Bhi05G001143 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001143
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr5: 45797705 .. 45799405 (+)
RNA-Seq Expression	Bhi05G001143
Synteny	Bhi05G001143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAACATGTGTTCTTGTTCAAGAAATTAACAACTCTCCTGTTCTGTTCTTGTTTTGATTTTTCGCGATTATGTCATTTTTTTCAAAGTTCAGTTCTTGTTGGCGGTCGGCGGTGGTGGCGCCGCGCGTCTACCTGGACGGCGCTGTGGCAGAGGAGGTGAAGGAGCAGAGCGTCACGAGACTGAGGAGTTCGAAGTCGGAATCTGCAGCGCATTGGCGGCCGGCGCTAGCTGATATACTGGAGGATAGTAAAGGGGATCGGTCGCCGGTGAAGAAATCCGGCAAAAAGAAGCCGGAGAAGAAAATGTCCGGCCGGCAAGACAGGCTTCTGACCAAGTCGTATAGTTGTCATGGCAGAGATAATTACTGGTAATTAAACTAATTAATTTATTTTCTATACAATTATTGTTTCTAAATTCGGATTTGTTTTTAATGATTTTGAAAGTTTCATCTTCACTCATATTCTGTTTCTAGGTTTTCCTAAAAACAGTGGCTAAAGTAAGCGAGATAATTATCCATAATTATTTTGTAGAATATGTTTAATAATTAATCCTGTTTGGCTTTATTTGTTATTTTCTAAGCGTCATGAAAGTTCATTATTTCAAATAATGGTTGTTTTCTTCAAGAGAAAAGTCACTTTCTAGGCTTTTTTATTCCAAAACCTTTTTTCTTTTTTTCTTTTTTTGGAAGATTTTCAAAACAATTTAATAACATTTTTTTTTCTTATTTTAATTTTAAAAATGGATAACACTGAATATTTAAAAAGTAGAGTGGTTTAGTTTTACCGCGGAAGATCTCGATTTTTATCTAAAATTATGATAAATTTGTTGTAAATTTTGAAAAAGAGACTTACCTGCTAGCTAGCCTGCACTTATTTTTACAACCGTAAATATTTATTTCTTTTTAAGTAAATCTCATTACAAAGTTGAGATGACATTTGTGTTCGATGTCAATATACACATTTGAGACGAAAGAGTTAATAGTTCATAAACAATTATAAAGATGATGCTTATATAGAAATCAATTGCATTGACTATTTTTAAGATTTATTGAAAGTAAACACTAAAACTAGACCATTGTTTTGATATGCTCAACTTTATCGTTAACTCCTAAACTTAAGATTTTGGAAAATTAGTGTTTTAAAATTGGCATCTAAACCATTAAATTTAGTAGACATTTAATTTTAGAATGCGGTACACATTGATAATGCATTAAATTTCTTGGATTAAAAATTTTCTTCTTTGAGCCCATCTTGGTTTTTCTTTGATGATTTGCAGGACGAACTCGGTGGCGATGGCAATGCCGGTGTTTTCGCCCGTGCCAGTCATGTTTTGAAGGTAAATTTTGGTGATCGGAAAATACCATACACAGTTGGTTGTCGGAGGAGAAATTAAAAGGGAATCAAAGCCGTCGCCGAAAGTGGCGTTAAGTTACTCCCACCGTCGTATACGGTTTCAGATTCAGGCTAAAAGCTTGCTAGTGTTTTAGTAACAAATTAATATAAATATCATTTTTCTACTCACCAAAAAAAAAAAAATTATCAATTATGAAGTGGATTTTTGTTTAAGATACTATTGTTTATTTTGATTTTTTAAAAAGAGAAATATTAGTCAGCAAGCCGTGTGGTGTATTATCACGTGGATATTTTGGCATTAATTTGAGTTTTTAATTGGAAAATCCTCCAAATTTATGTTTAAAAA

mRNA sequence

GATGAACATGTGTTCTTGTTCAAGAAATTAACAACTCTCCTGTTCTGTTCTTGTTTTGATTTTTCGCGATTATGTCATTTTTTTCAAAGTTCAGTTCTTGTTGGCGGTCGGCGGTGGTGGCGCCGCGCGTCTACCTGGACGGCGCTGTGGCAGAGGAGGTGAAGGAGCAGAGCGTCACGAGACTGAGGAGTTCGAAGTCGGAATCTGCAGCGCATTGGCGGCCGGCGCTAGCTGATATACTGGAGGATAGTAAAGGGGATCGGTCGCCGGTGAAGAAATCCGGCAAAAAGAAGCCGGAGAAGAAAATGTCCGGCCGGCAAGACAGGCTTCTGACCAAGTCGTATAGTTGTCATGGCAGAGATAATTACTGGACGAACTCGGTGGCGATGGCAATGCCGGTGTTTTCGCCCGTGCCAGTCATGTTTTGAAGGTAAATTTTGGTGATCGGAAAATACCATACACAGTTGGTTGTCGGAGGAGAAATTAAAAGGGAATCAAAGCCGTCGCCGAAAGTGGCGTTAAGTTACTCCCACCGTCGTATACGGTTTCAGATTCAGGCTAAAAGCTTGCTAGTGTTTTAGTAACAAATTAATATAAATATCATTTTTCTACTCACCAAAAAAAAAAAAATTATCAATTATGAAGTGGATTTTTGTTTAAGATACTATTGTTTATTTTGATTTTTTAAAAAGAGAAATATTAGTCAGCAAGCCGTGTGGTGTATTATCACGTGGATATTTTGGCATTAATTTGAGTTTTTAATTGGAAAATCCTCCAAATTTATGTTTAAAAA

Coding sequence (CDS)

ATGTCATTTTTTTCAAAGTTCAGTTCTTGTTGGCGGTCGGCGGTGGTGGCGCCGCGCGTCTACCTGGACGGCGCTGTGGCAGAGGAGGTGAAGGAGCAGAGCGTCACGAGACTGAGGAGTTCGAAGTCGGAATCTGCAGCGCATTGGCGGCCGGCGCTAGCTGATATACTGGAGGATAGTAAAGGGGATCGGTCGCCGGTGAAGAAATCCGGCAAAAAGAAGCCGGAGAAGAAAATGTCCGGCCGGCAAGACAGGCTTCTGACCAAGTCGTATAGTTGTCATGGCAGAGATAATTACTGGACGAACTCGGTGGCGATGGCAATGCCGGTGTTTTCGCCCGTGCCAGTCATGTTTTGA

Protein sequence

MSFFSKFSSCWRSAVVAPRVYLDGAVAEEVKEQSVTRLRSSKSESAAHWRPALADILEDSKGDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCHGRDNYWTNSVAMAMPVFSPVPVMF

Homology

[Close]

BLAST of Bhi05G001143 vs. ExPASy TrEMBL
Match: A0A1S3C217 (uncharacterized protein LOC103495564 OS=Cucumis melo OX=3656 GN=LOC103495564 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36
Identity = 88/120 (73.33%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAVVAPRVYLDGAVAEEVK-EQSVTRLRSSKSESAAHWRPALADILED 60
           MSFFSKFSSCWRSA VAPRVYL  AV+EEVK EQSV R RSSKS+SAAHW+PAL  I+ED
Sbjct: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60

Query: 61  SKGDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCH-GRDNYWTNSVAMAMPVFSPVPVMF 119
            KG +S  KKS +KKPEKK SGRQ R +TKSY  + GRD+YW NS+AMAMP FSPVP MF
Sbjct: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120

[Close]

BLAST of Bhi05G001143 vs. ExPASy TrEMBL
Match: A0A5D3C9U7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003940 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.3e-28
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAVVAPRVYLDGAVAEEVK-EQSVTRLRSSKSESAAHWRPALADILED 60
           MSFFSKFSSCWRSA VAPRVYL  AV+EEVK EQSV R RSSKS+SAAHWRPAL  I+ED
Sbjct: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWRPALDAIVED 60

Query: 61  SKGDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCH-GRDNYW 101
            +G +S  KKS +KKPEKK SGRQ R +TKSY  + GRD+YW
Sbjct: 61  GRGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW 102

[Close]

BLAST of Bhi05G001143 vs. ExPASy TrEMBL
Match: A0A6J1C360 (uncharacterized protein LOC111007936 OS=Momordica charantia OX=3673 GN=LOC111007936 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.0e-24
Identity = 71/127 (55.91%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 1   MSFFSKFSSCWRS-AVVAPRVYLDGAVAEE------VKEQSVTRLRSSKSESAAHWRPAL 60
           M FFS+F SC RS A VAPR+Y D A A+E      V+EQ V R+R SKS  AAHWRPAL
Sbjct: 1   MKFFSRFGSCCRSPATVAPRLYQDTAPADEPITRARVEEQRVGRMRCSKSGPAAHWRPAL 60

Query: 61  ADILEDSK---GDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCHGRDNYWTNSVAMAMPV 118
           + ILED+     ++  V KSG++K EKK SGR+ R + KS S HGRD+YWTNS  +AMP 
Sbjct: 61  SAILEDNNAADAEQFQVNKSGERKLEKKASGRRARAIAKSQSYHGRDDYWTNSTPVAMPT 120

[Close]

BLAST of Bhi05G001143 vs. ExPASy TrEMBL
Match: A0A0A0K279 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044930 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.8e-20
Identity = 65/101 (64.36%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 2   SFFSKFSSCWRSAVVAPRVYLDGAVAEEVK-EQSVTRLRSSKSESAAHWRPALADILEDS 61
           SF SKF SCWRSA VAP      AV +EVK EQ VT  RSSKSESAAHWRPALA I+EDS
Sbjct: 3   SFISKFGSCWRSAAVAPH----DAVTDEVKAEQGVTSPRSSKSESAAHWRPALAAIVEDS 62

Query: 62  KGDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCH-GRDNYW 101
            G     KKS K+K EKK SG Q    TKSY  + GRDNYW
Sbjct: 63  NGAEWRCKKSSKRKAEKKTSGHQGSFTTKSYGYYDGRDNYW 99

[Close]

BLAST of Bhi05G001143 vs. ExPASy TrEMBL
Match: A0A6J1GKL7 (uncharacterized protein LOC111455175 OS=Cucurbita moschata OX=3662 GN=LOC111455175 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.2e-20
Identity = 67/118 (56.78%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAVVAPRVYLDGAVAEEVKEQSVTRLRSSKSESAAHWRPALADILEDS 60
           M  FSK  S  R AV A RVY         +EQS+ R+ SSKSESA+HWRPAL  ILEDS
Sbjct: 1   MPLFSKLGSRLRRAVDARRVY---------QEQSLERVTSSKSESASHWRPALPPILEDS 60

Query: 61  KGDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCHGRDNYWTNSVAMAMPVFSPVPVMF 119
           KG R PVKKSG+K   KK S RQ R +TKSY   GRD YW +S  +A P F+P P MF
Sbjct: 61  KGARLPVKKSGEK---KKTSSRQVRSVTKSY---GRDGYWRSSTMVATPFFAPTPFMF 103

The following BLAST results are available for this feature:

BLAST of Bhi05G001143 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G001143 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G001143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C217	1.8e-36	73.33	uncharacterized protein LOC103495564 OS=Cucumis melo OX=3656 GN=LOC103495564 PE=...	[more]
A0A5D3C9U7	2.3e-28	72.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1C360	2.0e-24	55.91	uncharacterized protein LOC111007936 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K279	1.8e-20	64.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044930 PE=4 SV=1	[more]
A0A6J1GKL7	5.2e-20	56.78	uncharacterized protein LOC111455175 OS=Cucurbita moschata OX=3662 GN=LOC1114551...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..87
None	No IPR available	PANTHER	PTHR35318	BNAA10G08410D PROTEIN	coord: 1..118
None	No IPR available	PANTHER	PTHR35318:SF10	SUBFAMILY NOT NAMED	coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001143	Bhi05M001143	mRNA