Bhi06G000546 (gene) Wax gourd (B227) v1

Overview
NameBhi06G000546
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRRM domain-containing protein
Locationchr6: 14522081 .. 14527864 (-)
RNA-Seq ExpressionBhi06G000546
SyntenyBhi06G000546
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAAACTACTTCTTATCTTCATCTTCAGTGGGAAAATCGTTTATCAGAGCGGAGCAGAAATGTTCGATTCCCCGTCCCTTCAATGCCGTTTCGTCACGATTTGGCCGTCAGTGCAACACTGTTGCCATTACAATTCTCCCAATTCGACAAAATTCCGGCCACCCCATTTCAGTTTCTCTCTTGTCCATGGCTCTGGACCAATGGGGTTTCCTGTTTTCGCCATGAAGAGGTCTGGGAAAGGCGGCATGTCCCTCACTGAGCAGAGTAATTCCGACATTGAGTTCGATGATTTTTTCGATGAGGATGAGGATGATTTCCAGGACGAGGATGAAGATGAGATTCTTTTGCCGTTGAAGAATACGAGAGAGTGGCATGGGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGCGTATGATACTTCGATTGAAGACAAATTGCTACAAGAAATGGAGCAGAGTAGGGAAGCTCAGGCTGCAAATATCAATAAGCTCAATAATCAGTCTACTTCTGAGCCCAAGTCTAGTAGAAATGCCGTAGAGAAAGCAGGTCAGTCTCAATCTCTCTCAATTTTGTAACTCTTTATTCTCTAATTCTACAACCTGCTGCGGGATTGAAATGTTTATTATTGTTTACCTCGTAGTTTATTTTTTGGTAACTTAATTTTTGTGAGTACACATTTGCCCAGATAGATTAAAAGTGGAAATATCACACCATTGTGGAGATATGTGAAATCAATGGTCTCATACCTATGGTTTGAAGTTGTGATATTTTCGGATTCCAAATAAAATTAAGAGTCTTGTTGATGAATCTCTAGTTCGGACAAAAAGTGCTTGAGATGTAGCAAGCTTTATCTAATCAAGTGGATTTGGTAGGACTATATCTTTGTTTGAGAGGAGGAGATTCTACAATGTGATTCAAGGTAGTATTTTATCTGGCTTTGCTCTAGGCCTTGATTAGAGCAAACTTTCGTTGGTGGTTAGGGAGTGGAATGGATAAGGGGAGAATTTTTAGGTGCAAACAAAGTTCCTAGGGAAGGGAGAGATTCATAGTATATATGTAAGGACAATCATCTCTATTAGTTTGAGACCTCTTGAGTTGTTCCAAAATCAAATCTGAGAGAGTTTATGTCTAAAATAGACAATATCATATCATTGTGGAGATGTGTCGAGGGTTTATTGTCTTTATGTAAGAGAATGGTGCCAGAACTTAACTTGGGACTTGGGAGAGTTGATAAAATTTTGTGACGTTGGTGAACTTCATAGTCACCAAGGAAGAAGCATACGATTGTCCCAATCTAATCAAAATCTTGAGACATCACGTGTGCCCACTGATGGGCAGCAGGGTATTCTTGGTGTAGTAGTTGGATGATAAAGGCCATGTGGAATGGTACTCTGCCCTTTATAACTCGAAGTTTCCCTAGCTAGCTAAAATGTTTATGGGCTATGACACTTGTTCATTGAGATACAATTTGCCCCCAAAAAGTTGTTTTGCTCTACTGGTGAATGTGCAGAATCCCTCGAAAGTGCGTCCAATGCTGTTATTGTACAAGTAAATAAGCCAATTTTCTTGCTTCATATGTGCCCCAACGCCTATCCTTGATTTCTTGCACTCTGTCATCAATGGTTTATGAAAGTTAGTCTATGCTAAAATTGAGGTTCAATCATGGCCGGTTTGGTGTTGTAATGTCAAATCAGCTTCCTTTTTCCAGCCAAATCGATTTATTTTGAATTGCGGTTCTACTTTACCTAGTTAAACAAGGAACCTTTATAGTTCTTTGAAATCTTGAGGTTGACCAATTCAAAACATAGCTTAGAAGGGTTTTCTTGCACCTCTTGTTGAAACATTGGGAAAAATCTCCCATACCGCAAGAATGAGCAGAAAAATAATAGAGAAATTAAAAGAAAGCAATAAAACTGGAAACACAAGATTTAACGTGAAAAAACTCCAAACTGGAAAGAAACCACATGCCAGAAAAATCTCTCATCGACCCTAATTACAAAAGCATTTTCTCAAACCTAATTACAAAAGCGTTTTCTCAACACATTATACAACTCATAAGGTCGTTTTATAGTGCTTGGAGCCCCATGACTTGCTTGAACTTTTTAGATGTAGGACAGCTACGCTAATGTTTTGCCAAAACCTAAAGATGATTTGGTCTGGGCTGGGTACTCAAATGTTGTTGTTGGCTGTGCAAGAAACACATTTCTTCACATTAGCATAAAAGTTATGCACTAATAAGTCTTCTAACCCCAAGCATAGATGGTCCATGTGCTACTCCAAATTTTTTATGGAGATCAAGTTATATCATCAAAGAACTATAAATCTAAGAATTAGCAATGTAAAATCTGCTGGAAGTCTCTAATTTCAATAAGAATCATGTTTTGTGTAACACTAATCTCATTAATGCACAAAATTGACCATTGTAATTCTACCAAAACCCACAAATTAAAAAAAGATAAAAACAATTACAGTGTTATTATTATTAAATTTTTTGAAATCCTATTAATTGTACACCAGACGTCTTATGATTTTCTGGGGACACATGAGTGATGAAAATATTTTTATTGGCAATTCCACTAAAGAAAACCTACAAAGAGATAAGAATTATAACACTTTTTCAAGTTTAAGGTAATGATGACAATACTTTTTTAAGTTGAGAATATAGATTGCAACAATTGTCCAAGTTTGAGGTGCAATTCTATTGAATTGGAAGTCTAGGATAAATTGATATATATTGCAAAGTTCGTTGTGTAGAAGTTGATTTTTCCCATAAATAGAAATACCACAAATCACAGAATTACACTCTATTTATAACCCTGCAATAATAATGAAAAAGAGAATTTCTTCTGATCACGTCCTGTCTGAATTTTAGCCACACTGATGTATGAAATCCACTCTAGACTTGTAAAAGGCTTAATTATTAATGAACGTTAGTCATTCTAATTCTTCTACTTGTTTATTCTTTCTAATTTGATCTAACTTGAGTATCATGCATTTCTTCATCTCCAGAGATTGTTAGTACTGGAGTTCGTGTACGCATTGTCAACCTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAATGGTTTCCTGGAATAATCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCTGAAGGAGATGCCTTAAGGTATGTTTATGGACGAGAAGAAATTATAGAACCAATAGAAATTTAGTTCTAATCTTTTTCATAAGCGTTAGCTTCGAAATACCAGACTTATTTAGTAAAAAAAAAAAAAGGTAGCACAGCAGCAATAAAATTGGTGAAGTACATTTTAATTCAAAACTCTTGAATGGTTTTTGTCTGATTATTCTTTCACTGTCATTTTTTGGTATTAGAAACATTTCATTGATAATGAGAAAACCCAACACCAAAATGTGATCATAGTAAAAGTCTCCAATTGGAGATTAAATAAGATAAGCTGAAGTGAGGAAATGGGTGCTTAGTTTTACGCTAAAAAAAGAAGAAAAAAGGAAGAAAAGCAGTAGAAACTAAAAAGAACTAAATCCATAAAACGATCAAAAGAGGAAAACGAGCCTTTGAAAAGATGGCTATTACACTCGCCCCAAAGATTCCAGAAGAAAGTCTGGAAAAGAGCCTACCAAATCGCCTTCTTTGTACCACCAAAAGGATGAATGACCAGTAATGATGCAAGAATATCAAAAATATTCTTGGAGCATGGAAATGACCACCCAGCTTCAAAAATAATTTGCTTGAAAAGAGATGCAACGAAACAATGCATAAAAGGATGAGCTGGTGTCTCAGCATTTTGCTGACACGTGGCACCAATAAGGATAAAGGTGCATGAAAGGCATTCTTCTTTCACTATTGAGGGGGTTTTTATATTTTCTTGAAGAAAAGTAGGGGAAAGACATTAAGTCAGTCGATGTTTAGTAGATTTCCTTCATAGGCAAATTGCTAGTAAGACTGAGGTTTCAATCCAATGGTAACTAACTTATAAAGACACCTTTAATAACCTATGGGAAGCCATCTCTCTTTGCCTTCCAGAGTTTTGTTCTGTCCTCACCTTTTAAGTAAGAATGGCGGTAGAGTCTGGATTCTGGTAAAGATCTTTTTGGCTTTGTTTTGGACCTCTCTCTTTACAGTTCTACTTCTTTGATGTCTGCCTCTATCTAAAATTTTTACATCTTTTCTTGTCTCTTGTTCAGAAGTTGGAACAAACTCCTTTGGATTTCAGTTCCGTAGGGCTCTCCTTGATTGAAAGATTAAAGAGTCAGTTTCTTTGTCTTTCGTTCAACCATTGGTTCTTTCACCTAGGTACATAGACCTACGTTTGTGTGCCTCTCTCTATACTTTGTTATTTTAGCTTCTTCATGGAAGTTAGTTTCCATTATTGAAATAAAAATGTGTTAGCTATTTACATCTGTGCATTCTGAGATCATCAAGTGTTAGCCATATAAATTTGTACATTTTGAGACCATCAGATCTTTTCATTTCTTGGCATCATCTTTATGAATGGTTTCTAGGTCTCATCTAAAACATGGCAACATTTCATGCATGCATAAGCCTTGATAAATTGGTAAAAGAGTGACATTCATTTTCTTCAGTCTTTTGCAGGCATTTTCTGGACGATATCTTACGTTTGGAAGGGTTCAAAAGCAAATAAAATGTGAAATAATGAACCGAAAAACTTTGAGTTCAACTCGCAAAAGTTCAGTGGGTAGTACGAATCATTCTCAATTAAATATTCTTGAGGAGGAAGCAGAACGGTTTGTTGACATAGACGTGGATTTAGCCGGTGAATTCATGAGAACAAGGATCGAGGATATTGAAGACAGTCTGCCATATGTCAGTGAATTACATTCGGATGGTGAAGATGACAATGGTGTAGAATCAAGAACAGAGTCCAAAATTCAGTCACCATCCCAAGAGGAAGTAAATAAAATTCATGAACGGGAAGAAATTCTTGCTCAAGAAAGAGAGGAAGTTGATAGGGAAATTTCACCCATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAATCATTGAAAGAAATTCCAGGATCTGCCAAAAGGTCTTTGCTGCTTCAAGTGATTATTTAGAACATGGTTTTACATTCTACGCTTTGAAAAAGCTAACAAAATCTGCTTTTTATGTTAATGAATAATGCAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAATAAATCAGCTTTGGTTTCAAAAGAAGGGAACTAAAGGGAGTGGATAATCTCTGAAATTAAGAACGTAAGAACTTGAACCCAAAAAACTCAGATGAAATGTGATTGAAATGCATACACTTCATTTTCTGGGTGGTGATTATACAAATCAAATTTGTTCAGTTAGAGGGCCCTTTTATGGATTTTGTGATACATAATTCTTGGCCCTTCTATCAAGGGTATTGCCATTTCAAGTCAAATTCCTGCCAAAAAAAATAAATGAGAATTATGTTGTTGAAATAGTTGGAATCAGCTATACTATAGAAAGTAATTTGGAGTTGATAACAGTAGAGAGTTTTTTCAAGTTCATGGTTGTGTTGGGATAATGGGTGCCTTTGGTACATATTTTTAGCATTTTTGCCTCTTACAAAATTAAGGTGTTATTGTTCTATAACATATTGCAGATTAGTATGTTAGACATTACAAATCTTTTATTACTCTCAAAATGGGGA

mRNA sequence

TGCAAAACTACTTCTTATCTTCATCTTCAGTGGGAAAATCGTTTATCAGAGCGGAGCAGAAATGTTCGATTCCCCGTCCCTTCAATGCCGTTTCGTCACGATTTGGCCGTCAGTGCAACACTGTTGCCATTACAATTCTCCCAATTCGACAAAATTCCGGCCACCCCATTTCAGTTTCTCTCTTGTCCATGGCTCTGGACCAATGGGGTTTCCTGTTTTCGCCATGAAGAGGTCTGGGAAAGGCGGCATGTCCCTCACTGAGCAGAGTAATTCCGACATTGAGTTCGATGATTTTTTCGATGAGGATGAGGATGATTTCCAGGACGAGGATGAAGATGAGATTCTTTTGCCGTTGAAGAATACGAGAGAGTGGCATGGGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGCGTATGATACTTCGATTGAAGACAAATTGCTACAAGAAATGGAGCAGAGTAGGGAAGCTCAGGCTGCAAATATCAATAAGCTCAATAATCAGTCTACTTCTGAGCCCAAGTCTAGTAGAAATGCCGTAGAGAAAGCAGAGATTGTTAGTACTGGAGTTCGTGTACGCATTGTCAACCTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAATGGTTTCCTGGAATAATCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCTGAAGGAGATGCCTTAAGTCTTTTGCAGGCATTTTCTGGACGATATCTTACGTTTGGAAGGGTTCAAAAGCAAATAAAATGTGAAATAATGAACCGAAAAACTTTGAGTTCAACTCGCAAAAGTTCAGTGGGTAGTACGAATCATTCTCAATTAAATATTCTTGAGGAGGAAGCAGAACGGTTTGTTGACATAGACGTGGATTTAGCCGGTGAATTCATGAGAACAAGGATCGAGGATATTGAAGACAGTCTGCCATATGTCAGTGAATTACATTCGGATGGTGAAGATGACAATGGTGTAGAATCAAGAACAGAGTCCAAAATTCAGTCACCATCCCAAGAGGAAGTAAATAAAATTCATGAACGGGAAGAAATTCTTGCTCAAGAAAGAGAGGAAGTTGATAGGGAAATTTCACCCATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAATCATTGAAAGAAATTCCAGGATCTGCCAAAAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAATAAATCAGCTTTGGTTTCAAAAGAAGGGAACTAAAGGGAGTGGATAATCTCTGAAATTAAGAACGTAAGAACTTGAACCCAAAAAACTCAGATGAAATGTGATTGAAATGCATACACTTCATTTTCTGGGTGGTGATTATACAAATCAAATTTGTTCAGTTAGAGGGCCCTTTTATGGATTTTGTGATACATAATTCTTGGCCCTTCTATCAAGGGTATTGCCATTTCAAGTCAAATTCCTGCCAAAAAAAATAAATGAGAATTATGTTGTTGAAATAGTTGGAATCAGCTATACTATAGAAAGTAATTTGGAGTTGATAACAGTAGAGAGTTTTTTCAAGTTCATGGTTGTGTTGGGATAATGGGTGCCTTTGGTACATATTTTTAGCATTTTTGCCTCTTACAAAATTAAGGTGTTATTGTTCTATAACATATTGCAGATTAGTATGTTAGACATTACAAATCTTTTATTACTCTCAAAATGGGGA

Coding sequence (CDS)

ATGTTCGATTCCCCGTCCCTTCAATGCCGTTTCGTCACGATTTGGCCGTCAGTGCAACACTGTTGCCATTACAATTCTCCCAATTCGACAAAATTCCGGCCACCCCATTTCAGTTTCTCTCTTGTCCATGGCTCTGGACCAATGGGGTTTCCTGTTTTCGCCATGAAGAGGTCTGGGAAAGGCGGCATGTCCCTCACTGAGCAGAGTAATTCCGACATTGAGTTCGATGATTTTTTCGATGAGGATGAGGATGATTTCCAGGACGAGGATGAAGATGAGATTCTTTTGCCGTTGAAGAATACGAGAGAGTGGCATGGGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGCGTATGATACTTCGATTGAAGACAAATTGCTACAAGAAATGGAGCAGAGTAGGGAAGCTCAGGCTGCAAATATCAATAAGCTCAATAATCAGTCTACTTCTGAGCCCAAGTCTAGTAGAAATGCCGTAGAGAAAGCAGAGATTGTTAGTACTGGAGTTCGTGTACGCATTGTCAACCTTCCTAAAAAAAAGAACATTCACAGAGACCTGATCGTGGCTTTTAAATGGTTTCCTGGAATAATCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCTGAAGGAGATGCCTTAAGTCTTTTGCAGGCATTTTCTGGACGATATCTTACGTTTGGAAGGGTTCAAAAGCAAATAAAATGTGAAATAATGAACCGAAAAACTTTGAGTTCAACTCGCAAAAGTTCAGTGGGTAGTACGAATCATTCTCAATTAAATATTCTTGAGGAGGAAGCAGAACGGTTTGTTGACATAGACGTGGATTTAGCCGGTGAATTCATGAGAACAAGGATCGAGGATATTGAAGACAGTCTGCCATATGTCAGTGAATTACATTCGGATGGTGAAGATGACAATGGTGTAGAATCAAGAACAGAGTCCAAAATTCAGTCACCATCCCAAGAGGAAGTAAATAAAATTCATGAACGGGAAGAAATTCTTGCTCAAGAAAGAGAGGAAGTTGATAGGGAAATTTCACCCATCAAAGGGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAATCATTGAAAGAAATTCCAGGATCTGCCAAAAGGTTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAATAAATCAGCTTTGGTTTCAAAAGAAGGGAACTAA

Protein sequence

MFDSPSLQCRFVTIWPSVQHCCHYNSPNSTKFRPPHFSFSLVHGSGPMGFPVFAMKRSGKGGMSLTEQSNSDIEFDDFFDEDEDDFQDEDEDEILLPLKNTREWHGARPRGFGEGKAYDTSIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEKAEIVSTGVRVRIVNLPKKKNIHRDLIVAFKWFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSLLQAFSGRYLTFGRVQKQIKCEIMNRKTLSSTRKSSVGSTNHSQLNILEEEAERFVDIDVDLAGEFMRTRIEDIEDSLPYVSELHSDGEDDNGVESRTESKIQSPSQEEVNKIHEREEILAQEREEVDREISPIKGKTKVSKKKQPKEKGEKKSLKEIPGSAKRLRIKEKAVLTDVYSRYGNKSALVSKEGN
Homology
BLAST of Bhi06G000546 vs. TAIR 10
Match: AT1G70200.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 186.8 bits (473), Expect = 3.6e-47
Identity = 161/474 (33.97%), Postives = 229/474 (48.31%), Query Frame = 0

Query: 49  GFPVFAMKRSGKGGMSLTEQSNSDIEFD----DFFDEDEDDFQDEDEDEILLPLKNTREW 108
           GF  FA+ +   G   + E  + D E D    +F  EDE + ++EDE E  LP+   ++W
Sbjct: 62  GFCSFAVNKRRSGDSVIVESDDDDEEDDEDWGEFDGEDEGEEEEEDEGE-FLPMDKMKKW 121

Query: 109 HGARPRGFGEGKAYDTSIEDKLLQEMEQSREAQAANINKLNNQ--STSEPKSSRNAVEKA 168
              +PRGFG GK Y+T IEDKLL E+EQS +AQAAN+NKL N    + + K   N ++  
Sbjct: 122 LEKKPRGFGLGKKYETLIEDKLLDEIEQSWKAQAANLNKLKNDPLKSQQLKRDDNLLKGT 181

Query: 169 EIVSTGVRVRIVNLPKKKNIHRDLIVAFKWFPGIINITPAVIGNKKTRDPICKGFAFVDC 228
                G RVR+ NLPKKKN+HRDL VAFK   G+++ITPAV GNKKT+DP+CKGFA VD 
Sbjct: 182 GETQIGFRVRVTNLPKKKNVHRDLKVAFKEVSGVLSITPAVSGNKKTKDPVCKGFAHVDF 241

Query: 229 KSEGDALSLLQAFSGRYLTFGRVQKQIKCEIMNRKTLSSTRKSSV-------------GS 288
           K+E DA   ++ F+G+ L FG+V KQIKC+++   +  S  K                G 
Sbjct: 242 KTEIDANRFVKQFTGQSLAFGKVIKQIKCQVVEFTSDDSVSKEVYLDNGFKVQKLPYSGL 301

Query: 289 TNHSQLNILEEEA----------------ERFVDIDV--DLAGEFMRTRIEDIEDS---- 348
              S  +++EEE                 ER V+ D    ++     + IE   DS    
Sbjct: 302 EGDSSADVVEEEVLLGSGEESDDSEEEVDEREVEDDERNHISSSIESSPIEMTRDSNTKL 361

Query: 349 ------------------LPYVS-----------ELHSDGEDDNGVESRT---------- 408
                              P VS           E H D E      + T          
Sbjct: 362 KFEKQVVKREIREHEELETPLVSFQVNKSEEAAAETHLDDEQSEEAVAETLLNDELDGDD 421

Query: 409 ------------ESKIQSPSQEEVNKIHEREE-ILAQER--------EEVDREISPIKGK 419
                        S + S  +  V++I   E+ +L +E+        ++ + + + ++GK
Sbjct: 422 EEEVAEDNLEPLNSSLSSSEENRVDRIRRLEQKLLGKEKLLGGGVGFDKPEAKPARVEGK 481

BLAST of Bhi06G000546 vs. ExPASy TrEMBL
Match: A0A1S3CPG6 (uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 3.6e-180
Identity = 342/430 (79.53%), Postives = 374/430 (86.98%), Query Frame = 0

Query: 1   MFDSPSLQCRFVTIWPSVQHCCHYNSPNSTKFRPPHFSFSLVHGSGPMGFPVFAMKRSGK 60
           M DS  L CRF TI P +QH CHYNS NSTKFRPPH + SL+ GSGPMGFPVFAMKR GK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGMSLTEQSNSDIEFDDFFDEDEDDFQDE------DEDEILLPLKNTREWHGARPRGFGE 120
           GG++LT+ S+SDI+FD+FFDEDED+FQDE      DEDEILLPLKNTREWH ARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKAYDTSIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEKA--EIVSTGVRVR 180
           GK YDTSIEDKLLQEMEQ REAQAANINKL NQ +S+P SSRN VE A  EIVSTGVRVR
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQFSSKPNSSRNVVEIAAPEIVSTGVRVR 180

Query: 181 IVNLPKKKNIHRDLIVAFKWFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSLL 240
           I+NLPKKKNI+RDL+VAFK FPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALS L
Sbjct: 181 IINLPKKKNINRDLVVAFKGFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSFL 240

Query: 241 QAFSGRYLTFGRVQKQIKCEIMNRKTLSSTRKSSVGSTNHSQLNILEEEAERFVDIDVDL 300
           QAFSGRYL+FGRVQKQIKCEIMNR+T SS RKSSVGSTN+S+L+ILEEEAE+F DIDVDL
Sbjct: 241 QAFSGRYLSFGRVQKQIKCEIMNRQTSSSARKSSVGSTNNSRLSILEEEAEQFADIDVDL 300

Query: 301 AGEFMRTRIEDIEDSLPYVSELHSDGEDDNGVESRTESKIQSPSQEEVNKIHEREEILAQ 360
           A E  RT+IE+ ED L YV+E HS   DDNGVESRTE KIQSPS++EVNKI E E IL Q
Sbjct: 301 ASEAARTKIEENEDDLAYVNESHSHDVDDNGVESRTEFKIQSPSEKEVNKIDELEGILLQ 360

Query: 361 EREEVDREISPIKGKTKVSKKKQPKEKGEKKSLKEIPGSAKRLRIKEKAVLTDVYSRYGN 420
            +EE+ RE+SPIK KTKVSKKKQPKEKGEKK L EIPGSAKRLRIKEKAVLTDVYSRYG 
Sbjct: 361 GKEEIHREVSPIKRKTKVSKKKQPKEKGEKKLLTEIPGSAKRLRIKEKAVLTDVYSRYGK 420

Query: 421 KSALVSKEGN 423
           KSAL+S+EG+
Sbjct: 421 KSALLSEEGS 430

BLAST of Bhi06G000546 vs. ExPASy TrEMBL
Match: A0A0A0KQN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 2.4e-176
Identity = 337/424 (79.48%), Postives = 366/424 (86.32%), Query Frame = 0

Query: 1   MFDSPSLQCRFVTIWPSVQHCCHYNSPNSTKFRPPHFSFSLVHGSGPMGFPVFAMKRSGK 60
           MFDS  L C F TI P +QH CHYNS  STKFRPPH + SL+  SGPMGFPVFA+KR GK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GGMSLTEQSNSDIEFDDFFDEDEDDFQDEDEDEILLPLKNTREWHGARPRGFGEGKAYDT 120
           GG++LTE S+SDI FD+FFDE ED+FQ  DED+ILLPLKNT+EWH ARPRGFGEGK YDT
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQ--DEDDILLPLKNTKEWHAARPRGFGEGKVYDT 160

Query: 121 SIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEKA--EIVSTGVRVRIVNLPK 180
           SIED LLQEMEQ REAQAANINKL +QS+S P SSRN VE A  EIVSTGV VRI+NLP+
Sbjct: 161 SIEDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIAAPEIVSTGVCVRIINLPR 220

Query: 181 KKNIHRDLIVAFKWFPGIINITPAVIGNKKTRDPICKGFAFVDCKSEGDALSLLQAFSGR 240
           KKNIHRDL+VAFK FPGIINITPAVIGNKKTRDP+CKGFAFVDCKSEGDALS LQAF+GR
Sbjct: 221 KKNIHRDLVVAFKGFPGIINITPAVIGNKKTRDPVCKGFAFVDCKSEGDALSFLQAFAGR 280

Query: 241 YLTFGRVQKQIKCEIMNRKTLSSTRKSSVGSTNHSQLNILEEEAERFVDIDVDLAGEFMR 300
           YLTFGRVQKQIKCEIMNR+T SS R SS+ STNHS+L+ILEEEAE+FVDIDVDLA E  R
Sbjct: 281 YLTFGRVQKQIKCEIMNRQTSSSARNSSMSSTNHSRLSILEEEAEQFVDIDVDLASEATR 340

Query: 301 TRIEDIEDSLPYVSELHSDGEDDNGVESRTESKIQSPSQEEVNKIHEREEILAQEREEVD 360
           T+ EDIED L YVSE HS  EDDNGVESRTE  IQSPS++EVNKI E EEIL Q REE+ 
Sbjct: 341 TKTEDIEDDLAYVSESHSHEEDDNGVESRTEFTIQSPSEKEVNKI-ELEEILPQGREEIH 400

Query: 361 REISPIKGKTKVSKKKQPKEKGEKKSLKEIPGSAKRLRIKEKAVLTDVYSRYGNKSALVS 420
           RE+SPIK KTKVSKKKQPKEKGEKK L EIPGSAKRLRIKEKAVLTDVYSRYG KSALVS
Sbjct: 401 REVSPIKRKTKVSKKKQPKEKGEKKLLTEIPGSAKRLRIKEKAVLTDVYSRYGKKSALVS 460

Query: 421 KEGN 423
           +EGN
Sbjct: 461 QEGN 461

BLAST of Bhi06G000546 vs. ExPASy TrEMBL
Match: A0A6J1KJD4 (uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.8e-156
Identity = 310/438 (70.78%), Postives = 350/438 (79.91%), Query Frame = 0

Query: 1   MFDSPSLQCRFVTIWPSVQHCCHYNS--------------PNSTKFRPPHFSFSLVHGSG 60
           M DSP L CRF+T WPS  H    NS              PNSTKFR  HFS SLVHG  
Sbjct: 23  MLDSPPLHCRFITTWPSAPHSRRNNSLLLPTPYYNLQPCNPNSTKFRSLHFSLSLVHGPR 82

Query: 61  PMGFPVFAMKRSGKGGMSLTEQSNSDIEFDDFFDEDEDDFQDEDEDEILLPLKNTREWHG 120
           PM FPVF++K+ GKGG+SLT QS+SDIEFD   DED D       DE+LLPL N REW  
Sbjct: 83  PMYFPVFSLKKRGKGGVSLTNQSDSDIEFDG--DEDLDG------DEMLLPLANMREWLA 142

Query: 121 ARPRGFGEGKAYDTSIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEK--AEI 180
           ARPRGFGEGK YDTSIE+KLLQE+EQSR+AQAANINKL +Q  S P SSRN V+K   EI
Sbjct: 143 ARPRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSSRNVVDKEAPEI 202

Query: 181 VSTGVRVRIVNLPKKKNIHRDLIVAFKWFPGIINITPAVIGNKKTRDPICKGFAFVDCKS 240
            +TGVRVR++NLPKK+NIHRDL++AFK FPGI+NITPAVIGNKKTRDPICKGFAFVDCKS
Sbjct: 203 ANTGVRVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKS 262

Query: 241 EGDALSLLQAFSGRYLTFGRVQKQIKCEIMNRKTLSSTRKSSVGSTNHSQLNILEEEAER 300
           EGDA+S LQ+FSG+YLTFGRVQKQIKCEIMN++T +  R+ SV STNHS+L+ILEE+AE+
Sbjct: 263 EGDAISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNLAREISVVSTNHSRLSILEEKAEQ 322

Query: 301 FVDIDVDLAGEFMRTRIEDIEDSLPYVSELHSDGEDDNGVESRTESKIQSPSQEEVNKIH 360
             D+D+DLAGE  RTR+EDIED+L YVSELHSD +DDNGVESRTESKI  PS++E++KIH
Sbjct: 323 VADMDMDLAGEVERTRVEDIEDNLAYVSELHSD-DDDNGVESRTESKILPPSEKELDKIH 382

Query: 361 EREEILAQEREEVDREISPIKGKTKVSKKKQPKEKGEKKSLKEIPGSAKRLRIKEKAVLT 420
           E EEI  Q REEV RE  PI  KT+VSKKKQPKEKGE KS   IPGSAKRLRIKEKAVLT
Sbjct: 383 ELEEIPPQGREEVHREAPPIYMKTRVSKKKQPKEKGENKSSLVIPGSAKRLRIKEKAVLT 442

Query: 421 DVYSRYGNKSALVSKEGN 423
           DVYSRYG KSAL SKEGN
Sbjct: 443 DVYSRYGKKSALASKEGN 451

BLAST of Bhi06G000546 vs. ExPASy TrEMBL
Match: A0A6J1G3T4 (uncharacterized protein LOC111450524 OS=Cucurbita moschata OX=3662 GN=LOC111450524 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 9.8e-154
Identity = 309/441 (70.07%), Postives = 347/441 (78.68%), Query Frame = 0

Query: 1   MFDSPSLQCRFVTIWPSVQH-------------CCHYN----SPNSTKFRPPHFSFSLVH 60
           M DSP L CRF T WPS  H                YN    +PNSTKFR  HFS SLVH
Sbjct: 1   MLDSPPLHCRFFTTWPSAPHSRLNTSLLLPTPYTAPYNLQPCNPNSTKFRSLHFSLSLVH 60

Query: 61  GSGPMGFPVFAMKRSGKGGMSLTEQSNSDIEFDDFFDEDEDDFQDEDEDEILLPLKNTRE 120
           G  PM FPV A+K+ GKGG+SLT+QS+SD EFD   DED D       DE+LLPL N RE
Sbjct: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDG--DEDLDG------DEMLLPLANMRE 120

Query: 121 WHGARPRGFGEGKAYDTSIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEK-- 180
           W  ARPRGFGEGK YDTSIE+KLLQE+EQSR+AQAANINKL +Q  S P S RN V+K  
Sbjct: 121 WLAARPRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVVDKEA 180

Query: 181 AEIVSTGVRVRIVNLPKKKNIHRDLIVAFKWFPGIINITPAVIGNKKTRDPICKGFAFVD 240
            EI +TGVRVRI+NLPKK+NIHRDL++AF+ FPGI+NITPAVIGNKKTRDPICKGFAFVD
Sbjct: 181 PEIANTGVRVRIINLPKKRNIHRDLMLAFEGFPGIVNITPAVIGNKKTRDPICKGFAFVD 240

Query: 241 CKSEGDALSLLQAFSGRYLTFGRVQKQIKCEIMNRKTLSSTRKSSVGSTNHSQLNILEEE 300
           CKSEGDA+S LQ+FSG+YLTFGRVQKQIKCEIMN++T +S R+ SV STN S+L+ILEEE
Sbjct: 241 CKSEGDAISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEE 300

Query: 301 AERFVDIDVDLAGEFMRTRIEDIEDSLPYVSELHSDGEDDNGVESRTESKIQSPSQEEVN 360
           AE+  DID+DLAGE  RTR+ED+ED+L YVSEL SD EDDNGVESRTESKI   S++E++
Sbjct: 301 AEQVADIDMDLAGEVERTRVEDVEDNLAYVSELDSDDEDDNGVESRTESKILPLSEKELD 360

Query: 361 KIHEREEILAQEREEVDREISPIKGKTKVSKKKQPKEKGEKKSLKEIPGSAKRLRIKEKA 420
           KIHE EE+  Q REEV RE  PI  KTKVSKKKQPKEKGEKKS   IPGSAKRLRIKEKA
Sbjct: 361 KIHELEEMPPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKA 420

Query: 421 VLTDVYSRYGNKSALVSKEGN 423
           VLTDVYSRYG KSAL SKEGN
Sbjct: 421 VLTDVYSRYGKKSALASKEGN 433

BLAST of Bhi06G000546 vs. ExPASy TrEMBL
Match: A0A6J1DEC7 (uncharacterized protein LOC111019305 OS=Momordica charantia OX=3673 GN=LOC111019305 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 2.6e-138
Identity = 278/401 (69.33%), Postives = 323/401 (80.55%), Query Frame = 0

Query: 25  NSPNSTKFRPPHFSFSLVHGSGPMGFPVFAMKRSGKGGMSLTEQSNSDIEFDDFFDEDED 84
           ++PNSTKF  PHF  SLVH    +GF VFA K+ G+G   + + ++SDIEFD+FFDE   
Sbjct: 40  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDE--- 99

Query: 85  DFQDEDEDEILLPLKNTREWHGARPRGFGEGKAYDTSIEDKLLQEMEQSREAQAANINKL 144
                 E+E+LLPLK  +EW   RPRGFGEGK YDTSIEDKLLQE+EQSR AQAANINKL
Sbjct: 100 ------EEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKL 159

Query: 145 NNQSTSEPKSSRNA--VEKAEIVSTGVRVRIVNLPKKKNIHRDLIVAFKWFPGIINITPA 204
            NQS SE  SS++   V+ ++I STG  VRIVNLPKKKNIHRDL+VAFK FPGIINI PA
Sbjct: 160 KNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPA 219

Query: 205 VIGNKKTRDPICKGFAFVDCKSEGDALSLLQAFSGRYLTFGRVQKQIKCEIMNRKTLSST 264
           V+GNKKTRDPICKGFAFVDCKSEGDA+  LQ FSG+YLTFGRVQKQIKCE++NR+T +S 
Sbjct: 220 VVGNKKTRDPICKGFAFVDCKSEGDAIRFLQTFSGQYLTFGRVQKQIKCEMINRRTSTSA 279

Query: 265 RKSSVGSTNHSQLNILEEEAERFVDIDVDLAGEFMRTRIEDIEDSLPYVSELHSDGEDDN 324
            +SSVGST H+   I E EAE+  D+D DL+ E +RTR+ED+E++L  VSELHSD ED+ 
Sbjct: 280 CESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNE 339

Query: 325 GVESRTESKIQSPSQEEVNKIHEREEILAQEREEVDREISPIKGKTKVSKKKQPKEKGEK 384
             ESRTESKI+SPS++E+ +IHE EEIL   REE+ REI PIKGK KVSKKKQPKEKGEK
Sbjct: 340 DAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEK 399

Query: 385 KSLKEIPGSAKRLRIKEKAVLTDVYSRYGNKS-ALVSKEGN 423
           KSL EIPGSAKRLR+KEKAVLTDVYSRYGNKS ALVSKEGN
Sbjct: 400 KSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN 427

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G70200.13.6e-4733.97RNA-binding (RRM/RBD/RNP motifs) family protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CPG63.6e-18079.53uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=... [more]
A0A0A0KQN32.4e-17679.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1[more]
A0A6J1KJD42.8e-15670.78uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728... [more]
A0A6J1G3T49.8e-15470.07uncharacterized protein LOC111450524 OS=Cucurbita moschata OX=3662 GN=LOC1114505... [more]
A0A6J1DEC72.6e-13869.33uncharacterized protein LOC111019305 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..391
NoneNo IPR availablePANTHERPTHR37200RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 13..421
NoneNo IPR availableCDDcd00590RRM_SFcoord: 171..244
e-value: 2.48929E-4
score: 37.2845
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 115..253
e-value: 4.8E-6
score: 28.6
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 134..263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000546Bhi06M000546mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding