Bhi05G001529 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001529
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ATP synthase subunit e, mitochondrial
Location	chr5: 56497929 .. 56500261 (-)
RNA-Seq Expression	Bhi05G001529
Synteny	Bhi05G001529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAGTGCATTAGAGAGCACTCCGCACGGGATTAAATCCTGGACTGGTCAGTAATGGACTTTAATCTCCAGAGTCGAACCTCCAAATTCCTAGGGCTCCTCTCTTCTCAAAATCGGCTTCTCCTTCTACAAAACTCTTTCTTCTTCTCCATTTTCCTTTGCAAAATCCTTTAATGGCGCTTCCTCCAGGCCCCTATTCTGGAACCAGCACCCTCGCTTTGGTATGTTTTTCTTGTTTTCCCATCGTTTTCCTTCAAAATTTTGGTCTGGAGATTAGGTAGAACATTTCGTGTTGAAATTGCTATTTCTGGATCTGATTTTGGATTCAATAATGGAAATTAATGTTCATATTCAACGGTCTTGATCCTTGCCAGGTTGCTCGTGCGTCGGCGTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGTTCGTTGATTTGGGATTCCGTTGTTAGTGTTTCTAAATTCTCATTCCTGCCAAGCGTGTCGTTGAGCCATCTGCTATATATCGTCGCATTCTAGATATAGGATATATTTTTAGAGCGTATGTAAGTTTTAATCTGATTGTTTTTTAAGGCTAAGTTATTCAAAATGCCCCTGTGCTTTGAGATTAGTTTCGATTTTACTCTTATTGTTGAAGACTCCCTTCTACCCTTAACCTTTAAATTGATTCAAATATGCTCTTTGAGAATTTTATCTTTAAAACGAGTTATGGAAATTGATGGGGCTGCTTAGTTTTAACTTGAAAGTGTACAGTGGCAGACATGGCTTTTCAAAAATGGACTAAATGAAGGGCCAATGTAGTTTGAAAAGGGATGGTCTTGTTCTCGTATCCTTTTTAAATAGACATATCTGCCAGTACTTTATCTACAACTCAACAGCCATGTCAATTTCATCACAATGGTAAAATTGTTCAGGAGCATTTTTTTAATCAATTTTGAAGGTCAAGAATAGAAATAAAGAGTTTGAAACGATAAATGTGTAATTGAAACTAACCTCAAAGCTCATGGATATATATATATATATATATATATATATATATATCTCAATAATTTAGTCTTTTTCTCTATAAGGAAGTAGAGTAGAAAGTGAAGGCGAGAGGTTATCTTACTGAATGATGGGAGTTATAAATTGAACCATCCAGTTAACTTGAATATCGAAAAAGGAATAATTGCATAGCTTCCTAGAAAAGAGTATACCGTCCAGAAACCAAAAGGTAATGCCATCAATCATCTCTGGTAGATTTGACAAGTTTTCTTCAACAATTCTCCGAATTCTTTCCCCCTCCATCAAAAGGAACGCCATCAGCCATCTCTTGTCTTCACTCTTTTTGAAATTTAGTGAAGAAAAAATTTCTGATCTAGAATACTGATTCCTTAGTGATTAAGATTTTTATTGTCGTTACTATTATGTATGATGCAATTGATGTGTTTTCTGATTGCAATATTTGTTTTGTCGTTTATTTTATAACAGATCATCATTAATTTATCATTTTACGATTTACATTTTAAACATTTTTTTTTGAAGCAACTATTTATGTTTTACATCATAGTTGATAAATATATTAAATTGGATTAATTGGTCTAAATGTCTAATGCCAAGAAAGGATTAATTGTTTTTAATGGGCTGTCAATTTCTTTGAACTTGACGGTTCAATTGAGTTGGATTGAAAATGATATTGGAAGTAACTATTTTCAAAGTTAAAACATAGAGTTTGGTTTTTGAACCATGGTAAATATGTTTGGTGGTCTTGGACTTTATTCCCTAATTTCCATTAATATACGAATGAAGACGAATTATTTATTCTCCTATTTCTAATGGCATTCCTGTTCAATTTCAGTTTAACTTATAGGCATTATGATTTTAAAATCTCATGTTATTTCAAGCTGTCTTGTCTTTCGAGGCCATTCTAAATGTACATGTCTGATTTTAGAATTATACTTCAATTCCTATTTTTATCACCGCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATTCCGCTCAGACTAAAAAGTGAGGCACCAGTTGAATTTCAAAGGGAAATAATACATGGTAGTTGGTCACGATCTACTTTTCTTTAATACTTTTTTGTTCCATGTTGCATTGAATGGCTCTATATTTCATTGAAGAGTCATGTAGATGTATCTTACCTCGGTCTTAAGAACTATATTTGAGTTACAATTAGTTTTGATGGATGGATGAGAGGACTAACATATCATTTGATTCCTTTCTTTGATTGAAATGAATAATTTGCTTCTCATCTTTCTTGGTGCAGGTGTTGTGTTAATT

mRNA sequence

CTCAAGTGCATTAGAGAGCACTCCGCACGGGATTAAATCCTGGACTGGTCAGTAATGGACTTTAATCTCCAGAGTCGAACCTCCAAATTCCTAGGGCTCCTCTCTTCTCAAAATCGGCTTCTCCTTCTACAAAACTCTTTCTTCTTCTCCATTTTCCTTTGCAAAATCCTTTAATGGCGCTTCCTCCAGGCCCCTATTCTGGAACCAGCACCCTCGCTTTGGTTGCTCGTGCGTCGGCGTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTGATTCCGCTCAGACTAAAAAGTGAGGCACCAGTTGAATTTCAAAGGGAAATAATACATGGTAGTTGGTCACGATCTACTTTTCTTTAATACTTTTTTGTTCCATGTTGCATTGAATGGCTCTATATTTCATTGAAGAGTCATGTAGATGTATCTTACCTCGGTCTTAAGAACTATATTTGAGTTACAATTAGTTTTGATGGATGGATGAGAGGACTAACATATCATTTGATTCCTTTCTTTGATTGAAATGAATAATTTGCTTCTCATCTTTCTTGGTGCAGGTGTTGTGTTAATT

Coding sequence (CDS)

ATGGCGCTTCCTCCAGGCCCCTATTCTGGAACCAGCACCCTCGCTTTGGTTGCTCGTGCGTCGGCGTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA

Protein sequence

MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH

Homology

[Close]

BLAST of Bhi05G001529 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-13
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K  S  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

[Close]

BLAST of Bhi05G001529 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-13
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK L+ K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

[Close]

BLAST of Bhi05G001529 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-11
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK    K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLK---IKSMSQKKVEATAHH 50

[Close]

BLAST of Bhi05G001529 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-09
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAK 41
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKHK 40

[Close]

BLAST of Bhi05G001529 vs. ExPASy TrEMBL
Match: A0A0A0K2E7 (ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-18
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of Bhi05G001529 vs. ExPASy TrEMBL
Match: A0A6J1GMM8 (ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455357 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.4e-18
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of Bhi05G001529 vs. ExPASy TrEMBL
Match: A0A7J6FXI7 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

[Close]

BLAST of Bhi05G001529 vs. ExPASy TrEMBL
Match: A0A7J6GZJ8 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

[Close]

BLAST of Bhi05G001529 vs. ExPASy TrEMBL
Match: A0A6J1C358 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008022 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFS GLVYGS KLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSFGLVYGSFKLKYLQAKAKSHKKAEAKAHH 53

The following BLAST results are available for this feature:

BLAST of Bhi05G001529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01130.1	1.6e-13	73.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.1	1.6e-13	71.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.2	1.5e-11	69.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01130.2	2.4e-09	75.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi05G001529 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi05G001529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2E7	2.2e-18	100.00	ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920...	[more]
A0A6J1GMM8	6.4e-18	98.11	ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455...	[more]
A0A7J6FXI7	1.9e-17	96.23	ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057...	[more]
A0A7J6GZJ8	1.9e-17	96.23	ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239...	[more]
A0A6J1C358	2.4e-17	96.23	ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008386	ATP synthase, F0 complex, subunit E, mitochondrial	PFAM	PF05680	ATP-synt_E	coord: 12..51 e-value: 3.1E-5 score: 24.2
None	No IPR available	PANTHER	PTHR36028	OSJNBB0050O03.8 PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001529	Bhi05M001529	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity