Bhi06G001728 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001728
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
Locationchr6: 55768645 .. 55769920 (+)
RNA-Seq ExpressionBhi06G001728
SyntenyBhi06G001728
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATAATTTGATGGGGCCTTATTCTTCATTTTTGGAACTGTTCTAGCAGATTCACCGACTCCTGAGAATGACCTGCTTCAATTATTTTCTGAGAGTATCTGATCCTCCATAATTTGTAGATAGGAAAAGAATAACATTTTGATGTGGATAAGTTTTGTCACAGTTCCACAATTCGAAAGCAGCAAATAACGTTAGGATCTTCAATGACTTTTATATGCGCTTTTTAGAACTTGTGCTTAATTGAAATTATATATTTATCTCTCTTTTCTGATCTGTATTCAAATTGTGGAAGATATTGATATTATATCCTAGAATGACCATATCATCATAATTATTGATACTAAACAAATATGAATTTAGCCAGATTCCTGTTTTTGACATAAGAGATAGAGTGGGCTTTTTTGTATGGTTGCTTTCACTAAGGACAAATCAAGAAGAATCAAAATATCACCTCTTGAATTGCACTATAACTACTTCTAGCCTCACGCACTAGTTGAGGATAAATCGCTTAATTCTGATCATATTTAATTGTAATTAACAACTCTCTTGCTCTTTTAAATCCTTGAGTTTCCTTACTTCTTGCAGTCTGCAGGTATGGCCTCCGATGGCAGCCTTAGCGTTTCAGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACGGTGAGGTCGAGTTCTCCCAAAGGCCAGTGTTTGTGCTCGCCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCAACATCGTCATCATGGATGAAACGATCGAAATCGATGCCTGCCAACAACCCTGGGGCTTCTCTGTCTCCCAAAGAATCTCATGAATCTTCCCAAGGCCATGGAGCATGTGCATGAAGCTGCATACATGTAACACACCTTATAACTTATATCCTTTTAATTCTCTAAAGTTGTGGAGAAGAAAAGCTTTAATTTTATATCTCAACTTTGTATGTAATAGAATATATATATATATATATTTTAATATGTTCACCTTCGCGTGTTCGCGCCCGCATCGTTTATCTGTGTATATTTATGTGCATAGTAATTTTGTCCGTATCATTCTTTCTTGAAATATAATAAACTGATCCTCTTCTACCTTTTGTACTTACTATCAAGATGTAGTTTGTTCGGCTTGGGCTTCATTAATCTGAAAATAGTTTGTTTCTACAAAATTCTTGCTTGAGGAAGGCATGAATTTTCAGCCAAACATTGATTGCATGATGAACAGTTCAATTTTTCTTCTCTCTCCCAATTTTAAATATTTCAC

mRNA sequence

GTATAATTTGATGGGGCCTTATTCTTCATTTTTGGAACTGTTCTAGCAGATTCACCGACTCCTGAGAATGACCTGCTTCAATTATTTTCTGAGAGTATCTGATCCTCCATAATTTGTAGATAGGAAAAGAATAACATTTTGATGTGGATAAGTTTTGTCACAGTTCCACAATTCGAAAGCAGCAAATAACTCTGCAGGTATGGCCTCCGATGGCAGCCTTAGCGTTTCAGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACGGTGAGGTCGAGTTCTCCCAAAGGCCAGTGTTTGTGCTCGCCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCAACATCGTCATCATGGATGAAACGATCGAAATCGATGCCTGCCAACAACCCTGGGGCTTCTCTGTCTCCCAAAGAATCTCATGAATCTTCCCAAGGCCATGGAGCATGTGCATGAAGCTGCATACATGTAACACACCTTATAACTTATATCCTTTTAATTCTCTAAAGTTGTGGAGAAGAAAAGCTTTAATTTTATATCTCAACTTTGTATGTAATAGAATATATATATATATATATTTTAATATGTTCACCTTCGCGTGTTCGCGCCCGCATCGTTTATCTGTGTATATTTATGTGCATAGTAATTTTGTCCGTATCATTCTTTCTTGAAATATAATAAACTGATCCTCTTCTACCTTTTGTACTTACTATCAAGATGTAGTTTGTTCGGCTTGGGCTTCATTAATCTGAAAATAGTTTGTTTCTACAAAATTCTTGCTTGAGGAAGGCATGAATTTTCAGCCAAACATTGATTGCATGATGAACAGTTCAATTTTTCTTCTCTCTCCCAATTTTAAATATTTCAC

Coding sequence (CDS)

ATGGCCTCCGATGGCAGCCTTAGCGTTTCAGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACGGTGAGGTCGAGTTCTCCCAAAGGCCAGTGTTTGTGCTCGCCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCAACATCGTCATCATGGATGAAACGATCGAAATCGATGCCTGCCAACAACCCTGGGGCTTCTCTGTCTCCCAAAGAATCTCATGAATCTTCCCAAGGCCATGGAGCATGTGCATGA

Protein sequence

MASDGSLSVSVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKRSKSMPANNPGASLSPKESHESSQGHGACA
Homology
BLAST of Bhi06G001728 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 47.8 bits (112), Expect = 5.4e-06
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0

Query: 26  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKRSKSMPAN----NPGASLSPK 77
           +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N      G S SPK
Sbjct: 57  KSSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSNLSMLAGGDSNSPK 111

BLAST of Bhi06G001728 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0

Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKRSKSMPA 67
          ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36 QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

BLAST of Bhi06G001728 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0

Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKRSKSMPA 67
          ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36 QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

BLAST of Bhi06G001728 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04
Identity = 17/26 (65.38%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 31 KGQCLCSPTMHQGSFRCRLHRSTSSS 57
          K  C+C+PT H+GSFRCRLHRS+++S
Sbjct: 62 KTVCICAPTKHEGSFRCRLHRSSATS 87

BLAST of Bhi06G001728 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0

Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKRSKSMPAN 68
          ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Sbjct: 24 QTSITKTICICSPTTHPGSFKCKLHRTPS---LQRNKSVETN 62

BLAST of Bhi06G001728 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.0e-33
Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0

Query: 1  MASDGSLSVSVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKR 60
          MASDGSL VSVSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSS+WMKR
Sbjct: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPGASLSPKESHESSQGHGAC 89
          SKSMPANNP ASLSPK S  SS+G GAC
Sbjct: 61 SKSMPANNPVASLSPKGSLGSSRGLGAC 88

BLAST of Bhi06G001728 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0

Query: 1  MASDGSLSVSVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKR 60
          MASDGSLSVSVSTSPKH NRDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRSTSS+WMKR
Sbjct: 1  MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPGASLSPKESHESS 83
          SKSMP NNP ASLSPKES ESS
Sbjct: 61 SKSMPTNNPVASLSPKESLESS 82

BLAST of Bhi06G001728 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0

Query: 1  MASDGSLSVSVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKR 60
          MASDGSL VSVS+SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSS+WMKR
Sbjct: 1  MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPGASLSPKESHESS 83
          SKSMPANNP ASLSPK S  SS
Sbjct: 61 SKSMPANNPVASLSPKGSLGSS 82

BLAST of Bhi06G001728 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-29
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0

Query: 1   MASDGSLSVSVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKR 60
           MASDGSLSV VSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SS+WMKR
Sbjct: 43  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 102

Query: 61  SKSMPANNPGASLSPKESHESS 83
           SKSMPA++P ASLS KES  SS
Sbjct: 103 SKSMPADHPVASLSSKESLGSS 124

BLAST of Bhi06G001728 vs. ExPASy TrEMBL
Match: A0A6A1UK22 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 0

Query: 1  MASDGSLSVSVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSSWMKR 60
          MAS GS  +SVST+PK G  +A T  S SPKGQCLCSPT H+GSFRCRLHRS SS+WMKR
Sbjct: 1  MASRGS-QLSVSTTPKSGKGEAVTGASDSPKGQCLCSPTTHKGSFRCRLHRS-SSAWMKR 60

Query: 61 SKSMPANNPGASLSPKESHES 82
          SKSMPA++  A+LSPK    S
Sbjct: 61 SKSMPASSSVAALSPKSVESS 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G13227.15.4e-0649.09serine-rich protein-related [more]
AT1G67910.11.6e-0556.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G67910.21.6e-0556.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G56500.11.0e-0465.38serine-rich protein-related [more]
AT1G24577.13.9e-0447.62unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V1X54.0e-3388.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LKU32.6e-3292.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1[more]
A0A5D3CHP33.2e-3089.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1G4981.6e-2989.02uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506... [more]
A0A6A1UK221.5e-1667.90Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 1..78
NoneNo IPR availablePANTHERPTHR33132:SF37SERINE-RICH PROTEIN-LIKE PROTEINcoord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001728Bhi06M001728mRNA