Bhi05G001266 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001266
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Protochlorophyllide reductase
Location	chr5: 50435011 .. 50435953 (-)
RNA-Seq Expression	Bhi05G001266
Synteny	Bhi05G001266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAACTTTCAAAGGTCCTTAAAAAGGTGTCCATAAACCTTCATGATAAACACCCACCAACTACACTATCTTCAAAATCTCTTAATTATTAAACTTTCTTCTCCAAAATTCATCCTTTTTTTTTTATATCACAAATCTCAAGAAGAATAATAATCCGATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGCCGGTGGAGGCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGACCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTATAGTCTTCTTCGAACCCCATTTTCGATTTTGTCTTGCTTTTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAAATTAATGGATTTATTCTGTAGTAATTTCGATTTGGATCTGGTTTTCAAAGACACAAATCGAATGCTATAGAATTATTAATAATTGTTATAGAGCCATTATTAATTGGGTCAATATACTTTGGATTTGAATTTTTCCTTTTTTTTTTCCCCTCTTTTGAGTTAGAATATTGTATAACAAATTGTGGAGGTGGAAAGGTTACTATTGAGTTACGCTCGAATTGACTGTTTGAATTCGACTTGAGTGATCAAATTTATATATATATATATATATGTTCTTGTATAAAATAATGTATTAGTTCACAAATTAATTTGTATCTTTTACTTTTATTTTGAATTAGAAGTACATATCGACTCAAACCATAAACCTAAAGTTCATAGAGTATATTCTTGTGATTGAGAATGTTGTCAACAGTTTGTTTTCTTAATCATATTTTTCCAAAGA

mRNA sequence

AAAAAAAAAACTTTCAAAGGTCCTTAAAAAGGTGTCCATAAACCTTCATGATAAACACCCACCAACTACACTATCTTCAAAATCTCTTAATTATTAAACTTTCTTCTCCAAAATTCATCCTTTTTTTTTTATATCACAAATCTCAAGAAGAATAATAATCCGATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGCCGGTGGAGGCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGACCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTATAGTCTTCTTCGAACCCCATTTTCGATTTTGTCTTGCTTTTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAAATTAATGGATTTATTCTGTAGTAATTTCGATTTGGATCTGGTTTTCAAAGACACAAATCGAATGCTATAGAATTATTAATAATTGTTATAGAGCCATTATTAATTGGGTCAATATACTTTGGATTTGAATTTTTCCTTTTTTTTTTCCCCTCTTTTGAGTTAGAATATTGTATAACAAATTGTGGAGGTGGAAAGGTTACTATTGAGTTACGCTCGAATTGACTGTTTGAATTCGACTTGAGTGATCAAATTTATATATATATATATATATGTTCTTGTATAAAATAATGTATTAGTTCACAAATTAATTTGTATCTTTTACTTTTATTTTGAATTAGAAGTACATATCGACTCAAACCATAAACCTAAAGTTCATAGAGTATATTCTTGTGATTGAGAATGTTGTCAACAGTTTGTTTTCTTAATCATATTTTTCCAAAGA

Coding sequence (CDS)

ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGCCGGTGGAGGCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGACCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTATAGTCTTCTTCGAACCCCATTTTCGATTTTGTCTTGCTTTTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

Protein sequence

MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM

Homology

[Close]

BLAST of Bhi05G001266 vs. TAIR 10
Match: AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23
Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMI 60
           M ++ + +RRNL N+RKSPRVAD++    +  G   G      VV   RR+    GF+ +
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGPG------VVANGRRD----GFNSV 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 113
             ++R PFSI+SCF+ P V+G DG+WVSG++  ISEVNHLMVSDSMRYAILM
Sbjct: 61  --IMRFPFSIISCFAVPRVSGTDGLWVSGDYGSISEVNHLMVSDSMRYAILM 100

[Close]

BLAST of Bhi05G001266 vs. TAIR 10
Match: AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-20
Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMI 60
           M ++ + +RRNL N+RKSPRVADES        G  GGG            G++ G    
Sbjct: 1   MLKMLSILRRNLQNLRKSPRVADESALPSTTVNGDHGGG-----------NGSNGG---- 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 113
             +++ P SI+SCFS P V+  DG+WVSG++ R+SEVNHLMV D MRYA+LM
Sbjct: 61  --IMKFPLSIMSCFSVPRVSRADGVWVSGDYGRVSEVNHLMVCDGMRYALLM 95

[Close]

BLAST of Bhi05G001266 vs. ExPASy TrEMBL
Match: A0A5D3BTM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00140 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAA-VVDGDRREGNSYGFSM 60
           MWRLAAAVRRNLHNIRKSPRVADESMY    GGGVDGGGRVAA VVDGDRREGNSYGFSM
Sbjct: 1   MWRLAAAVRRNLHNIRKSPRVADESMY----GGGVDGGGRVAAVVVDGDRREGNSYGFSM 60

Query: 61  IYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 113
           IYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61  IYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 109

[Close]

BLAST of Bhi05G001266 vs. ExPASy TrEMBL
Match: A0A6J1HZK3 (uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 99/112 (88.39%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMI 60
           MWRLAAAVRRNLHNIRKSPRVADESMY  + GGG DGG   A V+DG+RREGNSYGFSMI
Sbjct: 1   MWRLAAAVRRNLHNIRKSPRVADESMY--SAGGGADGG---ATVIDGNRREGNSYGFSMI 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 113
           Y+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61  YTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 107

[Close]

BLAST of Bhi05G001266 vs. ExPASy TrEMBL
Match: A0A1S3C134 (uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.0e-46
Identity = 99/108 (91.67%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAA-VVDGDRREGNSYGFSM 60
           MWRLAAAVRRNLHNIRKSPRVADESMY    GGGVDGGGRVAA VVDGDRREGNSYGFSM
Sbjct: 41  MWRLAAAVRRNLHNIRKSPRVADESMY----GGGVDGGGRVAAVVVDGDRREGNSYGFSM 100

Query: 61  IYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 108
           IYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 101 IYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 144

[Close]

BLAST of Bhi05G001266 vs. ExPASy TrEMBL
Match: A0A6J1C6U0 (uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007908 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 93/112 (83.04%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMI 60
           MWRLAA +RRNLHNIRKSPRVADESMYGG GG   DGGG VA   + DRR GNSYGFSMI
Sbjct: 1   MWRLAAELRRNLHNIRKSPRVADESMYGGGGG---DGGGIVA---ERDRRGGNSYGFSMI 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 113
           YS+LRTPFS+L CFSQPHVNG DG+WVSGEF RISEVNHLMVSDSMRYAILM
Sbjct: 61  YSVLRTPFSVLCCFSQPHVNGADGLWVSGEFARISEVNHLMVSDSMRYAILM 106

[Close]

BLAST of Bhi05G001266 vs. ExPASy TrEMBL
Match: A0A6J1ER34 (uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC111437033 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40
Identity = 91/112 (81.25%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMI 60
           MWRLAAAVR  LHNIRKSPRVADESM+    GGGVDGGGRV  V  G RRE NS+G S+I
Sbjct: 1   MWRLAAAVRSKLHNIRKSPRVADESMF---SGGGVDGGGRV--VDGGRRRERNSHGVSII 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 113
           Y++LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLMVSDSMRYAILM
Sbjct: 61  YNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMVSDSMRYAILM 107

The following BLAST results are available for this feature:

BLAST of Bhi05G001266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35732.1	1.6e-23	51.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G04795.1	1.7e-20	47.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

BLAST of Bhi05G001266 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi05G001266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTM8	1.9e-51	95.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HZK3	1.2e-47	88.39	uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352...	[more]
A0A1S3C134	4.0e-46	91.67	uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=...	[more]
A0A6J1C6U0	4.2e-43	83.04	uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1ER34	1.5e-40	81.25	uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48165	BNAC03G44900D PROTEIN	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001266	Bhi05M001266	mRNA