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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGATAATGCAAAATGAACCAGATATGGTTAACTCATTAATATACACTGTAATGAAACATTTTGTAGGACGAACAGTCATCTACAATAATCAAGCTACTGAAGCACTTCTCAAGATGCGCTGCAGGAAGATGATTGATTTCAAATGGTACAAAGACGTTTTTATGGCACGTATTTACAACCTTACATCTTGTGGAGACGAAATCTGGAAACGAAAATTTGTAAAAGGATTACCTCCTTATATTGTTGAAAATTTTTATCAAAAGATGTCTAAAATCTTCAAAGGAAATCAAATCAACTGGAATTCTCTCACTTACGGAGACATTACCAGTAACATTCAAGCATTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATAATCAAAGATGCAAATTATCGAAAGGAACTAGGGACTTTCTGCAAACAATACAATGTTGAACAAGATATACCGCCCTCAAAGAAAAAGAAGAAATCCACAAAGAAACCTTACAGCAAAGGACGAAGAACAAAAAACGAAGAAAAACCCCGAAAGAGGAAATACTATAATAAAAACAAGAAGTATTCCAAAAATAAAGGAACCACTTGTTTTCGATGCAACAAACAGGGACACTATGCTAATAAATGCCCTTTGATAAAGAGGATCAACAGCCTAGAGATTGACAATGACCTAAAACAATCTCTTCTCTTTGCCATCTGGTCTGAAGATGAAATCTCTATTTCAGAAGAATCATCTTCTGAGGGAAGAATCAATGAAGTTATTGGAGATTCCTCCTCTGAAGGGATACTCTTCCGATTCCTCTCAATCTTCAAAAGAAGTTGTCCCTTGCACAGGATGTATCAATGTTCTAACAAAAGACTAGGAACACCTACTTGA mRNA sequence ATGGAGATAATGCAAAATGAACCAGATATGGTTAACTCATTAATATACACTGTAATGAAACATTTTGTAGGACGAACAGTCATCTACAATAATCAAGCTACTGAAGCACTTCTCAAGATGCGCTGCAGGAAGATGATTGATTTCAAATGGTACAAAGACGTTTTTATGGCACGTATTTACAACCTTACATCTTGTGGAGACGAAATCTGGAAACGAAAATTTGTAAAAGGATTACCTCCTTATATTGTTGAAAATTTTTATCAAAAGATGTCTAAAATCTTCAAAGGAAATCAAATCAACTGGAATTCTCTCACTTACGGAGACATTACCAGTAACATTCAAGCATTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATAATCAAAGATGCAAATTATCGAAAGGAACTAGGGACTTTCTGCAAACAATACAATGTTGAACAAGATATACCGCCCTCAAAGAAAAAGAAGAAATCCACAAAGAAACCTTACAGCAAAGGACGAAGAACAAAAAACGAAGAAAAACCCCGAAAGAGGAAATACTATAATAAAAACAAGAAGTATTCCAAAAATAAAGGAACCACTTGTTTTCGATGCAACAAACAGGGACACTATGCTAATAAATGCCCTTTGATAAAGAGGATCAACAGCCTAGAGATTGACAATGACCTAAAACAATCTCTTCTCTTTGCCATCTGGTCTGAAGATGAAATCTCTATTTCAGAAGAATCATCTTCTGAGGGAAGAATCAATGAAGTTATTGGAGATTCCTCCTCTGAAGGGATACTCTTCCGATTCCTCTCAATCTTCAAAAGAAGTTGTCCCTTGCACAGGATGTATCAATGTTCTAACAAAAGACTAGGAACACCTACTTGA Coding sequence (CDS) ATGGAGATAATGCAAAATGAACCAGATATGGTTAACTCATTAATATACACTGTAATGAAACATTTTGTAGGACGAACAGTCATCTACAATAATCAAGCTACTGAAGCACTTCTCAAGATGCGCTGCAGGAAGATGATTGATTTCAAATGGTACAAAGACGTTTTTATGGCACGTATTTACAACCTTACATCTTGTGGAGACGAAATCTGGAAACGAAAATTTGTAAAAGGATTACCTCCTTATATTGTTGAAAATTTTTATCAAAAGATGTCTAAAATCTTCAAAGGAAATCAAATCAACTGGAATTCTCTCACTTACGGAGACATTACCAGTAACATTCAAGCATTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATAATCAAAGATGCAAATTATCGAAAGGAACTAGGGACTTTCTGCAAACAATACAATGTTGAACAAGATATACCGCCCTCAAAGAAAAAGAAGAAATCCACAAAGAAACCTTACAGCAAAGGACGAAGAACAAAAAACGAAGAAAAACCCCGAAAGAGGAAATACTATAATAAAAACAAGAAGTATTCCAAAAATAAAGGAACCACTTGTTTTCGATGCAACAAACAGGGACACTATGCTAATAAATGCCCTTTGATAAAGAGGATCAACAGCCTAGAGATTGACAATGACCTAAAACAATCTCTTCTCTTTGCCATCTGGTCTGAAGATGAAATCTCTATTTCAGAAGAATCATCTTCTGAGGGAAGAATCAATGAAGTTATTGGAGATTCCTCCTCTGAAGGGATACTCTTCCGATTCCTCTCAATCTTCAAAAGAAGTTGTCCCTTGCACAGGATGTATCAATGTTCTAACAAAAGACTAGGAACACCTACTTGA Protein sequence MEIMQNEPDMVNSLIYTVMKHFVGRTVIYNNQATEALLKMRCRKMIDFKWYKDVFMARIYNLTSCGDEIWKRKFVKGLPPYIVENFYQKMSKIFKGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDANYRKELGTFCKQYNVEQDIPPSKKKKKSTKKPYSKGRRTKNEEKPRKRKYYNKNKKYSKNKGTTCFRCNKQGHYANKCPLIKRINSLEIDNDLKQSLLFAIWSEDEISISEESSSEGRINEVIGDSSSEGILFRFLSIFKRSCPLHRMYQCSNKRLGTPT
Homology
BLAST of Bhi05G001422 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 1.6e-70 Identity = 142/269 (52.79%), Postives = 191/269 (71.00%), Query Frame = 0
Query: 3 IMQNEPDMVNSLIYTVMKHFVGRTVIYNNQATEALLKMRCRKMIDFKWYKDVFMARIYNL 62
I EPDMVN L+YT+ KHF+G T I+ N ATEALL ++C KM +KWYKD FMAR+Y L
Sbjct: 618 IQVEEPDMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTL 677
Query: 63 TSCGDEIWKRKFVKGLPPYIVENFYQKMSKIFKGNQINWNSLTYGDITSNIQALCLSLCK 122
T+CG +IWK+KFV+GLP YI + FYQ M++ QI+W +LTYGDI+S +Q +C++LC
Sbjct: 678 TTCGADIWKQKFVEGLPHYISQKFYQTMTENSVNQQIDWANLTYGDISSTVQMICVNLCT 737
Query: 123 DNKHNQRIIKDANYRKELGTFCKQYNVEQDIPPSKKKKKS-TKKPYSKGRRTKNEEKPRK 182
+NKH ++IKD++YRKELGTFCKQY + Q KKKKK + K + + + K++E PR+
Sbjct: 738 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRR 797
Query: 183 RK-YYNK---NKKYSKNKGTTCFRCNKQGHYANKCPLIKRINSLEIDNDLKQSLLFAIWS 242
RK +YNK K+YS T CF+CN++GHYAN+CPL +IN+L ID KQS+L+AI S
Sbjct: 798 RKHHYNKGKGKKRYSSKTNTICFKCNQKGHYANRCPLQDKINALTIDEKTKQSILYAIRS 857
Query: 243 EDEISISEESSSEGRINEVI---GDSSSE 264
+D+ S ESSSE ++ G SS E
Sbjct: 858 DDDTSSQTESSSEEDYINILQEEGSSSEE 886
BLAST of Bhi05G001422 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 6.1e-70 Identity = 141/270 (52.22%), Postives = 191/270 (70.74%), Query Frame = 0
Query: 3 IMQNEPDMVNSLIYTVMKHFVGRTVIYNNQATEALLKMRCRKMIDFKWYKDVFMARIYNL 62
I EPDMVN L+YT+ KHF+G T I+ N ATEALL ++C KM +KWYKD FMAR+Y L
Sbjct: 727 IQVEEPDMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTL 786
Query: 63 TSCGDEIWKRKFVKGLPPYIVENFYQKMSKIFKGNQINWNSLTYGDITSNIQALCLSLCK 122
T+CG +IWK+KFV+GLP YI + FYQ M+ QI+W +LTYGDI+S +Q +C++LC
Sbjct: 787 TTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCT 846
Query: 123 DNKHNQRIIKDANYRKELGTFCKQYNVEQDIPPSKKKKKS--TKKPYSKGRRTKNEEKPR 182
+NKH ++IKD++YRKELGTFCKQY + Q KKKKK + K + + +TK++E P+
Sbjct: 847 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKTKDQESPQ 906
Query: 183 KRK-YYNKNKK---YSKNKGTTCFRCNKQGHYANKCPLIKRINSLEIDNDLKQSLLFAIW 242
+RK +YNK K YS T CF+CN++GHYAN+CPL +IN++ ID + KQSLL+AI
Sbjct: 907 RRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIR 966
Query: 243 SEDEISISEESSSEGRINEVI---GDSSSE 264
S+D+ + ESSSE ++ G SS E
Sbjct: 967 SDDDTTSQTESSSEEDYINILQEEGSSSEE 996
BLAST of Bhi05G001422 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 8.0e-70 Identity = 141/270 (52.22%), Postives = 188/270 (69.63%), Query Frame = 0
Query: 3 IMQNEPDMVNSLIYTVMKHFVGRTVIYNNQATEALLKMRCRKMIDFKWYKDVFMARIYNL 62
I EPDMVN L+YT+ KHF+G T I+ N ATEALL ++C KM +KWYKD FMAR+Y L
Sbjct: 727 IQVEEPDMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTL 786
Query: 63 TSCGDEIWKRKFVKGLPPYIVENFYQKMSKIFKGNQINWNSLTYGDITSNIQALCLSLCK 122
T+CG +IWK+KFV+GLP YI + FYQ M+ QI+W +LTYGDI+S +Q +C++LC
Sbjct: 787 TTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCT 846
Query: 123 DNKHNQRIIKDANYRKELGTFCKQYNVEQDIPPSKKKKK---STKKPYSKGRRTKNEEKP 182
+NKH ++IKD++YRKELGTFCKQY + Q KKKKK S+KK + K + E
Sbjct: 847 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKAKDQESPR 906
Query: 183 RKRKYYNKNKK---YSKNKGTTCFRCNKQGHYANKCPLIKRINSLEIDNDLKQSLLFAIW 242
R+R++YNK K YS T CF+CN++GHYAN+CPL +IN++ ID + KQSLL+AI
Sbjct: 907 RRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIR 966
Query: 243 SEDEISISEESSSEGRINEVI---GDSSSE 264
S+D+ + ESSSE ++ G SS E
Sbjct: 967 SDDDTTSQTESSSEEDYINILQEEGSSSEE 996
BLAST of Bhi05G001422 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67 Identity = 141/270 (52.22%), Postives = 185/270 (68.52%), Query Frame = 0
Query: 3 IMQNEPDMVNSLIYTVMKHFVGRTVIYNNQATEALLKMRCRKMIDFKWYKDVFMARIYNL 62
I EPDMVN L+YT+ KHF+G T I+ N ATEALL ++ KM +KWYKD FMAR+Y L
Sbjct: 726 IQVEEPDMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKYHKMSRYKWYKDTFMARLYTL 785
Query: 63 TSCGDEIWKRKFVKGLPPYIVENFYQKMSKIFKGNQINWNSLTYGDITSNIQALCLSLCK 122
T+CG +IWK+KFV+GLP YI + FYQ M+ QI+W +LTYGDI+S +Q + ++LC
Sbjct: 786 TTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMINVNLCT 845
Query: 123 DNKHNQRIIKDANYRKELGTFCKQYNVEQDIPPSKKKKK---STKKPYSKGRRTKNEEKP 182
+NKH ++IKD++YRKELGTFCKQY + Q KKKKK S+KK + KG+ E
Sbjct: 846 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGKVKDQESPQ 905
Query: 183 RKRKYYNK---NKKYSKNKGTTCFRCNKQGHYANKCPLIKRINSLEIDNDLKQSLLFAIW 242
R+R +Y K KKYS T CF+CN++GHYAN+CPL +IN+L ID + KQSLL+AI
Sbjct: 906 RRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQSLLYAIR 965
Query: 243 SEDEISISEESSSEGRINEVI---GDSSSE 264
+D+ S ESSSE ++ G SS E
Sbjct: 966 MDDDTSSQTESSSEEDYINILQEEGSSSEE 995
BLAST of Bhi05G001422 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67 Identity = 141/270 (52.22%), Postives = 185/270 (68.52%), Query Frame = 0
Query: 3 IMQNEPDMVNSLIYTVMKHFVGRTVIYNNQATEALLKMRCRKMIDFKWYKDVFMARIYNL 62
I EPDMVN L+YT+ KHF+G T I+ N ATEALL ++ KM +KWYKD FMAR+Y L
Sbjct: 726 IQVEEPDMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKYHKMSRYKWYKDTFMARLYTL 785
Query: 63 TSCGDEIWKRKFVKGLPPYIVENFYQKMSKIFKGNQINWNSLTYGDITSNIQALCLSLCK 122
T+CG +IWK+KFV+GLP YI + FYQ M+ QI+W +LTYGDI+S +Q + ++LC
Sbjct: 786 TTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMINVNLCT 845
Query: 123 DNKHNQRIIKDANYRKELGTFCKQYNVEQDIPPSKKKKK---STKKPYSKGRRTKNEEKP 182
+NKH ++IKD++YRKELGTFCKQY + Q KKKKK S+KK + KG+ E
Sbjct: 846 ENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGKVKDQESPQ 905
Query: 183 RKRKYYNK---NKKYSKNKGTTCFRCNKQGHYANKCPLIKRINSLEIDNDLKQSLLFAIW 242
R+R +Y K KKYS T CF+CN++GHYAN+CPL +IN+L ID + KQSLL+AI
Sbjct: 906 RRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQSLLYAIR 965
Query: 243 SEDEISISEESSSEGRINEVI---GDSSSE 264
+D+ S ESSSE ++ G SS E
Sbjct: 966 MDDDTSSQTESSSEEDYINILQEEGSSSEE 995
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7URX9 | 1.6e-70 | 52.79 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21... | [more] |
| A0A5D3BEY3 | 6.1e-70 | 52.22 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... | [more] |
| A0A5A7UR29 | 8.0e-70 | 52.22 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48... | [more] |
| A0A5D3BG41 | 2.9e-67 | 52.22 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56... | [more] |
| A0A5A7UF59 | 2.9e-67 | 52.22 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57... | [more] |
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001878 | Zinc finger, CCHC-type | SMART | SM00343 | c2hcfinal6 | coord: 198..214
e-value: 0.003
score: 26.8 |
| IPR001878 | Zinc finger, CCHC-type | PROSITE | PS50158 | ZF_CCHC | coord: 199..213
score: 10.147202 |
| None | No IPR available | GENE3D | 4.10.60.10 | | coord: 190..237
e-value: 9.4E-7
score: 31.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 153..187 |
| None | No IPR available | PANTHER | PTHR33054 | FAMILY NOT NAMED | coord: 8..261 |
| IPR036875 | Zinc finger, CCHC-type superfamily | SUPERFAMILY | 57756 | Retrovirus zinc finger-like domains | coord: 182..217 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
|
