Bhi05G000383 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000383
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Auxin responsive SAUR protein
Location	chr5: 13559815 .. 13560673 (-)
RNA-Seq Expression	Bhi05G000383
Synteny	Bhi05G000383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCCTAGAAGATTCTTCCTCTATCTCAACGGATCTCTCTCTCTCTCTCTCTCTCTCTTCCACTTCACAACGACCTCTCACCCACATTTAACAATTACCCTCCACCAATCAAAACCCTTTAAATATTACCTTCTCTTTCTCTCTCTAGCCGCTTAAAAGACTCTTTCAAAAAGACCCTTTCAACATCTCTCTCTTCCATCTCTATATAACTACATCTATGAATACTTCTCCTCTATAGTAACCCTAAAAATACTATCTTTACCTCTTCTACAGAAACCCCAAATGGATTGCTTGGTCCTCCCTTGCTACGTCATGAAGAGACGACGACGGAGATCAACCCGACCACGTCTCGGCTACCACCGCCTCAACAAATCCAACGTCGGCCGCCTTGATGGAGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGGAAGGAGAAGAGAGAATTCTTAGTAGACCCTTTTGTGTTAGAAGAAAATCCGTTTCGGATTTTGATCGAAAAGGGAGGAGATGACAATGAAGATGAAGAAGAAGATGGGAAAAGGAAAAGAGTTATATTTGTCGATGTTGATTCTATTTTGTTCGAGCACTTGCTATGGCTCATGTACAACGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTAGACTTTTATGCTCAAGATTTTTAGAGGAAGAGACAGAAAATTCATAACACATAATTAAAGGTATAATATAATTCAGTCATATATACAATAAACATATATATATTATATGTATTTGTACTAATTGTTGAAGTTTATGTAAATGGTGTTCATCTGATGGAATTAACGGAATAAAAGATTAATTATTCAAGAGCACTTTTTAAAAAAAAA

mRNA sequence

ATTTCCTAGAAGATTCTTCCTCTATCTCAACGGATCTCTCTCTCTCTCTCTCTCTCTCTTCCACTTCACAACGACCTCTCACCCACATTTAACAATTACCCTCCACCAATCAAAACCCTTTAAATATTACCTTCTCTTTCTCTCTCTAGCCGCTTAAAAGACTCTTTCAAAAAGACCCTTTCAACATCTCTCTCTTCCATCTCTATATAACTACATCTATGAATACTTCTCCTCTATAGTAACCCTAAAAATACTATCTTTACCTCTTCTACAGAAACCCCAAATGGATTGCTTGGTCCTCCCTTGCTACGTCATGAAGAGACGACGACGGAGATCAACCCGACCACGTCTCGGCTACCACCGCCTCAACAAATCCAACGTCGGCCGCCTTGATGGAGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGGAAGGAGAAGAGAGAATTCTTAGTAGACCCTTTTGTGTTAGAAGAAAATCCGTTTCGGATTTTGATCGAAAAGGGAGGAGATGACAATGAAGATGAAGAAGAAGATGGGAAAAGGAAAAGAGTTATATTTGTCGATGTTGATTCTATTTTGTTCGAGCACTTGCTATGGCTCATGTACAACGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTAGACTTTTATGCTCAAGATTTTTAGAGGAAGAGACAGAAAATTCATAACACATAATTAAAGGTATAATATAATTCAGTCATATATACAATAAACATATATATATTATATGTATTTGTACTAATTGTTGAAGTTTATGTAAATGGTGTTCATCTGATGGAATTAACGGAATAAAAGATTAATTATTCAAGAGCACTTTTTAAAAAAAAA

Coding sequence (CDS)

ATGGATTGCTTGGTCCTCCCTTGCTACGTCATGAAGAGACGACGACGGAGATCAACCCGACCACGTCTCGGCTACCACCGCCTCAACAAATCCAACGTCGGCCGCCTTGATGGAGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGGAAGGAGAAGAGAGAATTCTTAGTAGACCCTTTTGTGTTAGAAGAAAATCCGTTTCGGATTTTGATCGAAAAGGGAGGAGATGACAATGAAGATGAAGAAGAAGATGGGAAAAGGAAAAGAGTTATATTTGTCGATGTTGATTCTATTTTGTTCGAGCACTTGCTATGGCTCATGTACAACGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTAGACTTTTATGCTCAAGATTTTTAG

Protein sequence

MDCLVLPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLDGAESSLVKVVAGKEKREFLVDPFVLEENPFRILIEKGGDDNEDEEEDGKRKRVIFVDVDSILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF

Homology

[Close]

BLAST of Bhi05G000383 vs. TAIR 10
Match: AT2G35290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21
Identity = 61/130 (46.92%), Postives = 83/130 (63.85%), Query Frame = 0


Query: 1   MDCLVLPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLDGAESSLVKVVAGKEKREFLVDPF 60
           M CL+ P  VMK RR  S   R   +R    N+      E  +++VV GKEK+EF+V+P+
Sbjct: 1   MGCLISP--VMKLRRLSSADSRRFAYRNLAENM------EDPVIRVVVGKEKKEFMVEPY 60

Query: 61  VLEENPFRILIEKGGDDNEDEEEDGKRKRVIFVD-VDSILFEHLLWLMYNDCSSLFKLNV 120
           VLEE PFR+LI  G   +  +    +  RV+++D VDSILFEHLLWL+ ND S+   L+V
Sbjct: 61  VLEEYPFRVLI--GSAKDRAKNRLNRTGRVVWLDHVDSILFEHLLWLLRNDASTFSDLDV 120

Query: 121 EEILDFYAQD 130
            EI++FYAQD
Sbjct: 121 LEIIEFYAQD 120

[Close]

BLAST of Bhi05G000383 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 41.2 bits (95), Expect = 7.4e-04
Identity = 27/83 (32.53%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 46  VVAGKEKREFLVDPFVLEENPFRILIEKGGDDNEDEEEDGKRKRVIFVDVDSILFEHLLW 105
           V+ G+ K+ +L+    L+      L+EK     ED+ EDG    +I V  + +LF+HLLW
Sbjct: 58  VLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNEDG--SCIITVKCEVVLFDHLLW 117

Query: 106 LM-YNDCSSLFKLNVEEILDFYA 128
           ++ Y D     ++++ E LD +A
Sbjct: 118 MLEYGD-----EVHILESLDDFA 133

[Close]

BLAST of Bhi05G000383 vs. ExPASy TrEMBL
Match: A0A0A0LK59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902380 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57
Identity = 119/135 (88.15%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MDCLVLPCYVMK-RRRRRSTRPRLGYHRLNKSNVGRL----DGAESSLVKVVAGKEKREF 60
           M CLVLPCYVMK RRRRRST+P LGYHRLNKSN GR     D AESSLVKVVAGKE+REF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 61  LVDPFVLEENPFRILIEKGGDDNEDEEEDGKRKRVIFVDVDSILFEHLLWLMYNDCSSLF 120
           LVDPFVLEENPFRILIEKGGDD+EDE+ DGKRKRVIFVDVD+ILFEHLLWLMYNDCSSLF
Sbjct: 61  LVDPFVLEENPFRILIEKGGDDDEDEDGDGKRKRVIFVDVDAILFEHLLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 131
           KLNVEEILDFYAQDF
Sbjct: 121 KLNVEEILDFYAQDF 135

[Close]

BLAST of Bhi05G000383 vs. ExPASy TrEMBL
Match: A0A5D3E5S1 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004380 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55
Identity = 115/135 (85.19%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MDCLVLPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLDG--AESSLVKVVAGKEKREFLVD 60
           M CLVLPCYVMKRRRRRSTRP LGYHRL+KSN GR D   AESSLVKVVAGKE+REFLVD
Sbjct: 1   MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 60

Query: 61  PFVLEENPFRILIEKGGDDNEDEEED---GKRKRVIFVDVDSILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR LIEKGGD ++DE+ D   GK+KRVIFVDVD+ILFEHLLWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 131
           KLNVEEILDFYAQDF
Sbjct: 121 KLNVEEILDFYAQDF 135

[Close]

BLAST of Bhi05G000383 vs. ExPASy TrEMBL
Match: A0A1S3CQ48 (uncharacterized protein LOC103503536 OS=Cucumis melo OX=3656 GN=LOC103503536 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55
Identity = 115/135 (85.19%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MDCLVLPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLDG--AESSLVKVVAGKEKREFLVD 60
           M CLVLPCYVMKRRRRRSTRP LGYHRL+KSN GR D   AESSLVKVVAGKE+REFLVD
Sbjct: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84

Query: 61  PFVLEENPFRILIEKGGDDNEDEEED---GKRKRVIFVDVDSILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR LIEKGGD ++DE+ D   GK+KRVIFVDVD+ILFEHLLWLMYNDCSSLF
Sbjct: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 144

Query: 121 KLNVEEILDFYAQDF 131
           KLNVEEILDFYAQDF
Sbjct: 145 KLNVEEILDFYAQDF 159

[Close]

BLAST of Bhi05G000383 vs. ExPASy TrEMBL
Match: A0A6J1EYP5 (uncharacterized protein LOC111437423 OS=Cucurbita moschata OX=3662 GN=LOC111437423 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 90/135 (66.67%), Postives = 102/135 (75.56%), Query Frame = 0


Query: 1   MDCLV--LPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLDGAESSLVKVVAGKEKREFLVD 60
           MDCLV  LPCYVMKRRRRR T PRL Y RLNKS          SLV+VV GKE+ EFLVD
Sbjct: 1   MDCLVLLLPCYVMKRRRRR-TAPRLPYRRLNKS---------ESLVRVVVGKERTEFLVD 60

Query: 61  PFVLEENPFRILIEKGGDDNEDEEEDGKRKR---VIFVDVDSILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR+L+EKG      EE+ GKR+R   +IFVDVD+ILFEH LWL+YND SSL 
Sbjct: 61  PFVLEENPFRVLMEKG----RFEEKQGKRRREEHIIFVDVDAILFEHFLWLIYNDSSSLL 120

Query: 121 KLNVEEILDFYAQDF 131
            LN++EIL FY+QDF
Sbjct: 121 TLNLDEILHFYSQDF 121

[Close]

BLAST of Bhi05G000383 vs. ExPASy TrEMBL
Match: A0A7N2N146 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.0e-33
Identity = 84/135 (62.22%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 1   MDCLVLPCYVMKRRRRRSTRPRLGYHRLNKSNVGRLDGAESS--LVKVVAGKEKREFLVD 60
           MDCLVLP  ++K   RR T  RLGY  L K      DG E S   V VV GKEKREFLVD
Sbjct: 1   MDCLVLPVTILK---RRCTGSRLGYRPLTK------DGFEESGHQVTVVVGKEKREFLVD 60

Query: 61  PFVLEENPFRILIEKGGDDNEDEE---EDGKRKRVIFVDVDSILFEHLLWLMYNDCSSLF 120
           PFVLEENPFR+LIE    +++++    +   +KRVIFVDVDSILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRVLIEMMKKNDQEKNFVVDHRSKKRVIFVDVDSILFEHMLWLMYNDCSSLF 120

Query: 121 KLNVEEILDFYAQDF 131
           KLN++EI+DFY+QD+
Sbjct: 121 KLNLKEIIDFYSQDY 126

The following BLAST results are available for this feature:

BLAST of Bhi05G000383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35290.1	3.0e-21	46.92	unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G12955.1	7.4e-04	32.53	SAUR-like auxin-responsive protein family	[more]

BLAST of Bhi05G000383 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi05G000383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK59	4.5e-57	88.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902380 PE=4 SV=1	[more]
A0A5D3E5S1	3.2e-55	85.19	Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CQ48	3.2e-55	85.19	uncharacterized protein LOC103503536 OS=Cucumis melo OX=3656 GN=LOC103503536 PE=...	[more]
A0A6J1EYP5	1.3e-35	66.67	uncharacterized protein LOC111437423 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
A0A7N2N146	2.0e-33	62.22	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35296:SF3	EXPRESSED PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR35296	EXPRESSED PROTEIN	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000383	Bhi05M000383	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane