Bhi05G000746 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000746
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionConserved peptide upstream open reading frame 37
Locationchr5: 31724639 .. 31724987 (-)
RNA-Seq ExpressionBhi05G000746
SyntenyBhi05G000746
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCTTCTGTCTCACATCATTTTCATCCTTCAGCATAGTAAAGGGTTAAAAGTAGTTATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCTTTGAAACATGAAAATGGTATTGCAGGGAAGCCAACAATTATTGTTAGAGTGATTGCATGTTTTCAACCTTTGCAGAATTGCCAGGTATACACAGCTTGATTTCTTAACTCTTCGATTTCTCTGTGTTTTATATTCATGGTCAATTAATTTGTCACTGAAGATCATCGACTCCTAGAACTATATGGTTAACGTTGCTGTGGTTTTTTTTCTTCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

mRNA sequence

GCCCTTCTGTCTCACATCATTTTCATCCTTCAGCATAGTAAAGGGTTAAAAGTAGTTATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCTTTGAAACATGAAAATGGTATTGCAGGGAAGCCAACAATTATTGTTAGAGTGATTGCATGTTTTCAACCTTTGCAGAATTGCCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Coding sequence (CDS)

GCCCTTCTGTCTCACATCATTTTCATCCTTCAGCATAGTAAAGGGTTAAAAGTAGTTATGGTGTGCCAAGCAGCGAGTCAAACACGATTTCGGGCTTTGAAACATGAAAATGGTATTGCAGGGAAGCCAACAATTATTGTTAGAGTGATTGCATGTTTTCAACCTTTGCAGAATTGCCAGGCTGAGTACTTCCGTCATTTGCTCAAACCTGTCACGTAG

Protein sequence

ALLSHIIFILQHSKGLKVVMVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT
Homology
BLAST of Bhi05G000746 vs. TAIR 10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37 )

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0

Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQ+A QTRFR LKHE+GI G   I+VRVIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1  MVCQSAGQTRFRTLKHEHGITG--NIVVRVIACFQPLQDCQAEYFRQLLKPVT 51

BLAST of Bhi05G000746 vs. TAIR 10
Match: AT5G09461.1 (conserved peptide upstream open reading frame 43 )

HSP 1 Score: 87.0 bits (214), Expect = 6.6e-18
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0

Query: 20 MVCQAASQTRFRALKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MV Q+A QTRFR  K+E NG + +PTI+VRVIACFQP+ NCQAEYFRH+LKPVT
Sbjct: 1  MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

BLAST of Bhi05G000746 vs. TAIR 10
Match: AT5G64341.1 (conserved peptide upstream open reading frame 40 )

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-16
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ NCQAEYFR LLKPVT
Sbjct: 1  MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

BLAST of Bhi05G000746 vs. ExPASy TrEMBL
Match: A0A5A7PUP4 (Conserved peptide upstream open reading frame 37 (Fragment) OS=Striga asiatica OX=4170 GN=STAS_12744 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.9e-23
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 12  HSKGLKVVMVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPV 71
           HS   KVVMVCQAASQTRFRALKHENGIAG+ TIIVRVIACFQ LQNCQAEYFRHLLKPV
Sbjct: 76  HSNESKVVMVCQAASQTRFRALKHENGIAGRTTIIVRVIACFQSLQNCQAEYFRHLLKPV 135

Query: 72  T 73
           T
Sbjct: 136 T 136

BLAST of Bhi05G000746 vs. ExPASy TrEMBL
Match: A0A7J6F895 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029257 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0

Query: 9  ILQHSKGLKVVMVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLL 68
          +L+   G  VVMVCQAASQTRFRALKH NGIAG+PTIIVRVIACFQPLQ+CQAEYFRHLL
Sbjct: 1  MLKGQNGSSVVMVCQAASQTRFRALKHLNGIAGRPTIIVRVIACFQPLQDCQAEYFRHLL 60

Query: 69 KPVT 73
          KPVT
Sbjct: 61 KPVT 64

BLAST of Bhi05G000746 vs. ExPASy TrEMBL
Match: A0A0A0K458 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

BLAST of Bhi05G000746 vs. ExPASy TrEMBL
Match: A0A1S4E0J3 (uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495379 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

BLAST of Bhi05G000746 vs. ExPASy TrEMBL
Match: W9R7U4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.8e-22
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 20 MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRHLLKPVT 73
          MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G50011.11.0e-1879.25conserved peptide upstream open reading frame 37 [more]
AT5G09461.16.6e-1872.22conserved peptide upstream open reading frame 43 [more]
AT5G64341.11.6e-1667.92conserved peptide upstream open reading frame 40 [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7PUP48.9e-2390.16Conserved peptide upstream open reading frame 37 (Fragment) OS=Striga asiatica O... [more]
A0A7J6F8952.0e-2284.38Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029257 PE=4 SV=1[more]
A0A0A0K4583.4e-2298.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1[more]
A0A1S4E0J33.4e-2298.11uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
W9R7U45.8e-2298.11Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35281BNAA02G34170D PROTEINcoord: 20..72
NoneNo IPR availablePANTHERPTHR35281:SF4SUBFAMILY NOT NAMEDcoord: 20..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000746Bhi05M000746mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane