Bhi05G001228 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001228
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	fasciclin-like arabinogalactan protein 6
Location	chr5: 48858497 .. 48860543 (+)
RNA-Seq Expression	Bhi05G001228
Synteny	Bhi05G001228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGCGTAGACTTTGGGGCATTATTCTACGATTCTATTTTATCTTTTCCGTCAAGCTCTGAGTTGTGGCCATCAAATCCAGCTCATTTCCAACCAATCCCACTTCCATTATCCTTCCTCCTCTATATAAATTCCCACTAATTTCCTCCTCCTCCACTGATCTCCTCCTCCGCCATGGCCTCCGCCGCTCTCCTCCTCCTCCTCCTCCTCCCCTTTGCTCTGTTCTCCGAAACTCTTGCCCAAACTCCGGCCCCCCCTGCCCGATCTCCGCCTGGGCCAATCAACATTACCGGCATTCTTGCCCAGGGCGGCCAATTCAACACCTTCATCCGTTTGCTCAACGAAAGCAGATTAATCATTCAGCTTGATAATCAGCTCAACAATTCTCAAGGAGAAGGATTGACCATTCTTGCTCCCACTGATAATGGCTTCAACGCCCTTAAATCCGGCGCCCTCAATGGCCTCGACGACCAGCAGAAGAGCCAGCTCCTCCTCTACCATGTCTTACCTAAGGTATATCTATAACAAAAACACCACTCATTAACTATTACTTTTTCTTTAAAAAAAAAAAAAATTATAATTTTATTAGATGCAACATGGTTGTACAATAGATGAATGCAGCGAATTTCGCTATATCTAAGTATTTTCTTAAAAAAAAAATACTCGTGTATTTTAGTTCAATAACAATATTAAATATTCTGTATGTGATTAAAGAGAATTGCAACTAGATAGAGGTAATTTGAACTGCATTCGAGTATTATCATTATATATATACCCATTCAATAGTTACTTACCGACTGTTGACGAGATAGAACAAAATGTTCCTTAAATTTCAACAATATTTCTCTACTAATGGGAAGTTTCATAATGTTTACTATTTTTTTTTTTTTTTTTTTTTTTTTTAAATACTCTATTCTAAAAATAAAAAAATAAAAAAAAAATGTAAAGTAGAAATATTATTTCAAAAGTTAGCTTAGAGAATAAAGTCATTTGGATGAAAATTAAAATTTCGAAACGTTTTGTGATAGTGATCTGAAAGGAATATTGAGACCTAAGTATCGCCACATTATTATAAGTCATTGTCACACACTAACTCATTTTAGGTCCCAATAGTTCATCTATCAATATTTTCTAGAGTTTTTATTTTAAATGTAATTTGTGATAGTTTGAAGAAAAGTGGATGATACTATTACAACTTTTAATAGGGAATACAAATATTTTTTAATTGATACTATTTTTTTTTTTTTTAAGATAGGAGCGTAAGAATTGTTTTGTTTTTTTCTCTATGTAAAGTATTATTCCATGTGATTCTTAATTAATTTATTTGAAACATGGACATGAAATGCTTATTTTAATTATTTAGACATTTTTCATGCACTTGAAGATATGGTATTCATGTATAAACTTTGGTTTTTTAATTTGTTGATGGCAGTTCTACACCTTGACGGAGCTGCAGACCGTCAGCAACCCGGTGAGGACTCAGGCCGGAGATTGGGGGTTGAACTTCACCGGCCAAGCGAACTCGAACCAAGTTAATGTTTCCACCGGCATCGTCACGGTGCCGATCAACAACAAGCTTAGAGAGCAATCTCCATTGTCCGTTTTTGTCGTAGAGCAAGTTTTGTCGCCCGAGGAACTTTTTGGCAACCACACCGCCGCACCTCCCCCAAAAGCTTCGGCTCCGGAGGCCGATAAGTCGCCAGTCGACGGGGAAACCCCGCCAAAATCCGACGCCGCAAACCCACCGACGAATGACAAGGGTGCGGCTGTGAGAAACAGCGTTGGATTAGGATTGGTTTTGAGTTTTGGTTTGATTGTTATTAGTGTTCTTTCTTAAGAGTTGAGTTTGAGGATAAGTGTTTGTTCTTTGTGTGTTTTTTCTTGTCATATATGCTTTTATTGTTTTTTTATTGTAATTTTTCTTACCCATTCTCTAAAATTGCATTATTATTTATTTTCATAATTTATATGCATATAAGTTAAAAATAATTCTTCTTCATTTTTCTCATTTATTTTTTTAGCTTGAATAATCTCAACTTGGGACAAC

mRNA sequence

AACAGCGTAGACTTTGGGGCATTATTCTACGATTCTATTTTATCTTTTCCGTCAAGCTCTGAGTTGTGGCCATCAAATCCAGCTCATTTCCAACCAATCCCACTTCCATTATCCTTCCTCCTCTATATAAATTCCCACTAATTTCCTCCTCCTCCACTGATCTCCTCCTCCGCCATGGCCTCCGCCGCTCTCCTCCTCCTCCTCCTCCTCCCCTTTGCTCTGTTCTCCGAAACTCTTGCCCAAACTCCGGCCCCCCCTGCCCGATCTCCGCCTGGGCCAATCAACATTACCGGCATTCTTGCCCAGGGCGGCCAATTCAACACCTTCATCCGTTTGCTCAACGAAAGCAGATTAATCATTCAGCTTGATAATCAGCTCAACAATTCTCAAGGAGAAGGATTGACCATTCTTGCTCCCACTGATAATGGCTTCAACGCCCTTAAATCCGGCGCCCTCAATGGCCTCGACGACCAGCAGAAGAGCCAGCTCCTCCTCTACCATGTCTTACCTAAGTTCTACACCTTGACGGAGCTGCAGACCGTCAGCAACCCGGTGAGGACTCAGGCCGGAGATTGGGGGTTGAACTTCACCGGCCAAGCGAACTCGAACCAAGTTAATGTTTCCACCGGCATCGTCACGGTGCCGATCAACAACAAGCTTAGAGAGCAATCTCCATTGTCCGTTTTTGTCGTAGAGCAAGTTTTGTCGCCCGAGGAACTTTTTGGCAACCACACCGCCGCACCTCCCCCAAAAGCTTCGGCTCCGGAGGCCGATAAGTCGCCAGTCGACGGGGAAACCCCGCCAAAATCCGACGCCGCAAACCCACCGACGAATGACAAGGGTGCGGCTGTGAGAAACAGCGTTGGATTAGGATTGGTTTTGAGTTTTGGTTTGATTGTTATTAGTGTTCTTTCTTAAGAGTTGAGTTTGAGGATAAGTGTTTGTTCTTTGTGTGTTTTTTCTTGTCATATATGCTTTTATTGTTTTTTTATTGTAATTTTTCTTACCCATTCTCTAAAATTGCATTATTATTTATTTTCATAATTTATATGCATATAAGTTAAAAATAATTCTTCTTCATTTTTCTCATTTATTTTTTTAGCTTGAATAATCTCAACTTGGGACAAC

Coding sequence (CDS)

ATGGCCTCCGCCGCTCTCCTCCTCCTCCTCCTCCTCCCCTTTGCTCTGTTCTCCGAAACTCTTGCCCAAACTCCGGCCCCCCCTGCCCGATCTCCGCCTGGGCCAATCAACATTACCGGCATTCTTGCCCAGGGCGGCCAATTCAACACCTTCATCCGTTTGCTCAACGAAAGCAGATTAATCATTCAGCTTGATAATCAGCTCAACAATTCTCAAGGAGAAGGATTGACCATTCTTGCTCCCACTGATAATGGCTTCAACGCCCTTAAATCCGGCGCCCTCAATGGCCTCGACGACCAGCAGAAGAGCCAGCTCCTCCTCTACCATGTCTTACCTAAGTTCTACACCTTGACGGAGCTGCAGACCGTCAGCAACCCGGTGAGGACTCAGGCCGGAGATTGGGGGTTGAACTTCACCGGCCAAGCGAACTCGAACCAAGTTAATGTTTCCACCGGCATCGTCACGGTGCCGATCAACAACAAGCTTAGAGAGCAATCTCCATTGTCCGTTTTTGTCGTAGAGCAAGTTTTGTCGCCCGAGGAACTTTTTGGCAACCACACCGCCGCACCTCCCCCAAAAGCTTCGGCTCCGGAGGCCGATAAGTCGCCAGTCGACGGGGAAACCCCGCCAAAATCCGACGCCGCAAACCCACCGACGAATGACAAGGGTGCGGCTGTGAGAAACAGCGTTGGATTAGGATTGGTTTTGAGTTTTGGTTTGATTGTTATTAGTGTTCTTTCTTAA

Protein sequence

MASAALLLLLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRLIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTELQTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVLSFGLIVISVLS

Homology

[Close]

BLAST of Bhi05G001228 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 192.6 bits (488), Expect = 3.8e-49
Identity = 125/252 (49.60%), Postives = 163/252 (64.68%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRL 60
           MA+  LLLLLL    L +E  AQ  A PA  P GPINIT IL +GGQF T IRLLN +++
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQR-AAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQI 60

Query: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTEL 120
             Q++ Q+N+S  EG+T+LAPTDN F  LK G LN L    + +L+LYHV PKFYTL +L
Sbjct: 61  GNQINIQINSS-SEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDL 120

Query: 121 QTVSNPVRTQA------GDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVE 180
            +VSNPVRTQA      G +GLNFTGQ   NQVNVSTG+V   ++  LR++ PL+V+VV+
Sbjct: 121 LSVSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVYVVD 180

Query: 181 QVLSPEELFGNH---TAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVG 240
            VL PEE+FG       APPPK+ +P+     V  ++     AA P  ++K  +   + G
Sbjct: 181 MVLLPEEMFGERKISPMAPPPKSKSPD-----VSDDSESSKKAAAPSESEKSGSGEMNTG 240

Query: 241 LGLVLSFGLIVI 244
           LGL L  GL+V+
Sbjct: 241 LGLGL--GLVVL 241

[Close]

BLAST of Bhi05G001228 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 121/252 (48.02%), Postives = 162/252 (64.29%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPA-RSPPGPINITGILAQGGQFNTFIRLLNESR 60
           M+S+    ++LL F      +   P  PA  +   PIN+T IL  G QF T I+LLN ++
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQ 60

Query: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTE 120
           +  Q+  QLN+S  +G+TI APTDN FN LK G LN L  QQ+ QL+LYH++PK+Y+L++
Sbjct: 61  VGFQVSVQLNSSD-QGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 120

Query: 121 LQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVE 180
           L   SNPVRTQA     G +GLNFTGQA SNQVNVSTG+V   INN LR+Q PL+V+VV+
Sbjct: 121 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVD 180

Query: 181 QVLSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGL 240
            VL PEELFG  T   P  A AP++  S  D ++P    AA+      G++V+ +  LG+
Sbjct: 181 SVLLPEELFGTKTT--PTGAPAPKSSTSSSDADSP----AADDEHKSAGSSVKRT-SLGI 240

Query: 241 VLSFGLIVISVL 247
           V+SF L   SV+
Sbjct: 241 VVSFALFCCSVI 244

[Close]

BLAST of Bhi05G001228 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 182.2 bits (461), Expect = 5.1e-46
Identity = 119/250 (47.60%), Postives = 159/250 (63.60%), Query Frame = 0


Query: 1   MASAALLL--LLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNES 60
           MA+  L L  LLL+   L +      PA PA  P GPIN+T IL +GGQF TFI LLN +
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNIT 60

Query: 61  RLIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLT 120
           ++  Q++ Q+N+S  EG+T+ APTDN F  LK G LN L    + +L+LYHV PK+Y++ 
Sbjct: 61  QVGSQVNIQVNSS-SEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMD 120

Query: 121 ELQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVV 180
           +L +VSNPVRTQA     G +GLNFTGQ  +NQ+NVSTG V   I+N LR+Q PL+V+VV
Sbjct: 121 DLLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAVYVV 180

Query: 181 EQVLSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLG 240
           + VL P E+FG H  +  P A AP++    V  ++     AA+P  +DK  +    VGLG
Sbjct: 181 DMVLLPGEMFGEHKLS--PIAPAPKSKSGGVTDDSGSTKKAASP--SDKSGSGEKKVGLG 240

Query: 241 LVLSFGLIVI 244
             L  GLIV+
Sbjct: 241 FGL--GLIVL 241

[Close]

BLAST of Bhi05G001228 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 164.9 bits (416), Expect = 8.5e-41
Identity = 101/230 (43.91%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 10  LLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRLIIQLDNQLN 69
           L + F + + T  Q PAP    P GP NIT IL + GQF  FIRLL  ++   Q++ QLN
Sbjct: 12  LFIFFLVIATTYGQAPAP---GPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 70  NSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTELQTVSNPVRT 129
           +S   GLT+ APTDN FN+LKSG LN L DQQK QL+ +HVLP   T+ + QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 130 QAGD-----WGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSPEELFG 189
           QAGD     + LN T  ++ NQVN++TG+V+  + N +     L+V+ V+QVL P  +FG
Sbjct: 132 QAGDGQNGKFPLNIT--SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 191

Query: 190 NHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGL 235
           +  A  P    APE   S   G      D  +  + D   A R   G G+
Sbjct: 192 SSVAPAP----APEKGGSVSKGSASGGDDGGD--STDSSDAERTGFGFGI 230

[Close]

BLAST of Bhi05G001228 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 91/250 (36.40%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 5   ALLLLLLLPFALFSET---LAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRLI 64
           +L++LL     L + T   L+Q     A +PPGP N+T IL + GQF  FIRLL  + + 
Sbjct: 4   SLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVA 63

Query: 65  IQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTELQ 124
            QL  QLNNS   G+TI AP+D+ F  LK+G LN L D+Q+ +L+ +HV+P + + +  Q
Sbjct: 64  NQLYGQLNNSD-NGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQ 123

Query: 125 TVSNPVRTQAGD-----WGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQV 184
           T+SNP+RTQAGD     + LN T   + N VN+++G+    ++  +     L+V+ V++V
Sbjct: 124 TISNPLRTQAGDSADGHFPLNVT--TSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKV 183

Query: 185 LSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVL 244
           L P+++F     AP P  S  ++ K   D ++      A     D   A+RN   +   +
Sbjct: 184 LLPQQVFDPRPPAPAPAPSVSKSKKKKDDSDSSSDDSPA-----DASFALRNVGSVCDAV 243

Query: 245 SFGLIVISVL 247
           SF   V+SV+
Sbjct: 244 SF--CVMSVM 243

[Close]

BLAST of Bhi05G001228 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.3e-48
Identity = 125/252 (49.60%), Postives = 163/252 (64.68%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRL 60
           MA+  LLLLLL    L +E  AQ  A PA  P GPINIT IL +GGQF T IRLLN +++
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQR-AAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQI 60

Query: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTEL 120
             Q++ Q+N+S  EG+T+LAPTDN F  LK G LN L    + +L+LYHV PKFYTL +L
Sbjct: 61  GNQINIQINSS-SEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDL 120

Query: 121 QTVSNPVRTQA------GDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVE 180
            +VSNPVRTQA      G +GLNFTGQ   NQVNVSTG+V   ++  LR++ PL+V+VV+
Sbjct: 121 LSVSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVYVVD 180

Query: 181 QVLSPEELFGNH---TAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVG 240
            VL PEE+FG       APPPK+ +P+     V  ++     AA P  ++K  +   + G
Sbjct: 181 MVLLPEEMFGERKISPMAPPPKSKSPD-----VSDDSESSKKAAAPSESEKSGSGEMNTG 240

Query: 241 LGLVLSFGLIVI 244
           LGL L  GL+V+
Sbjct: 241 LGLGL--GLVVL 241

[Close]

BLAST of Bhi05G001228 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-47
Identity = 121/252 (48.02%), Postives = 162/252 (64.29%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPA-RSPPGPINITGILAQGGQFNTFIRLLNESR 60
           M+S+    ++LL F      +   P  PA  +   PIN+T IL  G QF T I+LLN ++
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQ 60

Query: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTE 120
           +  Q+  QLN+S  +G+TI APTDN FN LK G LN L  QQ+ QL+LYH++PK+Y+L++
Sbjct: 61  VGFQVSVQLNSSD-QGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 120

Query: 121 LQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVE 180
           L   SNPVRTQA     G +GLNFTGQA SNQVNVSTG+V   INN LR+Q PL+V+VV+
Sbjct: 121 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVD 180

Query: 181 QVLSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGL 240
            VL PEELFG  T   P  A AP++  S  D ++P    AA+      G++V+ +  LG+
Sbjct: 181 SVLLPEELFGTKTT--PTGAPAPKSSTSSSDADSP----AADDEHKSAGSSVKRT-SLGI 240

Query: 241 VLSFGLIVISVL 247
           V+SF L   SV+
Sbjct: 241 VVSFALFCCSVI 244

[Close]

BLAST of Bhi05G001228 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.2e-45
Identity = 119/250 (47.60%), Postives = 159/250 (63.60%), Query Frame = 0


Query: 1   MASAALLL--LLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNES 60
           MA+  L L  LLL+   L +      PA PA  P GPIN+T IL +GGQF TFI LLN +
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNIT 60

Query: 61  RLIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLT 120
           ++  Q++ Q+N+S  EG+T+ APTDN F  LK G LN L    + +L+LYHV PK+Y++ 
Sbjct: 61  QVGSQVNIQVNSS-SEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMD 120

Query: 121 ELQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVV 180
           +L +VSNPVRTQA     G +GLNFTGQ  +NQ+NVSTG V   I+N LR+Q PL+V+VV
Sbjct: 121 DLLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAVYVV 180

Query: 181 EQVLSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLG 240
           + VL P E+FG H  +  P A AP++    V  ++     AA+P  +DK  +    VGLG
Sbjct: 181 DMVLLPGEMFGEHKLS--PIAPAPKSKSGGVTDDSGSTKKAASP--SDKSGSGEKKVGLG 240

Query: 241 LVLSFGLIVI 244
             L  GLIV+
Sbjct: 241 FGL--GLIVL 241

[Close]

BLAST of Bhi05G001228 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39
Identity = 101/230 (43.91%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 10  LLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRLIIQLDNQLN 69
           L + F + + T  Q PAP    P GP NIT IL + GQF  FIRLL  ++   Q++ QLN
Sbjct: 12  LFIFFLVIATTYGQAPAP---GPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 70  NSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTELQTVSNPVRT 129
           +S   GLT+ APTDN FN+LKSG LN L DQQK QL+ +HVLP   T+ + QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 130 QAGD-----WGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSPEELFG 189
           QAGD     + LN T  ++ NQVN++TG+V+  + N +     L+V+ V+QVL P  +FG
Sbjct: 132 QAGDGQNGKFPLNIT--SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 191

Query: 190 NHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGL 235
           +  A  P    APE   S   G      D  +  + D   A R   G G+
Sbjct: 192 SSVAPAP----APEKGGSVSKGSASGGDDGGD--STDSSDAERTGFGFGI 230

[Close]

BLAST of Bhi05G001228 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 91/250 (36.40%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 5   ALLLLLLLPFALFSET---LAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRLI 64
           +L++LL     L + T   L+Q     A +PPGP N+T IL + GQF  FIRLL  + + 
Sbjct: 4   SLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVA 63

Query: 65  IQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTELQ 124
            QL  QLNNS   G+TI AP+D+ F  LK+G LN L D+Q+ +L+ +HV+P + + +  Q
Sbjct: 64  NQLYGQLNNSD-NGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQ 123

Query: 125 TVSNPVRTQAGD-----WGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQV 184
           T+SNP+RTQAGD     + LN T   + N VN+++G+    ++  +     L+V+ V++V
Sbjct: 124 TISNPLRTQAGDSADGHFPLNVT--TSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKV 183

Query: 185 LSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVL 244
           L P+++F     AP P  S  ++ K   D ++      A     D   A+RN   +   +
Sbjct: 184 LLPQQVFDPRPPAPAPAPSVSKSKKKKDDSDSSSDDSPA-----DASFALRNVGSVCDAV 243

Query: 245 SFGLIVISVL 247
           SF   V+SV+
Sbjct: 244 SF--CVMSVM 243

[Close]

BLAST of Bhi05G001228 vs. ExPASy TrEMBL
Match: A0A1S3C1R5 (fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639 PE=3 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.8e-116
Identity = 222/247 (89.88%), Postives = 235/247 (95.14%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRL 60
           MAS ALLLLLLLPFALFS+TLAQTPA PA SPPGPIN+TGIL+QGGQF+TFIRLLN+SRL
Sbjct: 1   MASPALLLLLLLPFALFSQTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSRL 60

Query: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTEL 120
           IIQLDNQLNNSQGEGLTILAPTDNGFNAL+SGALN LDDQQKSQLLLYHVLPKFYTLTEL
Sbjct: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSPE 180
           QT+SNPVRTQAGDWGLNFTGQANSNQVNVSTG+VTVPINNKLREQSPLSVFVV++VL PE
Sbjct: 121 QTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLPE 180

Query: 181 ELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVLSFGL 240
            LFGNHTAAPPPKA AP ADK+PVDGETPPKSDAA PP NDKGAA RN VGLGL+LSFGL
Sbjct: 181 ALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFGL 240

Query: 241 IVISVLS 248
           IVISV+S
Sbjct: 241 IVISVVS 247

[Close]

BLAST of Bhi05G001228 vs. ExPASy TrEMBL
Match: A0A0A0K1Z9 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 209/247 (84.62%), Postives = 224/247 (90.69%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRL 60
           MASAA LLLLLLPFALF +TLAQTPA P  SPPGPIN+TGIL++GGQF+TFIRLLNESRL
Sbjct: 1   MASAA-LLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRL 60

Query: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTEL 120
           I QLDNQLNNSQG GLTILAPTDNGFN+L+ GALN LDDQQKSQLLLYHVLPKFYTL EL
Sbjct: 61  ITQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSPE 180
           QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGI+T PINNKLREQSPLS+FVV+QVL P+
Sbjct: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPD 180

Query: 181 ELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVLSFGL 240
            LFGNHTAA PPKA AP  DK+PVDGETPPKSDAA PP NDK A  +N VGLGL+LSFGL
Sbjct: 181 ALFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGL 240

Query: 241 IVISVLS 248
           IVISV+S
Sbjct: 241 IVISVVS 245

[Close]

BLAST of Bhi05G001228 vs. ExPASy TrEMBL
Match: A0A5A7UY52 (Fasciclin-like arabinogalactan protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00300 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.1e-96
Identity = 183/203 (90.15%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 45  GGQFNTFIRLLNESRLIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQ 104
           GGQF+TFIRLLN+SRLIIQLDNQLNNSQGEGLTILAPTDNGFNAL+SGALN LDDQQKSQ
Sbjct: 7   GGQFSTFIRLLNQSRLIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQ 66

Query: 105 LLLYHVLPKFYTLTELQTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLRE 164
           LLLYHVLPKFYTLTELQT+SNPVRTQAGDWGLNFTGQANSNQVNVSTG+VTVPINNKLRE
Sbjct: 67  LLLYHVLPKFYTLTELQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLRE 126

Query: 165 QSPLSVFVVEQVLSPEELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGA 224
           QSPLSVFVV++VL PE LFGNHTAAPPPKA AP ADK+PVDGETPPKSDAA PP NDKGA
Sbjct: 127 QSPLSVFVVDKVLLPEALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGA 186

Query: 225 AVRNSVGLGLVLSFGLIVISVLS 248
           A RN VGLGL++SFGLIVISV+S
Sbjct: 187 AARNGVGLGLIMSFGLIVISVVS 209

[Close]

BLAST of Bhi05G001228 vs. ExPASy TrEMBL
Match: A0A6J1ES00 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111437189 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92
Identity = 189/248 (76.21%), Postives = 211/248 (85.08%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFS-ETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESR 60
           MAS ALLLLLLLPF LFS  TLAQTPA PA S PGP+NITGIL +GGQF TFIRLLNE++
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTE 120
           +  QLDNQLNN+  +G+TILAPTDN FN+LK GALNGL+DQ+K+QLLLYHVL KFYTLT+
Sbjct: 61  INTQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120

Query: 121 LQTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSP 180
           LQTVSNPVRT AGDWGLNFTGQA  NQVNVSTG+V V +NNKLREQSPLS++ VEQVL P
Sbjct: 121 LQTVSNPVRTLAGDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLP 180

Query: 181 EELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVLSFG 240
           E LFG+H AAPPPKAS P ++KSP DGETPPKSDAA+ P + K AA RN VGLGLVL FG
Sbjct: 181 EALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240

Query: 241 LIVISVLS 248
           LI  SVLS
Sbjct: 241 LIAFSVLS 245

[Close]

BLAST of Bhi05G001228 vs. ExPASy TrEMBL
Match: A0A6J1JED4 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111486132 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 4.2e-88
Identity = 184/248 (74.19%), Postives = 207/248 (83.47%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFS-ETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESR 60
           MAS A  LLLLLPF LFS  TLAQTPA PA S PGP+NITGIL +GGQF T IRLLNE++
Sbjct: 1   MASTA--LLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTLIRLLNETK 60

Query: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTE 120
           +  QLDNQLNN+  +G+TILAPTDN FN+LK GALNGL+DQ+K+QLLLYHVL KFYTLT+
Sbjct: 61  INTQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120

Query: 121 LQTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSP 180
           LQTVSNPVRT AGDWGLNFTGQA  NQVNVSTG+V V +NNK+REQSPLS++ VEQVL P
Sbjct: 121 LQTVSNPVRTLAGDWGLNFTGQA--NQVNVSTGVVMVAVNNKVREQSPLSIYAVEQVLLP 180

Query: 181 EELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVLSFG 240
           E LFG+H AAPPPKAS P ++KSP DGETPPKSDAA+ P + K AA RN VGL LVL FG
Sbjct: 181 EALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLELVLGFG 240

Query: 241 LIVISVLS 248
           LI  SVLS
Sbjct: 241 LIAFSVLS 243

The following BLAST results are available for this feature:

BLAST of Bhi05G001228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44130.1	3.8e-49	49.60	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT2G20520.1	1.4e-48	48.02	FASCICLIN-like arabinogalactan 6	[more]
AT1G03870.1	5.1e-46	47.60	FASCICLIN-like arabinoogalactan 9	[more]
AT5G03170.1	8.5e-41	43.91	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	1.2e-31	36.40	FASCICLIN-like arabinogalactan-protein 12	[more]

BLAST of Bhi05G001228 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFH6	5.3e-48	49.60	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	2.0e-47	48.02	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q9ZWA8	7.2e-45	47.60	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q8LEJ6	1.2e-39	43.91	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEE9	1.7e-30	36.40	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Bhi05G001228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1R5	4.8e-116	89.88	fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639...	[more]
A0A0A0K1Z9	1.2e-106	84.62	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 S...	[more]
A0A5A7UY52	7.1e-96	90.15	Fasciclin-like arabinogalactan protein 6 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1ES00	3.7e-92	76.21	fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JED4	4.2e-88	74.19	fasciclin-like arabinogalactan protein 13 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 77..180 e-value: 1.0E-19 score: 81.5
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 47..179 e-value: 5.1E-18 score: 65.5
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 35..177 score: 16.878117
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 18..180 e-value: 3.1E-16 score: 61.9
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 32..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..223
None	No IPR available	PANTHER	PTHR32077:SF54	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6	coord: 5..246
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 5..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001228	Bhi05M001228	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane