Bhi06G000049 (gene) Wax gourd (B227) v1

Overview
NameBhi06G000049
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionstress-induced protein KIN2-like
Locationchr6: 1205907 .. 1206725 (+)
RNA-Seq ExpressionBhi06G000049
SyntenyBhi06G000049
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAACCATTTTCACCGAGTCTTTAATTAACCCTCAAGTTCTAAGCTCCTAATTTCTGTGTTTTTAAAATTCATTATAAAAAATAATGGATAACTCTCAAAAAATGAAATATCATGCTGGAGAAGCCAAGGGTCAAACTCAGGTTTTTAAATTTAACCATCTTACTCTTTTATCAATTCATATTACATTATTATATTTTTAATATTTTATGGTAAAATTGATTATAAAATGATTTGGTATCAATTGTTTAATATAATAATTTTTTCCTCAATGGGTTTGTGTGTGTTATTTGTTAATATCACTTTTTATTCTTTTATTTCATGGATTCTATATTGCTTTTATTAGTTGTGTTGAAGCATTTCCATGCCTAGCTTGTACGATTAAGGAGTGATAGAGTAACATATTAGTTTGTGTTGTTATGCAGGAGAAGGTGAGCAATATGATGGACAAGGCAGCTGATGCAGCTCAATCAGCTAAAGAATCAATGCAAGAAGCAGGGCAACAGGTGAAGGCCAAAGTACAAGGAGCTGCTGATGTTGTCAAGGATGCAATTAACAAATGAAAACGTCATCTATTTGTACTCTTTTTTAATTTTTGAAGGTTTCAATTTTGTTCTTACTTAGACTTATTCTCTTTCCTTTTGTTGAATAAAGCCATTATTATGTAAGAGCCTTGAAAAAAAGTCACATATGGCTCATAAGCCTTTTCTGTCAATAAGAATTATGGCTAGTTGACATGGGTCAAAACCTAGTTTGTTTTTGTAGTCTGATTACAGATTATAATTATGGCACAAAAATATAAAGAAAATTAAGCAAAAA

mRNA sequence

CTAAAACCATTTTCACCGAGTCTTTAATTAACCCTCAAGTTCTAAGCTCCTAATTTCTGTGTTTTTAAAATTCATTATAAAAAATAATGGATAACTCTCAAAAAATGAAATATCATGCTGGAGAAGCCAAGGGTCAAACTCAGGAGAAGGTGAGCAATATGATGGACAAGGCAGCTGATGCAGCTCAATCAGCTAAAGAATCAATGCAAGAAGCAGGGCAACAGGTGAAGGCCAAAGTACAAGGAGCTGCTGATGTTGTCAAGGATGCAATTAACAAATGAAAACGTCATCTATTTGTACTCTTTTTTAATTTTTGAAGGTTTCAATTTTGTTCTTACTTAGACTTATTCTCTTTCCTTTTGTTGAATAAAGCCATTATTATGTAAGAGCCTTGAAAAAAAGTCACATATGGCTCATAAGCCTTTTCTGTCAATAAGAATTATGGCTAGTTGACATGGGTCAAAACCTAGTTTGTTTTTGTAGTCTGATTACAGATTATAATTATGGCACAAAAATATAAAGAAAATTAAGCAAAAA

Coding sequence (CDS)

ATGGATAACTCTCAAAAAATGAAATATCATGCTGGAGAAGCCAAGGGTCAAACTCAGGAGAAGGTGAGCAATATGATGGACAAGGCAGCTGATGCAGCTCAATCAGCTAAAGAATCAATGCAAGAAGCAGGGCAACAGGTGAAGGCCAAAGTACAAGGAGCTGCTGATGTTGTCAAGGATGCAATTAACAAATGA

Protein sequence

MDNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKDAINK
Homology
BLAST of Bhi06G000049 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 74.3 bits (181), Expect = 3.9e-14
Identity = 38/59 (64.41%), Postives = 52/59 (88.14%), Query Frame = 0

Query: 2  DNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKD 61
          +NSQ M ++AG+AKGQTQEK SN++DKA++AAQSAKES+QE GQQ+K K QGA++ +K+
Sbjct: 3  NNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIKE 61

BLAST of Bhi06G000049 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-13
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1  MDNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKD 60
          MDN Q   Y AG+A GQT+EK   MMDKA DAA SA++S+Q+ GQQ+K K QGAADVVKD
Sbjct: 1  MDNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKD 60

BLAST of Bhi06G000049 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-13
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 3  NSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKDA 62
          NSQ + + AG+AKGQTQEK S MMDKA++AAQSAKES++E GQQ+K K QGA + VK+A
Sbjct: 4  NSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVKNA 62

BLAST of Bhi06G000049 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-18
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 2  DNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKDA 61
          DNSQKM YHAGEAKGQTQEK+SNMMDKA+DAAQSAKES+QE GQQ+ AK QGAAD VKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 INK 65
          +NK
Sbjct: 63 VNK 65

BLAST of Bhi06G000049 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 1  MDNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKD 60
          MDNSQKM YHAGEAKGQTQEKVSNMMDKA++AAQS KES+QEAGQQ+ AK QGA D VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AINK 65
          A+NK
Sbjct: 61 AVNK 64

BLAST of Bhi06G000049 vs. ExPASy TrEMBL
Match: A0A1S3CA67 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 1  MDNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKD 60
          MDNSQKM YHAGEAKGQTQEKVSNMMDKA++AAQS KES+QEAGQQ+ AK QGA D VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AINK 65
          A+NK
Sbjct: 61 AVNK 64

BLAST of Bhi06G000049 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 2  DNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKDA 61
          DNSQKM YHAGEAKGQ QEK SNMMDKA+DAAQSAKES+QEAGQQVKAK QGAAD VKDA
Sbjct: 3  DNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVKDA 62

BLAST of Bhi06G000049 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 53/60 (88.33%), Postives = 54/60 (90.00%), Query Frame = 0

Query: 2  DNSQKMKYHAGEAKGQTQEKVSNMMDKAADAAQSAKESMQEAGQQVKAKVQGAADVVKDA 61
          DNSQKM YHAGEAKGQ QEK SNMMDKA+DAAQSAKESMQEAGQQVKAK QG AD VKDA
Sbjct: 3  DNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVKDA 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G53820.13.9e-1464.41Late embryogenesis abundant protein (LEA) family protein [more]
AT3G02480.11.5e-1365.00Late embryogenesis abundant protein (LEA) family protein [more]
AT5G38760.11.5e-1366.10Late embryogenesis abundant protein (LEA) family protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KXN24.5e-1884.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1[more]
A0A5D3BPC05.9e-1882.81Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CA675.9e-1882.81stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV... [more]
A0A6J1E4Q82.9e-1788.33stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ... [more]
A0A6J1E4S02.9e-1788.33stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableGENE3D6.10.140.1430coord: 4..64
e-value: 5.9E-6
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR34191:SF4LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEINcoord: 1..64
IPR039624Stress-induced protein KIN1/KIN2PANTHERPTHR34191LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEINcoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000049Bhi06M000049mRNA