Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGAAATGGCATTGTTCCACACGGACAATTACAAGAAGGACTCATTGAGGGTGTCATGCAAAATTTGGAGACTTTGATTAATGTGAGATCAGATAAAAAAAAAAAAAAGTTTCAAGCTAGGGAAAGGACCAAAGTAAGGAGGCGAGTTATGGAGGCTCCTAAGAAGGAAGAAGACTCAGAGAAAAATGAATCTGACTCTAACCCTATTATAGGTGGGCTAAAGATAGGAGGGACATGGGCCGAGAGGAAGAGGGGTTTTCACAATAGAAGGCCACAAG mRNA sequence
ATGTCGGGAAATGGCATTGTTCCACACGGACAATTACAAGAAGGACTCATTGAGGGTGTCATGCAAAATTTGGAGACTTTGATTAATGTGAGATCAGATAAAAAAAAAAAAAAGTTTCAAGCTAGGGAAAGGACCAAAGTAAGGAGGCGAGTTATGGAGGCTCCTAAGAAGGAAGAAGACTCAGAGAAAAATGAATCTGACTCTAACCCTATTATAGGTGGGCTAAAGATAGGAGGGACATGGGCCGAGAGGAAGAGGGGTTTTCACAATAGAAGGCCACAAG Coding sequence (CDS)
ATGTCGGGAAATGGCATTGTTCCACACGGACAATTACAAGAAGGACTCATTGAGGGTGTCATGCAAAATTTGGAGACTTTGATTAATGTGAGATCAGATAAAAAAAAAAAAAAGTTTCAAGCTAGGGAAAGGACCAAAGTAAGGAGGCGAGTTATGGAGGCTCCTAAGAAGGAAGAAGACTCAGAGAAAAATGAATCTGACTCTAACCCTATTATAGGTGGGCTAAAGATAGGAGGGACATGGGCCGAGAGGAAGAGGGGTTTTCACAATAGAAGGCCACAAG Protein sequence
MSGNGIVPHGQLQEGLIEGVMQNLETLINVRSDKKKKKFQARERTKVRRRVMEAPKKEEDSEKNESDSNPIIGGLKIGGTWAERKRGFHNRRPQ
Homology
BLAST of Bhi05G000378 vs. ExPASy TrEMBL
Match:
A0A5A7TC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00440 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 9.6e-09
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 MSGNGIVPHGQLQEGLIEGVMQNLETLINVRSDKKKKKFQARERTKVRRRVMEAPKKEED 60 M+GNG P G LQ G E VMQ LETLINV+ D +++FQA+ER +VRR+V+ EED Sbjct: 1 MAGNGGTPQGPLQ-GHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEED 60 Query: 61 SEKNESDSNPIIGG 75 SE+NES+SNP I G Sbjct: 61 SEQNESNSNPSIDG 73
BLAST of Bhi05G000378 vs. ExPASy TrEMBL
Match:
A0A5D3BY01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00400 PE=4 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 1.9e-04
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 10 GQLQEGLIEGVMQNLETLINVRSDKKKKKFQARERTKVRRRVMEAPKKEEDSEKNESDSN 69 G +E + + +MQ LE + N R D+ +++ QA+ER +VRRRV+ PK+EE+S +N S+ + Sbjct: 14 GHYRESINKEIMQCLEIINNARIDRLEQRLQAKERPEVRRRVVREPKQEEESNQNRSNFD 73 Query: 70 PIIGGLKIGGTWAER-KRGFHNRRPQ 95 II + G R GF NRR Q Sbjct: 74 RIIDEPRRGEQHGSRGTGGFQNRRLQ 99
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7TC25 9.6e-09 58.11 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BY01 1.9e-04 40.70 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G T C G G G A A A T G G C A T T G T T C C A C A C G G A C A A T T A C A A G A A G G A C T C A T T G A G G G T G T C A T G C A A A A T T T G G A G A C T T T G A T T A A T G T G A G A T C A G A T A A A A A A A A A A A A A A G T T T C A A G C T A G G G A A A G G A C C A A A G T A A G G A G G C G A G T T A T G G A G G C T C C T A A G A A G G A A G A A G A C T C A G A G A A A A A T G A A T C T G A C T C T A A C C C T A T T A T A G G T G G G C T A A A G A T A G G A G G G A C A T G G G C C G A G A G G A A G A G G G G T T T T C A C A A T A G A A G G C C A C A A G 20 40 60 80 100 120 140 160 180 200 220 240 260 280 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 39..94
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 46..66
Relationships
The following mRNA feature(s) are a part of this gene: