Bhi04G002055 (gene) Wax gourd (B227) v1

Overview
NameBhi04G002055
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionMitochondrial transcription termination factor family protein
Locationchr4: 68049489 .. 68059695 (-)
RNA-Seq ExpressionBhi04G002055
SyntenyBhi04G002055
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATAATACGTGGACGAACTTTTTTTTTAAGAAGGAAAAAGAAAAGGAAAAGAAAGGAGCGGTGAAGACAAACCAGAGCCTGATGGTTTATGTGGCTTTAAGCTACAAGCAAAGGACAAGAAGATTGGTGTCTTAGTGTGAGCCAATCTGTAGTTCGCATCTTCATAATTCTCGCACTGCCTCACCCTTCTTCTTCTTCTTCTTCAACCTCAACTCTCTACGCTTTTCACTTTCAATCCCTCCAATTTCAGGTACCTCCTCCGATTTCATTCAATCCTTGTTTTGTTTCTATAATACGAAGTAGCTTCTCTTAATTGGACTTGTTAACTGTTTTGTTTCGTTTTCGCATTCAGTTTTGATCGAAATTCCAATGCTCAAAAGAACCTCCTTCTTTGTGCTTCACGCAATTCAGTTCAATTCAATTCAATTAAGACAATATTCAAATCCAAGCTATGATCCACTTCTCTTGGAGGAGAAATGCCATTGGTTGAATTTTTTGCTCCATGATATAGTCATAGAACGCAGTATCCATATTGCATATTTGCATAATTCTAGTGCATTGTTTGGGAGATCACCTCATGTCGTGTAGCAACTTCTTTCTGTTTACGCTGGAGTTTTCGCTATGAATTGTTGCCTTTACTCTGGCAGCTCCACGAACAAGATTTTGATTATGACTACCTTTTGACGACTGGCAGTGATGGGATAAACACTATGTCTTTAGGATCAATTGTCTCTTCTTGTGTGAACCTAATTAGAAATTAGTCAAGCAGAAACAATAATGATAATCAAACATGGGACATGAACAATTGTAATGTAGAAACACCTGCTCAAGGCGAGGAGCAAAAAACCAGATATTTTAGTCAAAGTCTTCGCTATAATCATTAGTGGGCTACAAGGAGTTCTCCCTAGTCTCATGAATAAGTCTGGCTCTTTGTTTGAATGATCCATGAATGTGATTGAACTCAATCCCAAAAGTCAATGACTGCATATCAAATGCCCTCTAAGAGGCTTCTGAGGATCTCAACCACTTTTGTTTCACTTTTCATGTACTTATGTTTTCTTCCAAGAATTCTTTTGAATGCTCTATTTTGAGCATGGTCACCAATCTTACCTGTGGAACTGAATTTGAAGAGATCCTAGTTAGCCAATTGTCTACACAGGGCTGCCTCTTATTTTATGACAGCATTGTTATTTCGGTAGTCAAAACCTTGTACTCTTGAATGATTTCACTGTAGCCTTCAGTCAACATATTTTTGTGGGAGCACTAGCACCTACTGTTTTATCTTTCTGGAGGCATACTTGTGAACCTTTATATTTTTGTTGGGTCCAATTGTCCTTTAGTCCAATTTCCCATGACTTTCTTGATCAAAGTACTTTTCTTCTCTTGAACTCAGATACTGAGTAAAGTTGGCCATCTTAATAGAGTGAAACATGATTTTGTGTGGAAATTTGTCTACTAGCTTGTTGATGAACTTCTATTGGTAGTACCACTATTTCAAAAATGCTAATGTTGGAGGTAATTATAATTTGGAATTTGAAAACTCTATCTTTGATAGAATAAATCTCTTTGCATTAACTCACTTGGATCTTCTCCATATTTGAGTGGAACTCATTGTTGTTTCAAATAAAATGTTTTAACAAAATTTAGGAATTGGAGGAATTTTTTATGTGAGATGAGCCATGTTCTATAAATGGTAAATGTGTTGTGATAATCACATTTTTTATAATTGGTCCCACTGGTTCTTACCAAACTTCTTAATATGGTACAGGCATGCTAGGAAAATCGTTGGTGTCTCCCATATCAACCATTGATTCTGCTACTCGTTTCTGTTGTTCTACTGTGAGTAGCAAATTTTGCCTCGTATCATGCAATACTATGGGAATAACACATTATAGAGAACGTGTTAGGTGCACAAACAATCCCGCATTGGTTAAGAAAGGGAGAGATCCATAATGTATAAGTGAAGACAATTATCTTTATTAGTATGAAGTATTTTTGGTGATTTCAACAATCATGCCATTGAGGAGATATGTGAAGGTTCTGAAGTTTTCTGTAGAAATGCAATGGGAAATGGGGAAATAAGTGTTACATTATTTACTTCATACTCCTATTGTTTTGCATTTTCTCAAACAATAATTTTAAAGTCTCTTTTTAGTATTTCATAACGTATTCTTAATTCTCAACGCAGCGCAGCATTGCCACAGCCATATCAGATGCTGCACGTTCAAATGTAAGTTTCTCCTATCATCCTGCGAAGCATATGATAAAGGATGTGAGAAGACAAACTCCCTATCCCAGTAAGTGGGAAATCTGTTCGACTACTCAAGTTGAAAGCTTGACATTAAGTGATGAGGATAGGAAGACATGGGAAGCTTGTCGGCAAGCTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAGCAAGATAAGATGCTTGGAAAGGCGTTCAGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAGTTCCTAATATTGAAACTGTAAATGACATACTGGAATATCTGAGGACACTTGGTCTTTCGAATGACGATCTCTCTAAGCTGCTAAAAAAATTCCCAGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTTAAAACCAACGTACAATTGTTGGACAAAGAGTGGGGAATTCAAGGCAAATCATTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAATGTTGATTGTAAAGGAGACTGCATCGCAAAGTGCACCAGATGCTGGGTTCGATTTTAGGTACATTTTCATTTTCAGAATTTCTTATGTCAATCATAATTCATATACATGAAGCTACCTATTGAATGTTGTTATAGTTCTATTGTTAGGGTTTTCCATTATTGTAAATATCTTGTTATATTTTCCTTTTCTATGCTTTGTACACTAGTATATATTCACGTCTTTGGTGAATGAATAGAGTATTATGATTCTCTCTCAAACCTAAGAGTTTTACAAATGTCTTGCCAAATCATGTATGAATTACCCGTTTTCAGTTATTTGAACCATTGTTTTCAAGTTCATAAATGCACAACCTGTTCCGTCTCTCTGTTCTCTCATTTGTGTATTCTTTTAACATAAAATTATTGAAGTTTTATCCGATGCCTTGAACTGTTAAGAGCATATTTGGAAATGAAGAGCCACTATCTTTATTTTATTTACTTTTGCTTCCATTATTTTGTGAAAAAATAGTTTCCATAACTTTAAACATTTCGTAAGGAGTTAGTTTGGGGAAAGCAATTTCCCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACGGAATAAGCAAATACAATGAGCCAAAATAAGCAAGATAAAGCAAATGCAACCAAAAATAGTCTATAGCTAAACTAGTCCATAAAAGTAAAGCAAATACAATGAAATACAACTCATAACGGAACAAATTGGCTCTTTAAATGAAACTCCAAAACCAGTGTATCTGAAACTAAGAGAACAAACAACCATGTGATGAGGACAACTATTAGAAGATAATCCGAGGGAGAGGAAACCAGCTTCAACTTCAACAAAACTGATAATATAATCAACATTCCATAAAACCAAAGCTGTAATAGGAGATCAAACTACAAGAGCAATCGTCCATTCTTGTTAGCTAAAAAACAAACAAAATTTTTAACTACAGTAGCTTATAACATATTTTTACCCTTTTTGAATAATCTCATTGATGTATGAAATATATCCAATGGAGTACAAAAAGGGTCCTATTCAAAAGGTGTATGAAAGTTGTTTCCAATTTGCAACAAGGAAATTTAAATTGTATTCTTTTAGAGGCTGTGATTTTTTACACCAAAAGACAACATTGTAAATAGCCAACTCTAAGATGTCTTTGGGGAATCTTTCACAGTTCTTGAAGATTCTAGCATTCCTTTCATCTAAAAGCTTGGACAACACCGCACAAACAATGCAAGCCTTTGTCACTTTGAAAGGGTGATCCAATAAGGTCATTCTAAGCCAGCCAATAGAATCACTCAGAAGCCGTGGTCTAATTAAAAGAGTTAAACAGTTGGGCGTGTATTCTTTCATTTTCTTTCCCAATGAAAGTTGTTGATTTCATAAAAAAAGAAAAAAGAAGAAGAAAAAAAAAAAGAGTGAAACAGTTCAGCCCATATATCACTGGCAAAAGGGCCGTGGAAAAAAAAAGTTGGAATTGGGTTTCATTACTTTCCTTGCAGAGGCAGCACTATGATCGGGAAATATTAATCCATGAGCATCTTCTTTGAAGTTTATCCGTAGAATTAAGACAAGAATGACTAACTTCCCACAATAGGAATTTGTTCCTTTTAGCGCAAGGGTGCTTTCGTAACTTGTTGTATAAGTTATTTTGGGAAGAAGGTCCATCAGATGACAATTGGTTCATGAGGGACTTGGTGGAGAAAAGACCCTGCTTTCAAGTTGGCAAGACCAAAAATCCAGTTGGGCAATAAGCTGGATGCTAGGGACGAGGTGTGTGAAACTGGCCCACCATTCGTTGATGTCATTGTCTTTGAGGAATCTTCTGAAGTTTAAGGTTCAAGAGCCTGTGGGTTGGTTCCAAACCTCTTCAATTGTGGCAGCTTTCGACTCAGCAATAGCAAAGAGATGAGGGAAGCATTGTTTGAGGGGGGCAGAACTAATCCATAAATCAGACCAAAAAGCCGTGGAGGAGCCATTACCAACTCTACAAAGAGTGTTGTAGTAAATAAGGCCTTTTTAGTTTCATAATATGCTGCCAAGTATTTTTAGATGAAACATTGCCATTGTTGGATGGTTTTTTTTATCAAAATGACAAGACACAAATTTCGCCGTGATAAAATTTCTCCAAAGAGCCTCTTTTCCTGGACTAAAACGCCAAATCCATTTAGCCAAAAAGGATGTATTTCAAAATATAATGTCGAAAATCCAAGCCCTCCCGCATCTAATGATTGCTTGAGAATATCCCATCTGAGGAGATGAGTGGTATTGCTAGTTCTGTTACCACTGTAAAGAAAATTTTCGAACCTTTTATCAATAACCTCTGCCACCTTGGAAGGGATTTGAAAGAGTGACAAGTAATTCATAGGCAACTTTGATAGTGTAGCACTCAATAGAGTCAGTCGACCTCCTTTCCAAAGGAAATTGTGTTGCCATGATTGTAGCCTCGTATGACTTATCAATCTTGACAAGAATGGGTTGCCAAAAGGATAGAGATGACATAAAGAGGTAACCCAAGATAAATAAAACGCCAAGATCCCACCTTACAATCATACTTAACAGCAATGTGATCAACCCACAAACTATAACATATTTTTACTGAATTTGTGTTCATGTAAGTGAAGTTTGTTCTACGAAACAACTCACCACACAAGTTATTTCTTTAGTTCTTAAGCAACTTCTAATTGATTTTGATATGAGCAATGCCTTAGTGCACAAAGTTTGCGTAGTAGATTTAATATGCTTTATGCCGTTTGTGCCTTTCTTTTATTAATGGAAAAGTAATATTAGACTAATAATATTCCATTTATATATATGTTTAACAAAGAATCATATGAAATTATTTTGAAAGTACTCCAACAATTCCACGTATATGCACTAAAAACATGTTATCAATCCATCCAAAATTTCTGTAATAGCAACATTTAATGACTTTTGGAAATATCATCTTCTCTCCCGGTCTCTAAATGGGCTACCTCAATGCCAAAAAATTCTTGGTTATCTTTTTGCTTGTACACATACACAATGTATGTTTTTTCTGCAATAAAAGAATATTCTAAATCATTTTTTTTTTTACTTTTTTACTTTATTTTTTTTTTATCAATTATTTGTTACATCATTCTCTTTTGCTTCATTATCATCTTTTTCTTTTCTTTCTTTCTTTTACAGAGCTATAATGGGTCTCAATCTATGGTTGAATATTCTCAAAAGATAGGTATGCTTTTGATTTAATTTATTATCTTTGAATATTTTGTCAAAGAATATTCAAAAGTATGCGTGAGTATTAAAAAGCCGAATATTTGCATAAGAGCTAGCGAGATGTGCTGCAAAAGATTTCTTAAATATACTATCAATTAGAAAATAAGACCTTATAAAAAATACAACACCGATTTTTATTCCAATTGTAAGCAACACAAGCCGCTTATATATAGTACAATAGGAGTGGGGGAATCAACATAATCGGAAAAAAAACAAAACATGGTAGAGAAAATGCAAAGCAAAATGCAAGAGAAACCCTTGGCCTCGATATATTGATAGGTAAAATAACACCAACCCTATATAGATGGCCTGGGAGAAAAACTCTTGCAAAACACGCTCACCCATAACAAAAGTCCATAATAGAATGAATTTTGGGAGAAGAAGGACCCAACTAAGCTTACTGAGCTGTTTTAATAGGTGAATTCAAACCATATACATCTGGATCGATAACACATCTATTATATTTGCCAGTTGAGCTATGCTCGTTTTGACATTTTTATAGACATTAATAGTATTTAAAATGTATAAGCATAAGTGGAAAATACGTAGAAATTAAAGCACCTCCAAATATATAAATGAAAATAGTATTAGAAAAGTAGAGTAATAGGAAATTAGGGGCACTTGGGCTTATTGCCATGGGTCTTGAGGCGAGCATAGCAAGGACAAGCTTGGTGGTTGCCGTAAGTGCCGGGCGGAACGCAGTGGCAACGACTGCAGCAAGTTCCACATGCCCGCATACATATCTTCTTTCTGAAAACTTTACTGCATCTCCTTGAGCATTCCCTTTTGCAATCTAACCCAATCCAATCCGATCTTTAATTTTCTTTATATAATTTTTTTTTTGTTATGTTACATGTTTAGTTTTCAGAGTTTTGTTGGGTGACGATTTTGATTTTCTGTTTTTGAAATTTATGTTTATTTTCTCCTAAATTGCATATTATAATTATCGAATTTCTTAATCGACACTTAAATTTTTAGTTAAATTTAAAAAATTAAAACAAGTTTATGAAAATTATATTTTCTTTTAGTTTTTAAATTTTGTGTTTAGTTTTTTAAAATATTAGAGGAAAATGAATAACAAAACAAAGAAGCTTATAAATGGAAGTAATGTTTTTTAAGCTCAATTTTAAAAAATCAAAAATAAAAAACTAAGGCTCCATGGTGACAGTTTAGGCATTGGTAACCATTTTATTTTTTGTTGTTGTTTTTTAAAATTAAGTCCTATTGACATTGCTATCCCCTCCAAATTTCTTTATTTGTTATCAACTTTTTGCTAATAGTTTAAAAAACCAAGCCAAAATTTGAGAACTAAAAAAAGTAGCTTTCAAAAAGTTGTTTTTGTTTTTGGAATTTGGCTAAAAATTCAACCATTGTACTTAAAGTTGTAAATCATTGTAAGAAATGTGATGAAATAGACTTAATTTTCAAAAACAAAAACAAAAAACCAATACTTACCAAACGGGCTTTTAGTTTTTGGTTTTTGAAAATTAAGTTTGGTTTTGTTTCAATTTCTTACAATAGTTTTCATCTTTCTAGAGTAAAAGAGTTGAATTTCTAGTCAGATTTCAAATTCCAAAAACAAATTTTTGAAGACTACTTTTTTAGTATTCAAAATCTGGATTGGTTTTTCAAGAATTATGTTAGCAAAAAGTAGATAATAAGGCAATAAATTTAGAAGTGAAAATTGAAAGGAGTGTTTTTATAGACTTAATTTTCAAAAACTAAAATCTAAAAACAAAATAAGTATCTAACGAGTGCACAAACTTTCTATTTCATGTCTAATATTTCTTTGAATTTTATGAAGTGTCTAATTAGCTCTTATACTTTTGATTTTGTATCTGATAAGTTTTTTAACAAACTTTTTATTTGTCTAATAGAACTTTGACACATTTTTTAGATTAAAAAAAATTAAAATTTATAGTTCTATTAGACATGAAATTCACTTTTATATTTAATATATTTGTTAATTTAAAAGATAAAATGGTGAGAGTTTTAGAAATCTATAAGGGCTTTGACGATTTTAAAGTTTAGAAACTTATTAAATAAAATATAAAAATTTAAAGAATAAAGTTCTTTATTTACATATATATTATTACTATTATTAGATTACATGGCAACTTACTGATTTTTGGATGATAGTGATACTTTTTGGTGAGAGCTACTGTGTTGGTCCCTTCATCCACCTGAATCCAATACAATGTCAATATTCATATGATTGTTATAATTATTTTCATTCACCTAACTCTTTTGTTTTTCTAATAATTTAGGACATGTTATGACTTTTGTTTAATTAATCAGTTAAAGGTTGAGAACTAGGCTTAGAAATCACATATATTCTTCTTTTAACTCTTCATTTATTCAAACTACGCCAAACATACATATGCTCAACATCTTTCTTATATATATAAAGCCGAAATTGTATCTCGCACTTTGATATATATTCATACCATGTTAAAATTTTCCTAAACAAAAATAATTTTAGTGATTAACGGGCTATTTAGGTCACTGAGTGTTGGTTATTATAGTTCATGAGTATTATAGTATGTGGATTATTATAAGATGTTTAGGGTGCATACTACATTTAGTTTGGATTATAATAATTTGTGTTTGGGGTGCGGATTATTTTAGACTAAGTTATAAATATGGACAAAGGATAGTTACAAAATAATAAACATTGTAGACAAAATAGTAGACACGGTGGATAGATAAAGGAGATTTTTCAAATAGTTTTATTATAACTAAGTATGAGTTTTAATAATTGGAAACCTCTATTATAATGAGAAACCCAAATATCGGGTGGGTTATATAATAGTCCACTCTACCAGGCAAGTTTGTGGTTTAACTGCCCCTAAGAGACTAGAACAATAAGTTGGAATTGTTAAGCAGTGGTTAATTATTTTTAACCATATTAGCTATAAGCCTTCCTTATTTCAAAATTTCCATCCAATTAATTCCAAAAACTTAGAAAGGTGATGATGGAAGGGATAAAGGGAAGCTAGAGAGAGATGGAGAACACTCACAGTAGTGAAAGCCTCTGAAAAACCCTACAATAAAATACATAAAGAAAATTCATTAAATGAAAAAGTTTTAAATTGGTTACTGGAAATAAAAAATGTAAAATGTAAAATCATATATATATATATATTATTACCTGTAAGAGAATGGAAAGAATAATGAAAATGCAAAGAAGACTGAGTGGCTTCATTTCTCTAAAAAGATATGCCCAAAATTTGATGGATGAACTCAGGTGTGAAGATGGAGGGATATATATAGGTTTTATTTTTTCTTTTCCTTTTATTTTCATTATAAGACAAATATGAGTAAAATTACATACTTGTCCTTAAATTTTTCATATTCACATATATTATTTGGTTTTTGTGTTCCTTTTTTTTTTTTTGTAAATAAGTTGGTCTCTTTTTCCTTATTGTCTTCTTGCTGCCATTAACCCTTAAAAGAAAGGGGAAAAAAAGTCATCCAAGCAAAGTTTTGTTCCTTTTAACTTTATGCCAATCGTAGTGCTTTTCCACATTCTCATGGAAACAATTCAAAGGCTTGTTTACAAAGTGGAGTGGTTTAAAAGAAACACCTCTTTCACAACGCTTTAATTTATGGTCTCTTTATACATATTTATGTGTCAAGTTAGACAAATTTAATTTAATCTAATAGATGTTCTTCAATATAGACATTTATTATCTATCCAAAGGTTAGAGTTTCAAATCTCCCATTTTATATATAATTGGATTCAATAATTAAAAAATAATAATAAATAAAGGAATTGATGTCAGTATGTTTATAAATTTCAATTGTCTTTATACAGATGAGAATAAACAGCTGTGTTTTTCTGATTATTCTTTACATGAATCCAAAAGGCCAACATTTATAAAGCAAAAAGGACACACCCATACACAGGTTGGGTCATTCTCCTACCACAAACACTCCAACATTATCAATTACAAGAGGCTTCTGTTGGAATAAAGGGTAGGTAGCTCTTCATTTGGGGTGACATCTTTCTAATTTCACGAGTTGTATCGTTTCATAAATAGGTACGTTTTTTTTTTTTTTCATAGTTAACCAATTTGAAAAAGAGACATGGTTATTCGAATGGCCACGAATCAGTATATAAAATATGTCTTTTCTTCAAGTTACATTTTCACTTTTTTTTTCCGCAAGCACCTTTCTTCCTTTTGTAAATTATAAATTT

mRNA sequence

AAAAATAATACGTGGACGAACTTTTTTTTTAAGAAGGAAAAAGAAAAGGAAAAGAAAGGAGCGGTGAAGACAAACCAGAGCCTGATGGTTTATGTGGCTTTAAGCTACAAGCAAAGGACAAGAAGATTGGTGTCTTAGTGTGAGCCAATCTGTAGTTCGCATCTTCATAATTCTCGCACTGCCTCACCCTTCTTCTTCTTCTTCTTCAACCTCAACTCTCTACGCTTTTCACTTTCAATCCCTCCAATTTCAGGCATGCTAGGAAAATCGTTGGTGTCTCCCATATCAACCATTGATTCTGCTACTCGTTTCTGTTGTTCTACTCGCAGCATTGCCACAGCCATATCAGATGCTGCACGTTCAAATGTAAGTTTCTCCTATCATCCTGCGAAGCATATGATAAAGGATGTGAGAAGACAAACTCCCTATCCCAGTAAGTGGGAAATCTGTTCGACTACTCAAGTTGAAAGCTTGACATTAAGTGATGAGGATAGGAAGACATGGGAAGCTTGTCGGCAAGCTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAGCAAGATAAGATGCTTGGAAAGGCGTTCAGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAGTTCCTAATATTGAAACTGTAAATGACATACTGGAATATCTGAGGACACTTGGTCTTTCGAATGACGATCTCTCTAAGCTGCTAAAAAAATTCCCAGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTTAAAACCAACGTACAATTGTTGGACAAAGAGTGGGGAATTCAAGGCAAATCATTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAATGTTGATTGTAAAGGAGACTGCATCGCAAAGTGCACCAGATGCTGGGTTCGATTTTAGAGCTATAATGGGTCTCAATCTATGGTTGAATATTCTCAAAAGATAGGCCAACATTTATAAAGCAAAAAGGACACACCCATACACAGGTTGGGTCATTCTCCTACCACAAACACTCCAACATTATCAATTACAAGAGGCTTCTGTTGGAATAAAGGGTAGGTAGCTCTTCATTTGGGGTGACATCTTTCTAATTTCACGAGTTGTATCGTTTCATAAATAGGTACGTTTTTTTTTTTTTTCATAGTTAACCAATTTGAAAAAGAGACATGGTTATTCGAATGGCCACGAATCAGTATATAAAATATGTCTTTTCTTCAAGTTACATTTTCACTTTTTTTTTCCGCAAGCACCTTTCTTCCTTTTGTAAATTATAAATTT

Coding sequence (CDS)

ATGCTAGGAAAATCGTTGGTGTCTCCCATATCAACCATTGATTCTGCTACTCGTTTCTGTTGTTCTACTCGCAGCATTGCCACAGCCATATCAGATGCTGCACGTTCAAATGTAAGTTTCTCCTATCATCCTGCGAAGCATATGATAAAGGATGTGAGAAGACAAACTCCCTATCCCAGTAAGTGGGAAATCTGTTCGACTACTCAAGTTGAAAGCTTGACATTAAGTGATGAGGATAGGAAGACATGGGAAGCTTGTCGGCAAGCTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAGCAAGATAAGATGCTTGGAAAGGCGTTCAGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAGTTCCTAATATTGAAACTGTAAATGACATACTGGAATATCTGAGGACACTTGGTCTTTCGAATGACGATCTCTCTAAGCTGCTAAAAAAATTCCCAGAAGTTCTTGGCTGCAATCTTGAGCAGGAGCTTAAAACCAACGTACAATTGTTGGACAAAGAGTGGGGAATTCAAGGCAAATCATTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAATGTTGATTGTAAAGGAGACTGCATCGCAAAGTGCACCAGATGCTGGGTTCGATTTTAG

Protein sequence

MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPSKWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDRKKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQGKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Homology
[Close]
BLAST of Bhi04G002055 vs. TAIR 10
Match: AT4G09620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 253.4 bits (646), Expect = 1.6e-67
Identity = 127/217 (58.53%), Postives = 162/217 (74.65%), Query Frame = 0 

Query: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60
           M+G SL SP++T+ SA  F  S   + T  ++     ++ SYH        VR  +   S
Sbjct: 3   MVGNSLASPLATLGSAKCFRHSAVDLVT-YTNVLPLRLNSSYHGVN---GGVRTSSYSRS 62

Query: 61  KWEI-CSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGED 120
           KW + CSTTQVE+   S+ED   WE C++ALS F FSVEE+DK+LGKAF HIHSPYW E+
Sbjct: 63  KWIVFCSTTQVET---SNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWTEE 122

Query: 121 RKKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGI 180
           R KE P +ET+N ILE+LR+LGLS++DL K++KKFPEVLGC+LE+E+K N+ +L+ +WGI
Sbjct: 123 RVKENPKVETLNQILEFLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQWGI 182

Query: 181 QGKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 217
            GK LRNLLLRNPKVLGYNVDCKGDC+A+CTRCWVRF
Sbjct: 183 TGKQLRNLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF 212

[Close]
BLAST of Bhi04G002055 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06
Identity = 22/75 (29.33%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 130 VNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQGKSLRNLLL 189
           +  ++EYL  LG+     ++L++K P +LG  L+  +K NVQ+L +++ ++  SL +++ 
Sbjct: 287 IKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQIL-QDFNVRETSLPSIIA 346

Query: 190 RNPKVLGYNVDCKGD 205
           + P+++G ++  K D
Sbjct: 347 QYPEIIGIDLKPKLD 360

[Close]
BLAST of Bhi04G002055 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.0e-05
Identity = 30/114 (26.32%), Postives = 58/114 (50.88%), Query Frame = 0 

Query: 96  SVEEQDKMLGKAFSHIHSPYWGEDRKKEVPNI-------ETVNDILEYLRTLGLSNDDLS 155
           S+EE+ K L K F ++  P  G  R   V  I       +T+   + +L+ +G+ N+ + 
Sbjct: 383 SIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIG 442

Query: 156 KLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQGKSLRNLLLRNPKVLGYNVDCK 203
            +L KFP +L  +L ++++  V  L    G+  K +  ++  +P +LG ++  K
Sbjct: 443 NMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTK 496

[Close]
BLAST of Bhi04G002055 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.3e-05
Identity = 22/75 (29.33%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 130 VNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQGKSLRNLLL 189
           +  ++EYL  LG+     ++L++K P +LG  L+  +K NVQ+L +++ ++  SL +++ 
Sbjct: 287 IKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQIL-QDFNVRETSLPSIIA 346

Query: 190 RNPKVLGYNVDCKGD 205
           + P+++G ++  K D
Sbjct: 347 QYPEIIGIDLKPKLD 360

[Close]
BLAST of Bhi04G002055 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.1e-04
Identity = 30/114 (26.32%), Postives = 58/114 (50.88%), Query Frame = 0 

Query: 96  SVEEQDKMLGKAFSHIHSPYWGEDRKKEVPNI-------ETVNDILEYLRTLGLSNDDLS 155
           S+EE+ K L K F ++  P  G  R   V  I       +T+   + +L+ +G+ N+ + 
Sbjct: 383 SIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIG 442

Query: 156 KLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQGKSLRNLLLRNPKVLGYNVDCK 203
            +L KFP +L  +L ++++  V  L    G+  K +  ++  +P +LG ++  K
Sbjct: 443 NMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTK 496

[Close]
BLAST of Bhi04G002055 vs. ExPASy TrEMBL
Match: A0A1S3B2X0 (uncharacterized protein LOC103485418 OS=Cucumis melo OX=3656 GN=LOC103485418 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-111
Identity = 199/216 (92.13%), Postives = 203/216 (93.98%), Query Frame = 0 

Query: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60
           MLGKSL SPISTIDSATRFCCSTR  ATAISDA  SNVSFSYHPAKH IK VRRQ PYP 
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120
           KWE+CS+TQVESL LSDED+KTWEACRQALSVFSFSVEEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180
           KK+VPNIE VNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 217
           GKSLRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 216

[Close]
BLAST of Bhi04G002055 vs. ExPASy TrEMBL
Match: A0A0A0LQN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402090 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.2e-108
Identity = 196/216 (90.74%), Postives = 201/216 (93.06%), Query Frame = 0 

Query: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60
           MLGKSL SPISTIDSATRFCCSTR  ATAISDA  S+VSFS H AKH IK VRRQ PYP 
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNPYPR 60

Query: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120
           KWEICS+TQVESL LSDED+KTWEACRQALSVFSFSVEEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180
           +K+VPNIE VNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 EKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 217
           GKSLRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 216

[Close]
BLAST of Bhi04G002055 vs. ExPASy TrEMBL
Match: A0A6J1JTP6 (uncharacterized protein LOC111489650 OS=Cucurbita maxima OX=3661 GN=LOC111489650 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.8e-104
Identity = 189/216 (87.50%), Postives = 199/216 (92.13%), Query Frame = 0 

Query: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60
           MLGKSLVSPIST+DS TR C ST  I TA S A  SNVSFSY PAK+MI DVRRQ+PYP 
Sbjct: 1   MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSGAVCSNVSFSYQPAKYMIMDVRRQSPYPR 60

Query: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120
           KWEI ST+QVESL LSD+D+KTWEACRQALS+FSFS EEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEIHSTSQVESLVLSDDDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180
           KKEVPNI+TVN+ILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLL+KEWGIQ
Sbjct: 121 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEKEWGIQ 180

Query: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 217
           GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 216

[Close]
BLAST of Bhi04G002055 vs. ExPASy TrEMBL
Match: A0A6J1FK31 (uncharacterized protein LOC111444935 OS=Cucurbita moschata OX=3662 GN=LOC111444935 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.8e-104
Identity = 189/216 (87.50%), Postives = 199/216 (92.13%), Query Frame = 0 

Query: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60
           MLGKSLVSPIST+DS TR C ST  I TA S+A  SNVSFSY PAK+MI DVRRQ+PYP 
Sbjct: 1   MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVCSNVSFSYQPAKYMIMDVRRQSPYPR 60

Query: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120
           KWEI ST QVESL LSDED+KTWEACRQALS+FSFS EEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEIHSTAQVESLVLSDEDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180
           KKEVPNI+TVN+ILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLL+KEWGIQ
Sbjct: 121 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEKEWGIQ 180

Query: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 217
           GKSLR+LLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRSLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 216

[Close]
BLAST of Bhi04G002055 vs. ExPASy TrEMBL
Match: A0A6J1DF32 (uncharacterized protein LOC111020227 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020227 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.6e-99
Identity = 181/216 (83.80%), Postives = 191/216 (88.43%), Query Frame = 0 

Query: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60
           MLGK+LVSPIST+DSATRFC ST    TA  D A SNVSFS  P K++ KD RR +P P 
Sbjct: 1   MLGKALVSPISTVDSATRFCFSTPGFVTAKPDGACSNVSFSNRPWKNVTKDARRHSPCPR 60

Query: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120
           KWEI ST QVESL LSDED+KTWEACRQALS+FSFS EEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEIHSTAQVESLILSDEDKKTWEACRQALSMFSFSAEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180
           KKEVP IE VNDILEYLRTLGLS+DDL KLLKKFPEVLGCNLEQELKTN+QLLDKEWGIQ
Sbjct: 121 KKEVPKIEIVNDILEYLRTLGLSDDDLCKLLKKFPEVLGCNLEQELKTNIQLLDKEWGIQ 180

Query: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 217
           GKSLRNLLLRNPKVLGYNVDCKGDC+AKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYNVDCKGDCMAKCTRCWVRF 216

The following BLAST results are available for this feature:
BLAST of Bhi04G002055 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G09620.11.6e-6758.53Mitochondrial transcription termination factor family protein [more]
AT4G02990.15.9e-0629.33Mitochondrial transcription termination factor family protein [more]
AT2G21710.15.0e-0526.32Mitochondrial transcription termination factor family protein [more]
BLAST of Bhi04G002055 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZT968.3e-0529.33Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL37.1e-0426.32Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Bhi04G002055 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B2X05.3e-11192.13uncharacterized protein LOC103485418 OS=Cucumis melo OX=3656 GN=LOC103485418 PE=... [more]
A0A0A0LQN84.2e-10890.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402090 PE=3 SV=1[more]
A0A6J1JTP64.8e-10487.50uncharacterized protein LOC111489650 OS=Cucurbita maxima OX=3661 GN=LOC111489650... [more]
A0A6J1FK314.8e-10487.50uncharacterized protein LOC111444935 OS=Cucurbita moschata OX=3662 GN=LOC1114449... [more]
A0A6J1DF324.6e-9983.80uncharacterized protein LOC111020227 isoform X2 OS=Momordica charantia OX=3673 G... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 148..180
e-value: 0.0034
score: 26.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 134..199
e-value: 1.4E-9
score: 37.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..215
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 122..211
e-value: 1.3E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR13068:SF192MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 1..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M002055Bhi04M002055mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016020 membrane
molecular_function GO:0003690 double-stranded DNA binding