Bhi05G001253 (gene) Wax gourd (B227) v1

Overview
NameBhi05G001253
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionglycine-rich protein DC7.1-like
Locationchr5: 50062776 .. 50063255 (+)
RNA-Seq ExpressionBhi05G001253
SyntenyBhi05G001253
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACAAAATACATTGAGGAGGGGAGCAAAATCTTCACATTCCCTCTCCAAATTACCAGTTTTTAAAACAAAAAGTTGAAAAAAAAAATGAATTCCATCTCCAAGGATTTTGCCTTTGTAGGTCTTGTATTGGCCATCATAGTCGTTGTTGTCCTCCCCACAAATGCGGCAGCAAAACACCTTTTACTGGGCGGCCCCGGCAGCTCCGCCGACGCCCCTGGCTGCGGAAACTATGCAAAATGTGGTGGATATGGTAGAGATCGTTGCCCACGCGGTTGCTGCGGTGTCAATCGTGGCGGTCGGTGCAGCAAATGCTGCAGCTATATTGATGAAGTTGCAAATGTAAAACCTTGAGATAATATATGGTTAGGAATAGGAGTTTCGAGGTATGGAATTGTTTGTTTGACTTAAGAAGTTTGCAAACCTCCGATTAAAAGAATCAAATTTTATGATTTATTAACTTTTCACATTGTCTTTTCAC

mRNA sequence

CCACAAAATACATTGAGGAGGGGAGCAAAATCTTCACATTCCCTCTCCAAATTACCAGTTTTTAAAACAAAAAGTTGAAAAAAAAAATGAATTCCATCTCCAAGGATTTTGCCTTTGTAGGTCTTGTATTGGCCATCATAGTCGTTGTTGTCCTCCCCACAAATGCGGCAGCAAAACACCTTTTACTGGGCGGCCCCGGCAGCTCCGCCGACGCCCCTGGCTGCGGAAACTATGCAAAATGTGGTGGATATGGTAGAGATCGTTGCCCACGCGGTTGCTGCGGTGTCAATCGTGGCGGTCGGTGCAGCAAATGCTGCAGCTATATTGATGAAGTTGCAAATGTAAAACCTTGAGATAATATATGGTTAGGAATAGGAGTTTCGAGGTATGGAATTGTTTGTTTGACTTAAGAAGTTTGCAAACCTCCGATTAAAAGAATCAAATTTTATGATTTATTAACTTTTCACATTGTCTTTTCAC

Coding sequence (CDS)

ATGAATTCCATCTCCAAGGATTTTGCCTTTGTAGGTCTTGTATTGGCCATCATAGTCGTTGTTGTCCTCCCCACAAATGCGGCAGCAAAACACCTTTTACTGGGCGGCCCCGGCAGCTCCGCCGACGCCCCTGGCTGCGGAAACTATGCAAAATGTGGTGGATATGGTAGAGATCGTTGCCCACGCGGTTGCTGCGGTGTCAATCGTGGCGGTCGGTGCAGCAAATGCTGCAGCTATATTGATGAAGTTGCAAATGTAAAACCTTGA

Protein sequence

MNSISKDFAFVGLVLAIIVVVVLPTNAAAKHLLLGGPGSSADAPGCGNYAKCGGYGRDRCPRGCCGVNRGGRCSKCCSYIDEVANVKP
Homology
[Close]
BLAST of Bhi05G001253 vs. ExPASy TrEMBL
Match: A0A5D3BTN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00260 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.3e-19
Identity = 55/92 (59.78%), Postives = 65/92 (70.65%), Query Frame = 0 

Query: 2  NSISKDFAFV-GLVLAIIVVVVLPTNAAAKHLLLGGPGSSADAPGCGNYAKCGGYGR--- 61
          +S S+ F FV  LV +IIVV+VL +  A + LL  G GSSAD PGCGNY +CGGYGR   
Sbjct: 3  HSNSRHFPFVTTLVFSIIVVLVLSSKVATRDLLHDGHGSSADTPGCGNYNRCGGYGRGGG 62

Query: 62 -DRCPRGCCGVNRGGRCSKCCSYIDEVANVKP 89
           D C  GCCG NRGGRC +CC+Y +EV NVKP
Sbjct: 63 GDGCSHGCCGFNRGGRCIQCCNYANEVTNVKP 94

[Close]
BLAST of Bhi05G001253 vs. ExPASy TrEMBL
Match: A0A0A0K6K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037550 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 3  SISKDFAFV-GLVLAIIVVVVLPTNAAAKHLLLGGPGSSADAPGCGNYAKCGGYGR---- 62
          S SK F FV  LV +I+VV+VL    AA+ LL  G GSSAD PGCGNY +CGGYGR    
Sbjct: 4  SNSKHFPFVTTLVFSIVVVLVLSPKVAARDLLSDGRGSSADTPGCGNYYRCGGYGRGGGG 63

Query: 63 DRCPRGCCGVNRGGRCSKCCSYIDEVANVKP 89
          + C  GCCG NR GRC +CC+Y +EV NV P
Sbjct: 64 NGCSHGCCGFNRDGRCIQCCNYANEVTNVNP 94

[Close]
BLAST of Bhi05G001253 vs. ExPASy TrEMBL
Match: A0A6J1ERA6 (glycine-rich protein DC7.1-like OS=Cucurbita moschata OX=3662 GN=LOC111437089 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 45/88 (51.14%), Postives = 53/88 (60.23%), Query Frame = 0 

Query: 6  KDFAFVGLVLAIIVVVVLPTNAAAKHLL-----LGGPGSSA---DAPGCGNYA-KCGGYG 65
          K FAF+GLVL +IVV +  +  AA+ LL      GG GS +   D PGCGNY   C G+G
Sbjct: 7  KAFAFLGLVLGVIVVDI-SSEVAARDLLQTKYSRGGNGSGSGVDDNPGCGNYIDSCRGHG 66

Query: 66 R-DRCPRGCCGVNRGGRCSKCCSYIDEV 84
              C  GCCG   GGRCSKCCS + EV
Sbjct: 67 PVGGCQHGCCGTKNGGRCSKCCSNVSEV 93

[Close]
BLAST of Bhi05G001253 vs. ExPASy TrEMBL
Match: A0A6J1JMN0 (glycine-rich protein DC7.1-like OS=Cucurbita maxima OX=3661 GN=LOC111486603 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.4e-08
Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 0 

Query: 6  KDFAFVGLVLAIIVVVVLPTNAAAKHLLL-------GGPGSSA-DAPGCGNY-AKCGGYG 65
          K FAF+GLVL  +VVV + +  AA+ LL         G GS   D PGCGNY   C G+G
Sbjct: 7  KAFAFLGLVLG-VVVVDISSEVAARDLLQTKYSRGDNGSGSGVDDIPGCGNYFDSCRGHG 66

Query: 66 RD-RCPRGCCGVNRGGRCSKCCSYIDE 83
           D  C  GCCG   GGRCSKCCS + E
Sbjct: 67 PDGGCQHGCCGTKNGGRCSKCCSNVSE 92

The following BLAST results are available for this feature:
BLAST of Bhi05G001253 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi05G001253 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi05G001253 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BTN83.3e-1959.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K6K91.4e-1758.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037550 PE=4 SV=1[more]
A0A6J1ERA61.2e-0851.14glycine-rich protein DC7.1-like OS=Cucurbita moschata OX=3662 GN=LOC111437089 PE... [more]
A0A6J1JMN03.4e-0850.57glycine-rich protein DC7.1-like OS=Cucurbita maxima OX=3661 GN=LOC111486603 PE=4... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001253Bhi05M001253mRNA