Bhi05G001524 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001524
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Auxin-induced protein 15A-like
Location	chr5: 56360633 .. 56360935 (+)
RNA-Seq Expression	Bhi05G001524
Synteny	Bhi05G001524

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCGCTTGCCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAGCATCTCCAAAAGCTGTCGATGTTCCAAAAGGCTATTTTACCGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATTCCGCTATCTTATTTGAACCAGCCTTCTTTTCAAGACTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGTAGTGAAGAAATTTTCCTAAATCTCACTCAGAGTTTAAACGACTCATGA

mRNA sequence

ATGGGTTTCCGCTTGCCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAGCATCTCCAAAAGCTGTCGATGTTCCAAAAGGCTATTTTACCGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATTCCGCTATCTTATTTGAACCAGCCTTCTTTTCAAGACTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGTAGTGAAGAAATTTTCCTAAATCTCACTCAGAGTTTAAACGACTCATGA

Coding sequence (CDS)

ATGGGTTTCCGCTTGCCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAGCATCTCCAAAAGCTGTCGATGTTCCAAAAGGCTATTTTACCGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATTCCGCTATCTTATTTGAACCAGCCTTCTTTTCAAGACTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGTAGTGAAGAAATTTTCCTAAATCTCACTCAGAGTTTAAACGACTCATGA

Protein sequence

MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS

Homology

[Close]

BLAST of Bhi05G001524 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-30
Identity = 57/99 (57.58%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 1  MGFRLPRIV-TAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQP 60
          M  R+PR++ ++KQ L+++    + +S  ++DVPKGY  VYVGE+  KRFV+P+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLN 99
          SFQDLL +AEEEFG++HPMGG+TIPCSEEIF++L    N
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Bhi05G001524 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTGAGSAA-------PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEEIFLNLTQSL 98
          +EEEFG++HPMGG+TIPC E+ F+N+T  L
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Bhi05G001524 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.9e-25
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTAAGSAA-------PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEEIFLNLTQSL 98
          +EEEFG+ HPMGG+TIPC E+ F+N+T  L
Sbjct: 67 SEEEFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Bhi05G001524 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 7.7e-25
Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE--EQKKRFVIPLSYLNQ 60
          M  RL R++ +KQS ++ S            VPKG+  VYVGE  E KKRFV+P+SYLN 
Sbjct: 1  MAIRLSRVINSKQSQKQQSR-----------VPKGHVAVYVGEEMESKKRFVVPISYLNH 60

Query: 61 PSFQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQS 97
          PSFQ LLS+AEEEFG+NHP+GG+TIPC EE F+ L  S
Sbjct: 61 PSFQGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNS 87

[Close]

BLAST of Bhi05G001524 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 49/87 (56.32%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS++  + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTTAASAA-------PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEEIFLNLT 95
          +EEEFG++HPMGG+TIPC E+ F+N+T
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of Bhi05G001524 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-28
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLP        ++++S   N AS K+V+VPKGY  VYVG++  +RF+IP+SYLNQPS
Sbjct: 1   MGFRLP-------GIRKTSIAANQASSKSVEVPKGYLVVYVGDKM-RRFLIPVSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLND 100
           FQDLL+QAEEEFGY+HPMGG+TIPC E+ FL +T  LND
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLND 91

[Close]

BLAST of Bhi05G001524 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-28
Identity = 62/98 (63.27%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
          MGFRLP        ++++S + N AS KAVDV KGY  VYVGE+  +RFVIP+SYLN+PS
Sbjct: 1  MGFRLP-------GIRKASFSANQASSKAVDVEKGYLAVYVGEKM-RRFVIPVSYLNKPS 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLN 99
          FQDLLSQAEEEFGY+HP GG+TIPCSE++F ++T  LN
Sbjct: 61 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Bhi05G001524 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-27
Identity = 60/98 (61.22%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
          MGFRLP        ++++ S  N AS K +D PKGY  VYVGE   KRFVIP+S+LNQP 
Sbjct: 1  MGFRLP-------GIRKTLSARNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQPL 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLN 99
          FQDLLSQAEEEFGY+HPMGG+TIPCSE++F ++T  L+
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of Bhi05G001524 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-27
Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFR+  IV      +R+S     A+ K VDVPKGY  VYVG++  +RF IP+SYLN+PS
Sbjct: 1   MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGDKM-RRFTIPVSYLNEPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLND 100
           FQ+LLSQAEEEFGY+HPMGG+TIPC EE FLN+T  LN+
Sbjct: 61  FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNE 92

[Close]

BLAST of Bhi05G001524 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 62/98 (63.27%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I  A                KA D PKGY  VYVG E+ KRFVIP+SYLNQPS
Sbjct: 1  MGFRLPGIRKAS---------------KAADAPKGYLAVYVG-EKLKRFVIPVSYLNQPS 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLN 99
          FQDLLSQAEEEFGY+HPMGG+TIPCSE++F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Bhi05G001524 vs. ExPASy TrEMBL
Match: A0A5A7U344 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001230 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGN  SPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNRESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLND 100
           FQDLLSQA+EEFGYNHPMGGITIPCSEEIF NLTQSLND
Sbjct: 61  FQDLLSQAKEEFGYNHPMGGITIPCSEEIFQNLTQSLND 99

[Close]

BLAST of Bhi05G001524 vs. ExPASy TrEMBL
Match: A0A0A0K4J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.6e-46
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYF VY+GEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS 101
           FQDLLSQAEEEFGYNHPMGGITIPC+E  FL+LT+SLNDS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of Bhi05G001524 vs. ExPASy TrEMBL
Match: A0A0A0K5T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009020 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGNGASPK VDVPKGYFTVYVGEE KKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKVVDVPKGYFTVYVGEEHKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS 101
           FQDLLSQAEEEFGYNHPMGGITIPC E+ FL+LTQSLN+S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCHEDEFLDLTQSLNES 100

[Close]

BLAST of Bhi05G001524 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSE+ FL+LT+SLNDS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLNDS 100

[Close]

BLAST of Bhi05G001524 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSE+ FL+LT+SLNDS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLNDS 100

The following BLAST results are available for this feature:

BLAST of Bhi05G001524 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	3.6e-30	57.58	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.0e-25	56.67	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	5.9e-25	56.67	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	7.7e-25	56.12	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.3e-24	56.32	SAUR-like auxin-responsive protein family	[more]

BLAST of Bhi05G001524 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	1.1e-28	61.62	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	2.5e-28	63.27	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	2.8e-27	61.22	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33079	6.1e-27	61.62	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	1.8e-26	63.27	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Bhi05G001524 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U344	2.1e-46	95.96	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K4J0	3.6e-46	93.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1	[more]
A0A0A0K5T8	1.0e-45	93.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009020 PE=3 SV=1	[more]
A0A6J1GJW5	1.0e-45	93.00	auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=...	[more]
A0A6J1GL91	1.0e-45	93.00	auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..96 e-value: 4.2E-25 score: 87.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 11..96
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 11..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001524	Bhi05M001524	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin