Bhi07G000138 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000138
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	CACTA en-spm transposon protein
Location	chr7: 8059745 .. 8061237 (-)
RNA-Seq Expression	Bhi07G000138
Synteny	Bhi07G000138

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGGGCAACGTCAAGATCGTCTAGCATATGAACTAATTAGGTAAGCTAACACTTTGACTACGAGTCCCTCGATAAAGGTAGGAACGACCATCGCACCAGGTGATAGTAGTATGTCTTAGGTTGAATATCTAAATATTATTGTAACCTCTAATTGAAGTAGTGTATTTGATCTTGTTACCGGATCCAATTCTAGAACAAAATGGAAGCGTGGGCGAGGGCACAGTCGAAACATTAATTTGGATGTATATGTACATCGACATGGGCGGATCCCAATTACCATTTCTGAGGATGTTGGAAAACCAGTAAGCATCTTTGCTACAAAGTTTAGCAACGCCATTGGGACCGCAACCCGGGACACAATTTCATTGCATTGTTCTAAGTGGAAGGATGTGCCTAGTGATGTCATTGCCACTATAAAGGTTAATTTACAAGTAAATTTTATGCTTTTATTCTATTAATCTCATATGTATACTTATCATAATTTTTATTGAAAATGTAGACACGTTTTATTATGGATCTATTCTCGAATGTCATCAATAAGTACATAAATCGACAAATAAAAAACTCATTTGGAGAATATAGATCAAAATTGCATAAGCACTATTATAGCTTTGAGAATCCTGTAATTGCTCGTGAAAGTCCACCAGACAAGTTAACAAATAAAGAAGATTGGAAGATTCTTTGTGATCGATGAGAGACTCCTGAATGGTAGGTAAATTTTATATGTTTGTTGTACTTATTGTTTACATAAATTGCTTGTACTAATAAATCATAATTTGTGTATGAAAAAAGGGAGAAGAACAAGAATAACAGAGAATATCTCCGTTTTAACTATTATTGAGTTTTAACTATTATTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTTGTATGGTATGATGTAAATTCATTATTGTTTTATTCATTTACCATTGAATGTAAAGAATATATTTTTTTTATTGAATTATAGACAATCGAGAATGGTGAAAAAGTAGGCCAAGTAGAATTGTTTTGCAAAAGTCACTTCTCAGAGAAGGATGAGTGGATAAGCGAAGCCAGTAAAGAAACATATGTGTAAGTTATATTGTATTATATATGCGTAATTTTATATTAATCCTTATATATAATATATAACCTAAAAAACTATTATAAATATAGTTGACAATGCAAGAGGAGATTAGAAAGTCATCGATGGGGTTGAACCAACAACGGAGAAAATTATTTGTAAACAGGTTTTGAGAAAACGATCAGGCCACATTAAAGGTCTTGGATGGAACCCAAAACTCAATTTAGCTACATATTCCTCACAAATTGAGAAAGTTATTGGGAATAAGTATGAAAAGCTTGAGGCTGAGGTGACAAGCTTAAAGGAGGAACATGCCATGTTGAAGTCAATAGTTTCGGGTCTTCAAGATCAATTGATTGAAATCACAAGACAGTTAGGTGCGCAACAAAAGCAAGGAGATGGACCTTCGAACAACTAG

mRNA sequence

ATGGTAGGGCAACGTCAAGATCGTCTAGCATATGAACTAATTAGTAGTGTATTTGATCTTGTTACCGGATCCAATTCTAGAACAAAATGGAAGCGTGGGCGAGGGCACAGTCGAAACATTAATTTGGATGTATATGTACATCGACATGGGCGGATCCCAATTACCATTTCTGAGGATGTTGGAAAACCAGTAAGCATCTTTGCTACAAAGTTTAGCAACGCCATTGGGACCGCAACCCGGGACACAATTTCATTGCATTGTTCTAAGTGGAAGGATGTGCCTAGTGATGTCATTGCCACTATAAAGGTTTTGAGAAAACGATCAGGCCACATTAAAGGTCTTGGATGGAACCCAAAACTCAATTTAGCTACATATTCCTCACAAATTGAGAAAGTTATTGGGAATAAGTATGAAAAGCTTGAGGCTGAGGTGACAAGCTTAAAGGAGGAACATGCCATGTTGAAGTCAATAGTTTCGGGTCTTCAAGATCAATTGATTGAAATCACAAGACAGTTAGGTGCGCAACAAAAGCAAGGAGATGGACCTTCGAACAACTAG

Coding sequence (CDS)

ATGGTAGGGCAACGTCAAGATCGTCTAGCATATGAACTAATTAGTAGTGTATTTGATCTTGTTACCGGATCCAATTCTAGAACAAAATGGAAGCGTGGGCGAGGGCACAGTCGAAACATTAATTTGGATGTATATGTACATCGACATGGGCGGATCCCAATTACCATTTCTGAGGATGTTGGAAAACCAGTAAGCATCTTTGCTACAAAGTTTAGCAACGCCATTGGGACCGCAACCCGGGACACAATTTCATTGCATTGTTCTAAGTGGAAGGATGTGCCTAGTGATGTCATTGCCACTATAAAGGTTTTGAGAAAACGATCAGGCCACATTAAAGGTCTTGGATGGAACCCAAAACTCAATTTAGCTACATATTCCTCACAAATTGAGAAAGTTATTGGGAATAAGTATGAAAAGCTTGAGGCTGAGGTGACAAGCTTAAAGGAGGAACATGCCATGTTGAAGTCAATAGTTTCGGGTCTTCAAGATCAATTGATTGAAATCACAAGACAGTTAGGTGCGCAACAAAAGCAAGGAGATGGACCTTCGAACAACTAG

Protein sequence

MVGQRQDRLAYELISSVFDLVTGSNSRTKWKRGRGHSRNINLDVYVHRHGRIPITISEDVGKPVSIFATKFSNAIGTATRDTISLHCSKWKDVPSDVIATIKVLRKRSGHIKGLGWNPKLNLATYSSQIEKVIGNKYEKLEAEVTSLKEEHAMLKSIVSGLQDQLIEITRQLGAQQKQGDGPSNN

Homology

[Close]

BLAST of Bhi07G000138 vs. ExPASy TrEMBL
Match: A0A5D3BM75 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00400 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.4e-26
Identity = 69/108 (63.89%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   MVGQRQDRLAYELISSVFDLVT------GSNSRTKWKRGRGHSRNINLDVYVHRHGRIPI 60
           M+GQRQD LA EL+     L         S+S+TK K    HSRNIN+D+YV RH +I I
Sbjct: 1   MMGQRQDCLADELVRKANTLTMDPSTKGDSSSKTKKKCWHWHSRNINVDMYVQRHEKILI 60

Query: 61  TISEDVGKPVSIFATKFSNAIGTATRDTISLHCSKWKDVPSDVIATIK 103
           TI E VGK V +FATKFSNAIGTATRDTIS+HCSKWKDV SDVI TIK
Sbjct: 61  TIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIK 108

[Close]

BLAST of Bhi07G000138 vs. ExPASy TrEMBL
Match: A0A5A7SMM8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00980 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.0e-25
Identity = 68/107 (63.55%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 2   VGQRQDRLAYELISSVFDLVT------GSNSRTKWKRGRGHSRNINLDVYVHRHGRIPIT 61
           +GQRQD LA EL+     L         S+S+TK K    HSRNIN+D+YV RH +I IT
Sbjct: 1   MGQRQDCLADELVRKANTLTMDPSTKGDSSSKTKKKCWHWHSRNINVDMYVQRHEKILIT 60

Query: 62  ISEDVGKPVSIFATKFSNAIGTATRDTISLHCSKWKDVPSDVIATIK 103
           I E VGK V +FATKFSNAIGTATRDTIS+HCSKWKDV SDVI TIK
Sbjct: 61  IHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIK 107

[Close]

BLAST of Bhi07G000138 vs. ExPASy TrEMBL
Match: A0A5A7T4S0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002410 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.2e-24
Identity = 65/106 (61.32%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 3   GQRQDRLAYELISSV------FDLVTGSNSRTKWKRGRGHSRNINLDVYVHRHGRIPITI 62
           G+ +DRLA EL+         F +   S S TK K G  HSRNI+LD+YV RHGRIPIT 
Sbjct: 64  GRMEDRLADELVREANLLAMGFTIEGDSCSGTKRKCGHEHSRNISLDMYVQRHGRIPITN 123

Query: 63  SEDVGKPVSIFATKFSNAIGTATRDTISLHCSKWKDVPSDVIATIK 103
            E VGKP+S+FATKF NAIGTAT+DTI + CSKWKD  SDVI+TIK
Sbjct: 124 DEMVGKPISVFATKFCNAIGTATQDTILVCCSKWKDGFSDVISTIK 169

[Close]

BLAST of Bhi07G000138 vs. ExPASy TrEMBL
Match: A0A5D3CX15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00170 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.7e-12
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 24  SNSRTKWKRGRGHSRNINLDVYVHRHGRIPITISEDVGKPVSIFATKFSNAIGTA 79
           S+S TK KR RGHSRNI+LD+YV RH +I ITI E VGKPVSIFATKFSN IG A
Sbjct: 176 SSSGTKKKRERGHSRNISLDMYVQRHEKIQITIDEKVGKPVSIFATKFSNTIGAA 230

[Close]

BLAST of Bhi07G000138 vs. ExPASy TrEMBL
Match: A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 24  SNSRTKWK-RG-RGHSRNINLDVYVHRHGRIPITISEDVGKPVSIFATKFSNAIGTATRD 83
           S SRTK + RG RG+ RNI LD +V +HG++ I I+E+ GKPV+ FA K +  IGTA R+
Sbjct: 176 SQSRTKKRERGVRGYGRNIELDKFVKKHGKVKIEINEEEGKPVTTFAPKIALGIGTAVRN 235

Query: 84  TISLHCSKWKDVPSDV 98
           TI L C  WK +P DV
Sbjct: 236 TILLSCENWKAIPMDV 251

The following BLAST results are available for this feature:

BLAST of Bhi07G000138 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G000138 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi07G000138 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BM75	3.4e-26	63.89	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SMM8	1.0e-25	63.55	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7T4S0	3.2e-24	61.32	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CX15	3.7e-12	74.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SPZ3	1.1e-11	53.95	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000138	Bhi07M000138	mRNA