Bhi06G000575 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000575
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Elongation factor 1-alpha
Location	chr6: 15338539 .. 15339048 (-)
RNA-Seq Expression	Bhi06G000575
Synteny	Bhi06G000575

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCATGAAGCTCTCCAAGAAAGCTTCTTCCCTGGTGACAATGTGGGGTTCAACGTGAAGAATGTTGCCGTGAAGGATCTCAAGCGTGGTTACGTTGCTTCAAATTCCAAGGATGATCCCGCCAAGGAAGCTGCCAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGGCAGATTGGAAATGGTTATGCCCCTGTCCTTGACTGCCACACCTCTCACATTGCAGTCAAATTTGCTGAGATTTTAACCAAGATTGACAGGCGTTCTGGTAAAGAACTCGAGAAAGAGCCCAAGTTCTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACGTTCTCCGAGTATCCTCCACTTGGGCGATTCGCCGTGAGGGACATGCGTCAAACCGTGGCTGTTGGTGTGATCAAGGCCGTCGAGAAGAAGGATGCATCCGGTGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGAAAGTGA

mRNA sequence

ATGCACCATGAAGCTCTCCAAGAAAGCTTCTTCCCTGGTGACAATGTGGGGTTCAACGTGAAGAATGTTGCCGTGAAGGATCTCAAGCGTGGTTACGTTGCTTCAAATTCCAAGGATGATCCCGCCAAGGAAGCTGCCAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGGCAGATTGGAAATGGTTATGCCCCTGTCCTTGACTGCCACACCTCTCACATTGCAGTCAAATTTGCTGAGATTTTAACCAAGATTGACAGGCGTTCTGGTAAAGAACTCGAGAAAGAGCCCAAGTTCTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACGTTCTCCGAGTATCCTCCACTTGGGCGATTCGCCGTGAGGGACATGCGTCAAACCGTGGCTGTTGGTGTGATCAAGGCCGTCGAGAAGAAGGATGCATCCGGTGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGAAAGTGA

Coding sequence (CDS)

ATGCACCATGAAGCTCTCCAAGAAAGCTTCTTCCCTGGTGACAATGTGGGGTTCAACGTGAAGAATGTTGCCGTGAAGGATCTCAAGCGTGGTTACGTTGCTTCAAATTCCAAGGATGATCCCGCCAAGGAAGCTGCCAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGGCAGATTGGAAATGGTTATGCCCCTGTCCTTGACTGCCACACCTCTCACATTGCAGTCAAATTTGCTGAGATTTTAACCAAGATTGACAGGCGTTCTGGTAAAGAACTCGAGAAAGAGCCCAAGTTCTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACGTTCTCCGAGTATCCTCCACTTGGGCGATTCGCCGTGAGGGACATGCGTCAAACCGTGGCTGTTGGTGTGATCAAGGCCGTCGAGAAGAAGGATGCATCCGGTGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGAAAGTGA

Protein sequence

MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK

Homology

[Close]

BLAST of Bhi06G000575 vs. TAIR 10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 300.8 bits (769), Expect = 6.8e-82
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHE+L E+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQ
Sbjct: 282 MHHESLLEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Bhi06G000575 vs. TAIR 10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 300.8 bits (769), Expect = 6.8e-82
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHE+L E+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQ
Sbjct: 282 MHHESLLEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Bhi06G000575 vs. TAIR 10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 300.8 bits (769), Expect = 6.8e-82
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHE+L E+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQ
Sbjct: 282 MHHESLLEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Bhi06G000575 vs. TAIR 10
Match: AT1G07940.2 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 300.8 bits (769), Expect = 6.8e-82
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHE+L E+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQ
Sbjct: 282 MHHESLLEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Bhi06G000575 vs. TAIR 10
Match: AT5G60390.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 300.8 bits (769), Expect = 6.8e-82
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHE+L E+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQ
Sbjct: 282 MHHESLLEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of Bhi06G000575 vs. ExPASy Swiss-Prot
Match: O49169 (Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=EF1 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.7e-85
Identity = 161/169 (95.27%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRG VASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 282 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGIVASNSKDDPAKEAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFS YPPLGRFAVRDMRQTVAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 402 ETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of Bhi06G000575 vs. ExPASy Swiss-Prot
Match: O64937 (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2 SV=2)

HSP 1 Score: 308.1 bits (788), Expect = 6.0e-83
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAA+FTSQVIIMNHPGQ
Sbjct: 282 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKK 167
           ETFSEYPPLGRFAVRDMRQTVAVGVIK VEKKD +GAKVTK+AAKK
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of Bhi06G000575 vs. ExPASy Swiss-Prot
Match: P34823 (Elongation factor 1-alpha OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-82
Identity = 154/166 (92.77%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFT+QVIIMNHPGQ
Sbjct: 282 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKK 167
           ETF  YPPLGRFAVRDMRQTVAVGVIK+VEKKD +GAKVTK+A KK
Sbjct: 402 ETFMSYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAIKK 446

[Close]

BLAST of Bhi06G000575 vs. ExPASy Swiss-Prot
Match: O24534 (Elongation factor 1-alpha OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 3.0e-82
Identity = 152/166 (91.57%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEAL E+  PGDNVGFNVKNVAVKDLKRG+VASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 282 MHHEALTEA-LPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKE+EKEPKFLKNGDAG VKMIPTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKK 167
           ETF+EYPPLGRFAVRDMRQTVAVGVIK+VEKKD +GAKVTK+AAKK
Sbjct: 402 ETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of Bhi06G000575 vs. ExPASy Swiss-Prot
Match: Q41803 (Elongation factor 1-alpha OS=Zea mays OX=4577 GN=EF1A PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.9e-82
Identity = 152/166 (91.57%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVAS SKDDPAKEAA+FTSQVIIMNHPGQ
Sbjct: 282 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASGSKDDPAKEAASFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAG VKM+PTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKK 167
           ETFS+YPPLGRFAVRDMRQTVAVGVIK+VEKKD +GAKVTK+AAKK
Sbjct: 402 ETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of Bhi06G000575 vs. ExPASy TrEMBL
Match: A0A5D3C390 (Elongation factor 1-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001580 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.3e-85
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 282 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 449

[Close]

BLAST of Bhi06G000575 vs. ExPASy TrEMBL
Match: A0A0A0KS27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G495940 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.6e-85
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 177 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 236

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 237 IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 296

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFS YPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK
Sbjct: 297 ETFSAYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 344

[Close]

BLAST of Bhi06G000575 vs. ExPASy TrEMBL
Match: B9RWF4 (Elongation factor 1-alpha OS=Ricinus communis OX=3988 GN=RCOM_1019090 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 282 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 341

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 342 IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 401

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 402 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of Bhi06G000575 vs. ExPASy TrEMBL
Match: B9TLU0 (Elongation factor 1-alpha, putative OS=Ricinus communis OX=3988 GN=RCOM_2159030 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 128 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 187

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 188 IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 247

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 248 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 295

[Close]

BLAST of Bhi06G000575 vs. ExPASy TrEMBL
Match: B9RWF3 (Elongation factor 1-alpha, putative OS=Ricinus communis OX=3988 GN=RCOM_1018980 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MHHEALQESFFPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 60
           MHHEALQE+  PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ
Sbjct: 128 MHHEALQEA-LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQ 187

Query: 61  IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 120
           IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV
Sbjct: 188 IGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVV 247

Query: 121 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK 170
           ETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 248 ETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 295

The following BLAST results are available for this feature:

BLAST of Bhi06G000575 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07920.1	6.8e-82	89.35	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	6.8e-82	89.35	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	6.8e-82	89.35	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.2	6.8e-82	89.35	GTP binding Elongation factor Tu family protein	[more]
AT5G60390.1	6.8e-82	89.35	GTP binding Elongation factor Tu family protein	[more]

BLAST of Bhi06G000575 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49169	3.7e-85	95.27	Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=EF1 PE=3 SV=1	[more]
O64937	6.0e-83	93.37	Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2...	[more]
P34823	2.3e-82	92.77	Elongation factor 1-alpha OS=Daucus carota OX=4039 PE=2 SV=1	[more]
O24534	3.0e-82	91.57	Elongation factor 1-alpha OS=Vicia faba OX=3906 PE=2 SV=1	[more]
Q41803	3.9e-82	91.57	Elongation factor 1-alpha OS=Zea mays OX=4577 GN=EF1A PE=3 SV=1	[more]

BLAST of Bhi06G000575 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C390	1.3e-85	98.22	Elongation factor 1-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KS27	6.6e-85	97.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G495940 PE=3 SV=1	[more]
B9RWF4	3.3e-84	96.45	Elongation factor 1-alpha OS=Ricinus communis OX=3988 GN=RCOM_1019090 PE=3 SV=1	[more]
B9TLU0	3.3e-84	96.45	Elongation factor 1-alpha, putative OS=Ricinus communis OX=3988 GN=RCOM_2159030 ...	[more]
B9RWF3	3.3e-84	96.45	Elongation factor 1-alpha, putative OS=Ricinus communis OX=3988 GN=RCOM_1018980 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 44..150 e-value: 5.0E-43 score: 147.8
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 1..43 e-value: 1.9E-6 score: 29.7
None	No IPR available	PANTHER	PTHR23115:SF268	ELONGATION FACTOR 1-ALPHA	coord: 1..167
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 1..167
None	No IPR available	CDD	cd03705	EF1_alpha_III	coord: 43..146 e-value: 2.30174E-70 score: 205.89
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 41..149 e-value: 4.5E-31 score: 107.3
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 46..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000575	Bhi06M000575	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004781	sulfate adenylyltransferase (ATP) activity
molecular_function	GO:0003746	translation elongation factor activity