Bhi05G001610 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001610
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	AAA domain-containing protein
Location	chr5: 58632738 .. 58635964 (+)
RNA-Seq Expression	Bhi05G001610
Synteny	Bhi05G001610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTTCCCTTCAAGTATAGTAACATCACTTGCTTTCTTAAATTCATTACGAGGTCATCATTGTGAGTTAGTGGAAAGGATATTTGAAATTGATCAAGAGTCGTCCACCGGTGATATTGTCAACAAAGTAGTAGTGCCATTGACTATTTTGGAGTTATCTTCTCTCCCCAACTTAAAGCATGTGTGGAATAATGATCCAGCCCACAAACTTCTAACATTTCCAAATCTAAAGAATGTAAAGGTTGAGAAGTGTCCTCAGCTTAAAACTCTATTTCCAGCTTCCTTCATCAATCACATGAAGGAAATTGAAGAATTGGTCTATAATGAAGAAAATGAAATATTTGGAGAGGTTGATGAAGCTTCACAGTTGGTGTCCCCTCAGGTAATTAATGCATCTTATCTTGGTTATTAATACCTTAATTATATATGCAACATTTTACTTTCTATTTCAATTGTAGTTAAGAAATTTTGTTTGTTTTTTAAGTTGCATTATTCCCAAGCTTGAGAAGTTTGACAATACAGTTCTGCAAGGTGGTGAAAAAAAAGAGCTCTTTGGTTAGATCTGTGGAGTACTCATTCCCCAAACTTGAAGAACTTGATTTGATTGGTTCCGATTCCAAAGATGAGGATATGGTTAGTTTTCCATTAGACATGAGCAAATTAGTATGGAGATTAATTACACAATTCAAGTTTGAGATGGTACAAGTATTCCAAAATGGAGAAGATCAAAATAACAAAAATAATCATGCTAGTAGGTGGTGCGAAATTGAAGGCTTTAGGTTTGGATAATCTTCCTAACCTTACACATGTGGGGGAGGACAACACCGAGCAAATGACTTCAAGCTGCCTTGATAATAATTTGGAACATATTTGTGTAAGAAGATGTGAGAATTTGAAGTGTTTACTACGATCATCAATCACATTCATCAACTTGACATCCCTTGCAGTGGAAGATTGCAATGGGATGATGAATTTGTTCAACTCCTCGGTGATAAAAGGTCTAGTGAATCTAAGAAGTATGGACATAAGCAAGTGTAAAGAAATGAAGTATATAGTTGTAGCTCAATAAGGAGGAGAAGCAAATCAGGGGGAAGAAATTGTTTTCAATAAATTGCTTAAATTGAGGTTACATGAACGGCCAAGTCTGACTAGCTTTCACTCTGAAAAATGCATGCTTAAGTTCCCTTGTTTAGAAAGGTTGGACATAAATGGATGTCTTGAAATGAAGACATTTTCATATGGAATAACAAGCATGCCCAAGTTGCCACATGTGGAGATAGAGAAAGGTAAGGTCTCAGTATGGACATCAACATTCGATCTCTTTAATGGAGATACGTGTAATATCATGTGAGATTGTGAGAAGCATCATAAAACCAGTTCACACAACATCAGGTGTATGCATCTTTATTACTTCAACCATTATTTCCATCCAAAATTAACAATAACATACGTTATATTTTACAAACACCATTTTCTTTCTCTAATTCGCTTTAAAATTTTAATTTCATACAAAATCAATTTATACATTACAATAATCTTTCCCATGTTTAATTAGACATTTATTTGTATTCACTTTCAAAATTCTTGAAACCTTTTCTTTTCCGTTTAATGAAAAACAATTTTTAAACATTTAAAAAGTGAATTTAATTAGTCTTAAAATATGAACAAAATTCTTTAATACCTTATTACAAAAATAACATTAAAAAAAGTCTTAAAATGTTCCTATCATTAATATGGCGATTAATTTTTTTGAAGTTTTCTTAAATTCAAAAAATCTAATTTTGAAACAAATTATATAAGATATCCTCATGTTTTTTTTTTCATATAAACACTTTCATTTTTCTCTTAATTTTCCAATTCTTAGCCACTTAAAACATATCAAAACGATAAATAGTCAACAAAATATATATATTTGGCTATTAACACACTCAAATACTAACGTACAATTTTTTTAAAACATTTAAATCCTAAAATTCCTTTGTGCTTCCGTCATTCTCTTTCATCTTGTTGTAGTCCTTATACCTTAATTGAAGAATGCGATTTTATTTATTTACTTATCTTTTATAAACAAATGTTAACAAAAAGGGGAGTAAGAGAGTATTAAAAAAGAGATGGAGAAAAGAGATGGGATATAGAGAATTAGGACGATATTAACAGTTTTGCCTCATATAACCGTAAGGGTATTTTTGAACTTTTTTAAAGTTTAAAGGTAATTTTGAAACTTCGGAAAGTTTAAGAGTATTTTTAATACAAAATACTAATGGTTTCCATCTAAAATTAACCGTATGATATTTTTTAACTTCTTTTGAAAGTTTAAGAATATTTTTAAAACTTTTGAAAGTTGAAAGATATTTTTTATATAAAGAACAAAGTTTAAGGGCATCTGGTATAATTTAACCTTTTATTATTATTTCTAACTATGTTTTTATTCCTTTTTGTGTGCGGGTTACATAGAATGGAAAGGAATATGTTGTGGATTCTATCTCACTTTTTTAAAAATAGAGTACTAGATAAAAGAGATCAGAGGGTGTATCGACACATCTCAACTAGATTGACACCTCTTTAGCATCGTGATCATACCTGAATTGAGAAGAGATGCATTCCATGAAAGAAAATGATTCATATACAAAGAGAGCTGGAGAATAGTTCGCAACAAAAAAGAAACAAAAAAGGCTAGAGGAAAGGCTTCTAATCAAGAGGAAAAGTGTATTTAGACAAAAAGTCCCAATTTCCCAATCTGTAAAATGGATCTAAAAATGTAATTTGGGAACGATCAGAATTCAGCCAAGACTATCAAAATTCTATACTTTAGAGCAATAATGATATTATTGACACAGCAACTGCCTCATCTTCATTCTACAGTCGCCAAGCGGGAAGAATTCTTCAACTAATTTGATTCAAAATTATGCCTCATTCCCCATCTTTGGAGTTTCAAATTCAATTTTAAAGCTTCGTTGAAGTGCTTTTGCAGCAAGAACGGAACTACCCCACGAAGCTTTTTAGATGAGTTCCAAAAATTTCTTATGTTTCTTCTTTTGGGTATCTCTCAAATTCAAGAATTTCTTATTGATATGTTCAATTTTGTTGTTTGAACTTATGGTGATGCAGTATTTTGATTTTAGGGTTTTTCTGCTCTGCCACGGGATGTCCCTGGGGATAATCATACTGCTTGGAGCACAATGGCTCTTTACATTTTCAGTCTGCATATTCCTTTGAGTCTTGGAA

mRNA sequence

ATGTGTTTCCCTTCAAGTATAGTAACATCACTTGCTTTCTTAAATTCATTACGAGGTCATCATTGTGAGTTAGTGGAAAGGATATTTGAAATTGATCAAGAGTCGTCCACCGGTGATATTGTCAACAAAGTAGTAGTGCCATTGACTATTTTGGAGTTATCTTCTCTCCCCAACTTAAAGCATGTGTGGAATAATGATCCAGCCCACAAACTTCTAACATTTCCAAATCTAAAGAATGTAAAGGTTGAGAAGTGTCCTCAGCTTAAAACTCTATTTCCAGCTTCCTTCATCAATCACATGAAGGAAATTGAAGAATTGGTCTATAATGAAGAAAATGAAATATTTGGAGAGGTTGATGAAGCTTCACAGTTGGTGTCCCCTCAGTTCTGCAAGGTGGTGAAAAAAAAGAGCTCTTTGGTTAGATCTGTGGAGTACTCATTCCCCAAACTTGAAGAACTTGATTTGATTGGTTCCGATTCCAAAGATGAGGATATGGGTTTTTCTGCTCTGCCACGGGATGTCCCTGGGGATAATCATACTGCTTGGAGCACAATGGCTCTTTACATTTTCAGTCTGCATATTCCTTTGAGTCTTGGAA

Coding sequence (CDS)

ATGTGTTTCCCTTCAAGTATAGTAACATCACTTGCTTTCTTAAATTCATTACGAGGTCATCATTGTGAGTTAGTGGAAAGGATATTTGAAATTGATCAAGAGTCGTCCACCGGTGATATTGTCAACAAAGTAGTAGTGCCATTGACTATTTTGGAGTTATCTTCTCTCCCCAACTTAAAGCATGTGTGGAATAATGATCCAGCCCACAAACTTCTAACATTTCCAAATCTAAAGAATGTAAAGGTTGAGAAGTGTCCTCAGCTTAAAACTCTATTTCCAGCTTCCTTCATCAATCACATGAAGGAAATTGAAGAATTGGTCTATAATGAAGAAAATGAAATATTTGGAGAGGTTGATGAAGCTTCACAGTTGGTGTCCCCTCAGTTCTGCAAGGTGGTGAAAAAAAAGAGCTCTTTGGTTAGATCTGTGGAGTACTCATTCCCCAAACTTGAAGAACTTGATTTGATTGGTTCCGATTCCAAAGATGAGGATATGGGTTTTTCTGCTCTGCCACGGGATGTCCCTGGGGATAATCATACTGCTTGGAGCACAATGGCTCTTTACATTTTCAGTCTGCATATTCCTTTGAGTCTTGGAA

Protein sequence

MCFPSSIVTSLAFLNSLRGHHCELVERIFEIDQESSTGDIVNKVVVPLTILELSSLPNLKHVWNNDPAHKLLTFPNLKNVKVEKCPQLKTLFPASFINHMKEIEELVYNEENEIFGEVDEASQLVSPQFCKVVKKKSSLVRSVEYSFPKLEELDLIGSDSKDEDMGFSALPRDVPGDNHTAWSTMALYIFSLHIPLSLG

Homology

[Close]

BLAST of Bhi05G001610 vs. TAIR 10
Match: AT2G20725.1 (CAAX amino terminal protease family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 29/85 (34.12%), Postives = 42/85 (49.41%), Query Frame = 0


Query: 115 FGEVDEASQLVSPQFCKVVKKKSSLVRSVEYSFPKLEELDLIGSDSKDEDMGFSALPRDV 174
           F  +  AS       C  +K KSS          +  +++ +G+       GFS L  ++
Sbjct: 28  FRRLSSASTCRPSLICSCLKSKSS---------QETTQIEQLGNGE-----GFSVLASEI 87

Query: 175 PGDNHTAWSTMALYIFSLHIPLSLG 200
           P ++   WST ALY+FSLHIPLS G
Sbjct: 88  PWEDDNIWSTFALYMFSLHIPLSFG 98

[Close]

BLAST of Bhi05G001610 vs. ExPASy TrEMBL
Match: A0A6J1CPP4 (probable disease resistance protein At4g27220 OS=Momordica charantia OX=3673 GN=LOC111013433 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.5e-31
Identity = 91/168 (54.17%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 3    FPSSIVTSLAFLNSLRGHHCELVERIFEIDQESSTGDIVNKV-VVPLTILELSSLPNLKH 62
            F S++VTSL FLN+L   +CEL+ERIFEI      G +V+   V+PLT L L SLPNLK+
Sbjct: 862  FTSNMVTSLVFLNTLEIDNCELLERIFEI------GKLVDDAKVLPLTDLSLRSLPNLKY 921

Query: 63   VWNNDPAHKLLTFPNLKNVKVEKCPQLKTLFPASFINHMKEIEELVYNEENEIFGEVDEA 122
            VWNNDP  + LTFPNLKNV V  CP+LK LFPASFI H++EIE L   E +EIF E DEA
Sbjct: 922  VWNNDPG-EFLTFPNLKNVNVSSCPRLKCLFPASFIKHIEEIESLCAYEVDEIFSE-DEA 981

Query: 123  SQLVSP-------QFCKVVKKKSSLVRSVEYSFPKLEELDLIGSDSKD 163
            S+L  P       Q  ++V K+S   RS   SFPKL  L L G +  D
Sbjct: 982  SKLGFPEIVFRSLQILEMVVKRSFWFRS--GSFPKLHNLKLKGGEDDD 1019

[Close]

BLAST of Bhi05G001610 vs. ExPASy TrEMBL
Match: A0A0A0K5R3 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G239020 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-23
Identity = 82/184 (44.57%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 3    FPSSIVTSLAFLNSLRGHHCELVERIFEIDQESSTGDIVNKVVVPLTILELSSLPNLKHV 62
            FPS+I TSL FL++L+ + CEL+E IFEI+++ ++GD     VVPL  L L  L NLK+V
Sbjct: 972  FPSNIATSLVFLDTLKIYGCELLEMIFEIEKQKTSGD---TKVVPLRYLSLGFLKNLKYV 1031

Query: 63   WNNDPAHKLLTFPNLKNVKVEKCPQLKTLFPASFINHMKEIEELVYNE--ENEIFGEVDE 122
            W+ D    ++ FPNLK VKV +CP+LK +FPASF  +MKEIEEL   E    EIF  VDE
Sbjct: 1032 WDKD-VDDVVAFPNLKKVKVGRCPKLKIIFPASFTKYMKEIEELEMVEPFNYEIF-PVDE 1091

Query: 123  ASQLVSPQF----------CKVVKKKSSLVRSVEYSFPKLEELDLIGSDSKDEDMGFSAL 175
            AS+L               CK   K+   V S    F KL+ L+L G     ED    +L
Sbjct: 1092 ASKLKEVALFQSLETLRMSCKQAVKERFWVMS---KFFKLKSLELFGC----EDGKMISL 1143

[Close]

BLAST of Bhi05G001610 vs. ExPASy TrEMBL
Match: A0A0A0LQV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433400 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-23
Identity = 74/169 (43.79%), Postives = 107/169 (63.31%), Query Frame = 0


Query: 3   FPSSIVTSLAFLNSLRGHHCELVERIFEIDQESSTGDIVNKVVVPLTILELSSLPNLKHV 62
           FPS+IVTSL  L++L  + C L+E IFEI++  ++ D   KVVVPL  L L  LP+LK+V
Sbjct: 313 FPSNIVTSLVSLDTLEINCCGLLEMIFEIEKPKTSCD--TKVVVPLRHLYLQVLPSLKYV 372

Query: 63  WNNDPAHKLLTFPNLKNVKVEKCPQLKTLFPASFINHMKEIEELVYNEENEIFGEVDEAS 122
           W+ D    ++ FPNLK V+V +CP+L+++FP SF  +MKEIEEL+  E+  IF   DEAS
Sbjct: 373 WDKD-GDDVVAFPNLKKVEVSRCPKLRSIFPPSFTKYMKEIEELIV-EDEPIFPVEDEAS 432

Query: 123 QLVSPQFCKVVKK-KSSLVRSVE------YSFPKLEELDLIGSDSKDED 165
           +L      + +K  K S   +V+        F KL+ L+L+G +  D+D
Sbjct: 433 KLKEVALFQSLKTLKMSCKEAVDERFWVMSKFFKLKRLELVGCEDDDDD 477

[Close]

BLAST of Bhi05G001610 vs. ExPASy TrEMBL
Match: A0A6J1DLB8 (disease resistance protein RPS5-like OS=Momordica charantia OX=3673 GN=LOC111022189 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 3   FPSSIVTSLAFLNSLRGHHCELVERIFEIDQESSTGDIVNKVVVPLTILELSSLPNLKHV 62
           FPS++VTSL FL  L  + CEL+E IFE+++ +       +  VPLT L L SLP LK+V
Sbjct: 674 FPSNVVTSLVFLKILEIYTCELLEGIFEVEKLTDEA----RATVPLTKLILISLPKLKYV 733

Query: 63  WNNDPAHKLLTFPNLKNVKVEKCPQLKTLFPASFINHMKEIEELVYNEENEIFGEVDEAS 122
           W+ DP  + LTFPNL+ V+V  CP+LK+  P SFI HM E + LV           DEAS
Sbjct: 734 WDKDPG-EFLTFPNLRKVEVSGCPRLKSFVPTSFIRHMDETKTLV----------TDEAS 784

Query: 123 QLVSPQ 129
           +LV P+
Sbjct: 794 KLVVPE 784

[Close]

BLAST of Bhi05G001610 vs. ExPASy TrEMBL
Match: A0A6J1KDH0 (probable disease resistance protein At4g27220 OS=Cucurbita maxima OX=3661 GN=LOC111493908 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.7e-16
Identity = 65/182 (35.71%), Postives = 96/182 (52.75%), Query Frame = 0


Query: 3    FPSSIVTSLAFLNSLRGHHCELVERIFEIDQESSTGDIVNKVVVPLTILELSSLPNLKHV 62
            FPS+ + SL  L  L    CEL+E IF+    +  G+I +     L  L+L  LP LK+V
Sbjct: 984  FPSNTIRSLKSLEKLEIRSCELIEEIFQWSDANEEGEIFSS---QLRHLDLHELPRLKNV 1043

Query: 63   WNNDPAHKLLTFPNLKNVKVEKCPQLKTLFPASFINHMKEIEELVYNE--ENEIFGEVDE 122
            WN  P  +L+TF ++ +V VE CP+LK+LFPASF  +++ +E LV       EIF + +E
Sbjct: 1044 WNRVP-QELVTFQSIASVTVEGCPELKSLFPASFTTNLQLLESLVLERCGLEEIFVK-EE 1103

Query: 123  ASQLVSPQF-----------CKVVKKKSSLVRSVEYSFPKLEELDLIGSDSKDEDMGFSA 172
              +    QF           C +V +     +S+   FPKL+ L L+GSD     +  + 
Sbjct: 1104 RFETTKTQFVFSKVSFLTLDCTLVMRDLWHGQSLRVLFPKLKALALLGSDVYKWSISMTN 1160

The following BLAST results are available for this feature:

BLAST of Bhi05G001610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20725.1	3.2e-06	34.12	CAAX amino terminal protease family protein	[more]

BLAST of Bhi05G001610 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi05G001610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPP4	8.5e-31	54.17	probable disease resistance protein At4g27220 OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0K5R3	3.8e-23	44.57	NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G239020 PE=4...	[more]
A0A0A0LQV7	3.8e-23	43.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433400 PE=4 SV=1	[more]
A0A6J1DLB8	2.0e-19	47.62	disease resistance protein RPS5-like OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KDH0	7.7e-16	35.71	probable disease resistance protein At4g27220 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 3..175 e-value: 1.7E-5 score: 25.3
None	No IPR available	PANTHER	PTHR33463:SF102	RESISTANCE PROTEIN RFL1, PUTATIVE-RELATED	coord: 3..124
None	No IPR available	PANTHER	PTHR33463	FAMILY NOT NAMED	coord: 3..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001610	Bhi05M001610	mRNA