Bhi06G001359 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G001359
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein NIM1-INTERACTING 3-like
Location	chr6: 45507662 .. 45508872 (-)
RNA-Seq Expression	Bhi06G001359
Synteny	Bhi06G001359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACAAAATTACTCTTTTTTTTTCTCTCTCTCTCTCTTTCTTCATTATCCAAATTTATAAAATAGCCCAAGATGATGAGGCTACATATTCAAAGCATAAAATAATATAAAAGGCCAATTACTTTTTGATCCTTACAGTAACTTTCCCACATGTCTCTGGAAAACCCTGTCTACAACATTTCTCTCTGAATCAGCTATCTCTTTATTCTCTCTCTCTCTCTCTCTAATCCATTTCTCCACAGCCATGGAAGGAGGAAGAAAAAAAAGAAAATTGCAGAATAATGAGAAAGAAGAAGAAGAATATGATGAAGAAGATGAAGATGAAGAGGAAAATATGAAGTTGTTCTATGCTCTGATTCAAAACACAAAGGCTATGAGAGACAGAATGAAATCAAAAGAATCAACAGAAGGAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATGGATATTACAACAATAAATCCAACATCACTCTTCAATTACCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGCAAAAAAAGAACAAGAAGAGGAACAAGAAGATGTAGACAAGGTAGGAAAAGGGGAAACAGGGCTTGACCTTAATCTTTCTCTTTGAGTTTTGTGTGTGTGTGTGTGTGTGTTTATTAACACTTCTTTATAATGGGTTGCTTTTGGTTTTTCTTCATTCTAATTTCTTTGCTCACCTCTTGGCCATTTTTGTTTATGCTTTTAAGCTTGTTCTGTTTCTTGTGTTCTGTTTCCATTGAGCATTTGAACTACCTTTTCTTTGATATTTTGAGTGGCAAATTTAAGAAAAGTGAGAAATCACATCATTAATTTTAAGGGGAAAGGGGAAAGTTGATTAAGATAGGAAAATACTTAGGTGTAGTCTCACCCTCTATAATTGTGAAGTTCGTACTGCATTAATCTGGACTTACAGTACGTACTACGTCTAATTAAAAATTATCACATATCATTTAAAAAAATTGGTGTGGAAAGAAATGGAGCGTGAAATTAGATGCAATTCTAATCTTTATTCTCGAAAATAATCAATCATGATGAGAATGAATTATTATTTTAGTTTTTAATCCAATTTCATTGTTGTTATCACATTCACTTACATGTAAATAATAATGAGTAGGGTTAATGCATATGTTAATTGAGCTATGCTTGTTTTGATTTATTATTTTATACTTT

mRNA sequence

TAACAAAATTACTCTTTTTTTTTCTCTCTCTCTCTCTTTCTTCATTATCCAAATTTATAAAATAGCCCAAGATGATGAGGCTACATATTCAAAGCATAAAATAATATAAAAGGCCAATTACTTTTTGATCCTTACAGTAACTTTCCCACATGTCTCTGGAAAACCCTGTCTACAACATTTCTCTCTGAATCAGCTATCTCTTTATTCTCTCTCTCTCTCTCTCTAATCCATTTCTCCACAGCCATGGAAGGAGGAAGAAAAAAAAGAAAATTGCAGAATAATGAGAAAGAAGAAGAAGAATATGATGAAGAAGATGAAGATGAAGAGGAAAATATGAAGTTGTTCTATGCTCTGATTCAAAACACAAAGGCTATGAGAGACAGAATGAAATCAAAAGAATCAACAGAAGGAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATGGATATTACAACAATAAATCCAACATCACTCTTCAATTACCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGCAAAAAAAGAACAAGAAGAGGAACAAGAAGATGTAGACAAGGTAGGAAAAGGGGAAACAGGGCTTGACCTTAATCTTTCTCTTTGAGTTTTGTGTGTGTGTGTGTGTGTGTTTATTAACACTTCTTTATAATGGGTTGCTTTTGGTTTTTCTTCATTCTAATTTCTTTGCTCACCTCTTGGCCATTTTTGTTTATGCTTTTAAGCTTGTTCTGTTTCTTGTGTTCTGTTTCCATTGAGCATTTGAACTACCTTTTCTTTGATATTTTGAGTGGCAAATTTAAGAAAAGTGAGAAATCACATCATTAATTTTAAGGGGAAAGGGGAAAGTTGATTAAGATAGGAAAATACTTAGGTGTAGTCTCACCCTCTATAATTGTGAAGTTCGTACTGCATTAATCTGGACTTACAGTACGTACTACGTCTAATTAAAAATTATCACATATCATTTAAAAAAATTGGTGTGGAAAGAAATGGAGCGTGAAATTAGATGCAATTCTAATCTTTATTCTCGAAAATAATCAATCATGATGAGAATGAATTATTATTTTAGTTTTTAATCCAATTTCATTGTTGTTATCACATTCACTTACATGTAAATAATAATGAGTAGGGTTAATGCATATGTTAATTGAGCTATGCTTGTTTTGATTTATTATTTTATACTTT

Coding sequence (CDS)

ATGGAAGGAGGAAGAAAAAAAAGAAAATTGCAGAATAATGAGAAAGAAGAAGAAGAATATGATGAAGAAGATGAAGATGAAGAGGAAAATATGAAGTTGTTCTATGCTCTGATTCAAAACACAAAGGCTATGAGAGACAGAATGAAATCAAAAGAATCAACAGAAGGAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATGGATATTACAACAATAAATCCAACATCACTCTTCAATTACCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGCAAAAAAAGAACAAGAAGAGGAACAAGAAGATGTAGACAAGGTAGGAAAAGGGGAAACAGGGCTTGACCTTAATCTTTCTCTTTGA

Protein sequence

MEGGRKKRKLQNNEKEEEEYDEEDEDEEENMKLFYALIQNTKAMRDRMKSKESTEGEKSKGVWNPKFQPEDFIEDGYYNNKSNITLQLPAASSSTTKQSNAKKEQEEEQEDVDKVGKGETGLDLNLSL

Homology

[Close]

BLAST of Bhi06G001359 vs. ExPASy TrEMBL
Match: A0A0A0LJ23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28
Identity = 91/132 (68.94%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 1   MEGGRKKRKLQNNEKEEEEYDEEDEDEEENMKLFYALIQNTKAMRDRMK-SKESTEGEKS 60
           ME GRK+RKLQ         +EE+E+E+E M+LFYALIQNTKAMRD MK SKE TE EKS
Sbjct: 1   MESGRKRRKLQ---------EEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKS 60

Query: 61  KGVWNPKFQPEDF-IEDGY-YNNKSN-ITLQLPAASSSTTKQSNAKKEQEEEQEDVDKVG 120
           KGVWNPKFQPEDF  EDGY YNNKSN I LQL AASSSTTKQ N KK+QEE++    KV 
Sbjct: 61  KGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKH--YKVV 120

Query: 121 KGETGLDLNLSL 129
           + + GLDLNLSL
Sbjct: 121 EVKKGLDLNLSL 121

[Close]

BLAST of Bhi06G001359 vs. ExPASy TrEMBL
Match: A0A6J1DQG7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia OX=3673 GN=LOC111023284 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-22
Identity = 80/129 (62.02%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 1   MEGGRKKRKLQNNEKEEEEYDEEDEDEEENMKLFYALIQNTKAMRDRMKSKEST-EGEKS 60
           ME  R+KRKLQ++EKE +   +EDE+EEE MKLF+ALIQNTK++RDR+KSK+S  + +KS
Sbjct: 1   MESVRRKRKLQDDEKEAQ---KEDEEEEEKMKLFFALIQNTKSIRDRVKSKQSAPQQDKS 60

Query: 61  KGVWNPKFQPEDFIEDGYYNNKSNITLQLPAASSSTTKQSNAKKEQEEEQEDVDKVGKGE 120
           KGVWNPKFQPEDFIED   + KSN T Q   A+SS+TKQ N   +QEEE++  DKV +G 
Sbjct: 61  KGVWNPKFQPEDFIED--CDKKSNPTPQF--AASSSTKQRN---KQEEEEQGKDKV-EGI 118

Query: 121 TGLDLNLSL 129
             LDLNLSL
Sbjct: 121 EDLDLNLSL 118

[Close]

BLAST of Bhi06G001359 vs. ExPASy TrEMBL
Match: A0A7J9MT72 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_015321 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 60/147 (40.82%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 1   MEGGRKKRKLQNNEKEEEEYDEEDEDEEENMKLFYALIQNTKAMRDRMKSKESTEGEKSK 60
           ME GRKKRK+ N    EEE D+ED+DEEE ++ F+ALI++T+ MRDR+++     G K +
Sbjct: 1   MESGRKKRKMGN----EEEKDDEDDDEEEKVEKFFALIRSTREMRDRLRNAAVPNGPKEE 60

Query: 61  -------------------GVWNPKFQPEDFIEDGYYNNKSNITLQLPAASSSTTKQSNA 120
                              G WNP FQ EDF+E G  +   N +L L  A       S++
Sbjct: 61  EYQKKKQEDKAVVGGGGGVGQWNPTFQAEDFLE-GSISRSGNNSLGLNVAG-----PSSS 120

Query: 121 KKEQEEEQEDVDKVGKGETGLDLNLSL 129
           K ++E E+   D  G+G  GLDLNLSL
Sbjct: 121 KVQREPEKRTEDDGGEGGGGLDLNLSL 137

[Close]

BLAST of Bhi06G001359 vs. ExPASy TrEMBL
Match: A0A061F4Z3 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026807 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 1   MEGGRKKRKLQNNEKEEEEYDEEDED----EEENMKLFYALIQNTKAMRDRMK-----SK 60
           ME GRKKRK+ N E+EE++ +EE+ED    EEE ++ F+ALI++T+ MRDR++     SK
Sbjct: 1   MESGRKKRKMGNQEEEEDDEEEEEEDDEEEEEEKVEKFFALIRSTREMRDRLRNVPNGSK 60

Query: 61  ESTEGEKSK-----GVWNPKFQPEDFIEDGYYNNKSNITLQLPAASSSTTKQSNAKKEQE 120
           E  E +K +      VWNPKFQPEDF+ED    N   +             ++     +E
Sbjct: 61  EEEERKKQEEKQVAAVWNPKFQPEDFMEDSKPKNLLAV------------NEAGPSSNRE 120

Query: 121 EEQEDVDKVGKGETGLDLNLSL 129
           +EQ    K G  + GLDL LSL
Sbjct: 121 QEQGQDTKEGGEDGGLDLKLSL 130

[Close]

BLAST of Bhi06G001359 vs. ExPASy TrEMBL
Match: A0A0D2U4L1 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G208900 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-11
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 1   MEGGRKKRKLQNNEKEEEEYDEEDEDEEENMKLFYALIQNTKAMRDRMKSKESTEGEKSK 60
           ME GRKKRK+ N    EEE D+ED+DEEE ++ F+ALI++T+ MRDR++S     G K +
Sbjct: 1   MESGRKKRKMGN----EEEKDDEDDDEEEKVEKFFALIRSTREMRDRLRSAAVPNGPKEE 60

Query: 61  -------------------GVWNPKFQPEDFIEDGYYNNKSNITLQLPAASSSTTKQSNA 120
                              G WNP FQ EDF+E G  +   N +L L  A  S+   SN 
Sbjct: 61  EYQKKKQEDKAVVGGGGGVGQWNPTFQAEDFME-GSISRSGNNSLGLNVAGPSS---SNV 120

Query: 121 KKEQEEEQEDVDKVGKGETGLDLNLSL 129
           ++E E+  E  D  G+G  GLDL LSL
Sbjct: 121 QREPEKRTE--DDGGEGGGGLDLKLSL 137

The following BLAST results are available for this feature:

BLAST of Bhi06G001359 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06G001359 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi06G001359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ23	2.5e-28	68.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1	[more]
A0A6J1DQG7	2.1e-22	62.02	LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia...	[more]
A0A7J9MT72	2.8e-11	40.82	Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_015321 PE=3...	[more]
A0A061F4Z3	3.7e-11	41.55	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026807 PE=3 SV=1	[more]
A0A0D2U4L1	6.3e-11	42.18	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G208900 PE=3 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR33669:SF4	PROTEIN NIM1-INTERACTING 3	coord: 3..128
IPR031425	NPR1/NH1-interacting protein	PFAM	PF15699	NPR1_interact	coord: 23..125 e-value: 1.3E-20 score: 74.1
IPR031425	NPR1/NH1-interacting protein	PANTHER	PTHR33669	PROTEIN NEGATIVE REGULATOR OF RESISTANCE	coord: 3..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001359	Bhi06M001359	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance