATTRAVGLVLFVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYG 60
           MAT  A+GLVL VLLM D TLAARF RGYGGGGGGGSGGGGGGGEGS PWSGSGYGSGYG
Sbjct: 1   MATNGAIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYG 60

Query: 61  SGYGSGYGDDGYSRYGDEGYGPYGGGGGGGGGGGGGGGGGGGANGAGYGRGFGSGSGSGY 120
           SGYGSGYGD GY RYGDEGYGPY G GGGGGGGGGGGGGGG ANGAGYG+GFGSGSGSGY
Sbjct: 61  SGYGSGYGDGGYPRYGDEGYGPY-GSGGGGGGGGGGGGGGGSANGAGYGQGFGSGSGSGY 120

Query: 121 G 122
           G
Sbjct: 121 G 120

BLAST of Bhi07G000681 vs. ExPASy TrEMBL
Match: A0A1S3BGF1 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489565 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.2e-26
Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0

Query: 1   MATTRAVGLVLFVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGS-GPWSGSGYGSGY 60
           MATT+AVG V+ VLLM+D  LAARFFRGYGGGGGGGSGGGGGGGEGS GPW GSGYGSGY
Sbjct: 1   MATTKAVGFVVLVLLMLDLALAARFFRGYGGGGGGGSGGGGGGGEGSGGPWPGSGYGSGY 60

Query: 61  GSGYGSGY-GDDGYSRYGDEGYGPYGG-GGGGGGGGGGGGGGGGGANGAGYGRGFGSGSG 120
           GSGYGSGY G++GYSRYGDEGYGPYG   GGGGGGGGGGGGGGG A GA YGRGFG G G
Sbjct: 61  GSGYGSGYGGEEGYSRYGDEGYGPYGRYSGGGGGGGGGGGGGGGSAIGAEYGRGFGMGGG 120

Query: 121 SGYG 122
           SGYG
Sbjct: 121 SGYG 124

BLAST of Bhi07G000681 vs. ExPASy TrEMBL
Match: A0A0A0KUV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 102/124 (82.26%), Postives = 108/124 (87.10%), Query Frame = 0

Query: 1   MATTRAVGLVLFVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYG 60
           MATT+A GLV+ VLLM+D  LAARFFRGY    GGGSGGGGGGGEGSGPWSGSGYGSGYG
Sbjct: 1   MATTKAAGLVILVLLMLDLALAARFFRGY----GGGSGGGGGGGEGSGPWSGSGYGSGYG 60

Query: 61  SGYGSGY-GDDGYSRYGDEG-YGPYGG-GGGGGGGGGGGGGGGGGANGAGYGRGFGSGSG 120
           SGYGSGY G++GYSRYGDEG YGPYG   GGGGGGGGGGGGGGG A GA YGRGFG+GSG
Sbjct: 61  SGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSG 120

Query: 121 SGYG 122
           SGYG
Sbjct: 121 SGYG 120

BLAST of Bhi07G000681 vs. ExPASy TrEMBL
Match: A0A6J1CF67 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111010186 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-17
Identity = 92/122 (75.41%), Postives = 100/122 (81.97%), Query Frame = 0

Query: 2   ATTRAVGLVLFVLLMVDFTLAARFFRGYGGGGGGGSGGGGGGGEGSGPWSGSGYGSGYGS 61
           ++TRA+GLV+ VLLMVD TLAAR  RGY    GGG+GGGGGGGEG GP SGSGYGSGYGS
Sbjct: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGY----GGGTGGGGGGGEGFGP-SGSGYGSGYGS 63

Query: 62  GYGSGYGDDGYSRYGDEGYGPYGG-GGGGGGGGGGGGGGGGGANGAGYGRGFGSGSGSGY 121
           GYGSG+GD+ Y  Y  E YGPYG  G GGGGGGGGGGGGGGGA GAGYGRGFGSG GSG 
Sbjct: 64  GYGSGFGDEAYEPY--EPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGG 118

Query: 122 GL 123
           G+
Sbjct: 124 GI 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H1H11.9e-3188.62glycine-rich cell wall structural protein 1.0-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1JQB89.2e-3188.43putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661... [more]
A0A1S3BGF15.2e-2683.87glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A0A0KUV73.8e-2482.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1[more]
A0A6J1CF672.0e-1775.41putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37612FIBROIN HEAVY CHAIN FIB-H LIKE PROTEINcoord: 1..121
NoneNo IPR availablePANTHERPTHR37612:SF6FIBROIN HEAVY CHAIN FIB-H LIKE PROTEINcoord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000681Bhi07M000681mRNA