Bhi05G001137 (gene) Wax gourd (B227) v1

Overview
NameBhi05G001137
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionActin cytoskeleton-regulatory complex protein
Locationchr5: 45590304 .. 45591449 (-)
RNA-Seq ExpressionBhi05G001137
SyntenyBhi05G001137
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACCATCACAATTCTCAACAAAACAACACACACTTATGACTTAAACTTCCTCTATTTAACACCCCAAGACCAAATCCTCCTCTTCAAAGTTCATCCTCAAATCTCAACCCAACCAAAAAAAATTTCCCTCAAATTGAAAAACCCATATTCGCAAACCTCTTCAAATTAACTAAAACCTTCTTCGTTTCCAATCCATGACCAAATTTTGCCTTCTTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCTTCGATTGCCACAACAACAGAGTCGGCGGCGCCGGAGCCATTGGAGACCGGGACCGGAGAAGGGTATGGAGTGGCTGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCACCACGGCGATAAGTCGGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTATATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTGAGATTGATCCCAATTTTTAGTTTTTTCCTTACAGAAATCTCATGTTTATATAAATATATTCTTTTGATTCTTAAATTGTGTCATAAATTTTTGGTGGAAAATTTGGAGATTGTTGTGTGGTGATGACTGTTGTTTGGTTCTGAAGGTAATAGAGAGAAAAAAGATACCAATTTCCAAATAAATGTTATAAAATCTTTAGTGAGAATATTCTAATTTGTTTTTACTAGAGCCAAGTTTCCATTGGGTGTGAAGCCTAAAAACGCGGAAGATTTTAATACTTGGAAGCTCTTGACTTAGCTTTATTTAATTTAAAAAAGTTGTATTAGGGGTGTACATAGTTCGGATTGAATCGGATTGGAAGATTTTTGTGAACCAACCTAAAAATTCGGATTGGCTAATAATGAAGTTCTTTTTTGGAGGGTCAACCCAATCCAAAATTTTCAGGTTGGGCCGAATTAGGTCACCGGTTCTATTTTTTTATTTTATATATATATATTTTTAATTTGATTTTTTTTTAACTTTTATATATATATATATATATTCGGGTCGGGTCGGGTTAACTCGACCCTGAAATGGGGTAATCCCAAACCCAACTCGAATTTAATATTTTTTAACCTTTTTAACCCAATTCAATCCAAAATAAAATCTAACTCAA

mRNA sequence

CCACCATCACAATTCTCAACAAAACAACACACACTTATGACTTAAACTTCCTCTATTTAACACCCCAAGACCAAATCCTCCTCTTCAAAGTTCATCCTCAAATCTCAACCCAACCAAAAAAAATTTCCCTCAAATTGAAAAACCCATATTCGCAAACCTCTTCAAATTAACTAAAACCTTCTTCGTTTCCAATCCATGACCAAATTTTGCCTTCTTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCTTCGATTGCCACAACAACAGAGTCGGCGGCGCCGGAGCCATTGGAGACCGGGACCGGAGAAGGGTATGGAGTGGCTGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCACCACGGCGATAAGTCGGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTATATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTGAGATTGATCCCAATTTTTAGTTTTTTCCTTACAGAAATCTCATGTTTATATAAATATATTCTTTTGATTCTTAAATTGTGTCATAAATTTTTGGTGGAAAATTTGGAGATTGTTGTGTGGTGATGACTGTTGTTTGGTTCTGAAGGTAATAGAGAGAAAAAAGATACCAATTTCCAAATAAATGTTATAAAATCTTTAGTGAGAATATTCTAATTTGTTTTTACTAGAGCCAAGTTTCCATTGGGTGTGAAGCCTAAAAACGCGGAAGATTTTAATACTTGGAAGCTCTTGACTTAGCTTTATTTAATTTAAAAAAGTTGTATTAGGGGTGTACATAGTTCGGATTGAATCGGATTGGAAGATTTTTGTGAACCAACCTAAAAATTCGGATTGGCTAATAATGAAGTTCTTTTTTGGAGGGTCAACCCAATCCAAAATTTTCAGGTTGGGCCGAATTAGGTCACCGGTTCTATTTTTTTATTTTATATATATATATTTTTAATTTGATTTTTTTTTAACTTTTATATATATATATATATATTCGGGTCGGGTCGGGTTAACTCGACCCTGAAATGGGGTAATCCCAAACCCAACTCGAATTTAATATTTTTTAACCTTTTTAACCCAATTCAATCCAAAATAAAATCTAACTCAA

Coding sequence (CDS)

ATGACCAAATTTTGCCTTCTTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCTTCGATTGCCACAACAACAGAGTCGGCGGCGCCGGAGCCATTGGAGACCGGGACCGGAGAAGGGTATGGAGTGGCTGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCACCACGGCGATAAGTCGGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTATATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTGA

Protein sequence

MTKFCLLCLIVAEILLIQAMASIATTTESAAPEPLETGTGEGYGVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
Homology
BLAST of Bhi05G001137 vs. TAIR 10
Match: AT3G09280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 10 IVAEILLIQAMASIATTTESAAPEPLETGTGEGYG-VAEAPEIRRL------GKHHG--D 69
          IV   LL    +  A ++E+  P   + G  E  G  AEAPE+  L      G HH   +
Sbjct: 6  IVLCFLLTYVFSMAAASSEAEPPATRKLGRHEWPGEEAEAPEVSHLEETVRRGHHHSTVE 65

Query: 70 KSVAGGGVIIGGLVTAIFAAVFCYIRVTRK 91
          +SVAGGGVI+GGL T     VFCYIR TRK
Sbjct: 66 RSVAGGGVILGGLATTFLVVVFCYIRATRK 95

BLAST of Bhi05G001137 vs. ExPASy TrEMBL
Match: A0A5D3C590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003890 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35
Identity = 89/102 (87.25%), Postives = 90/102 (88.24%), Query Frame = 0

Query: 1   MTKFCLL-CLIVAEILLIQAMASIATTTE---SAAPEPLETGTGEGYGVAEAPEIRRLGK 60
           M K CLL CLIVAEILLIQAM SIATTT+   SAAPEP E GT EG  VAEAPEIRRLGK
Sbjct: 1   MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGK 60

Query: 61  HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 99
           HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
Sbjct: 61  HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 102

BLAST of Bhi05G001137 vs. ExPASy TrEMBL
Match: A0A0A0K3N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.2e-31
Identity = 83/103 (80.58%), Postives = 86/103 (83.50%), Query Frame = 0

Query: 1   MTKFCLL-CLIVAEILLIQAM-ASIATTTE---SAAPEPLETGTGEGYGVAEAPEIRRLG 60
           M K CLL CLIV EI LIQA+  SIATTTE   S APE  E GT EG  VAEAPEIRRLG
Sbjct: 1   MAKICLLFCLIVGEIFLIQAITTSIATTTELPLSVAPESSEKGTREGSEVAEAPEIRRLG 60

Query: 61  KHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 99
           KHHGDKS+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSVH
Sbjct: 61  KHHGDKSMAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 103

BLAST of Bhi05G001137 vs. ExPASy TrEMBL
Match: A0A2R6QCD3 (Actin cytoskeleton-regulatory complex protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc19050 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.9e-18
Identity = 62/105 (59.05%), Postives = 73/105 (69.52%), Query Frame = 0

Query: 1   MTKFCLLCLIVAEILLIQAMASIA-----TTTESAAPEPLETGTGE-------GYGVAEA 60
           M++F L CL++A ILL+QAMA  +       + + A  P  TG+ E       G  VAEA
Sbjct: 1   MSRFLLTCLVLAHILLVQAMAIRSDPRKILESHTIADPPASTGSVESASDGETGSSVAEA 60

Query: 61  PEIRRLGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD 93
           PEI RLGKHH  DKSVAGGGVIIGGL TAIFAAV+CYIRVTR+RD
Sbjct: 61  PEIGRLGKHHSSDKSVAGGGVIIGGLATAIFAAVYCYIRVTRRRD 105

BLAST of Bhi05G001137 vs. ExPASy TrEMBL
Match: A0A4S4EVJ7 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_027982 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.8e-17
Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 1   MTKFCLLCLIVAEILLIQAMA------------SIATTTESAAP--------EPLETGTG 60
           M +F L C  +A+ILL+QAMA             +  T++ + P        +P  +   
Sbjct: 1   MGRFVLACFFLAQILLVQAMAIRSDGSELNPPTVVVRTSDKSHPAAFDRAIADPPSSSES 60

Query: 61  EGYGVAEAPEIRRLGKHHG-DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG 94
              G A+APEIRRLGKHH  DKSVAGGGVIIGGLVTAIFAAV+CYIRVTR++DG
Sbjct: 61  ASEGEAQAPEIRRLGKHHSPDKSVAGGGVIIGGLVTAIFAAVYCYIRVTRRKDG 114

BLAST of Bhi05G001137 vs. ExPASy TrEMBL
Match: A0A5B7BMT5 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_039099 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17
Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 0

Query: 1   MTKFCLLCLIVAEILLIQAMASIATTTE-------------------SAAPEPLETG--T 60
           M +F L  LI+AEIL++QAMA+ +  +E                   S A  P+ +G  +
Sbjct: 1   MGRFLLAFLILAEILMVQAMAARSEGSELNPPKVMIRTGDESHGVVGSVADPPVSSGAES 60

Query: 61  GEGYGVAEAPEIRRLGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG 94
               G AE PEIRRLGKHH  DKSVAGGGVIIGGLVTA+FA+V+CYIRVTR+RDG
Sbjct: 61  SSSEGEAEPPEIRRLGKHHSSDKSVAGGGVIIGGLVTAVFASVYCYIRVTRRRDG 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G09280.14.4e-0944.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C5902.1e-3587.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K3N04.2e-3180.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1[more]
A0A2R6QCD36.9e-1859.05Actin cytoskeleton-regulatory complex protein OS=Actinidia chinensis var. chinen... [more]
A0A4S4EVJ75.8e-1751.75Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0279... [more]
A0A5B7BMT57.6e-1753.04Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_039099 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34558:SF4EXPRESSED PROTEINcoord: 1..96
NoneNo IPR availablePANTHERPTHR34558EXPRESSED PROTEINcoord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001137Bhi05M001137mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane