Bhi04G001859 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001859
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPLAC8 family protein
Locationchr4: 62274063 .. 62275664 (-)
RNA-Seq ExpressionBhi04G001859
SyntenyBhi04G001859
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCAAATGGATGCTTCGCTTGTAACGACGTCGTTCATTGCAGAGCCAAACCCATTTCGGCTTCATCCTCACCCACCATTGCATTGCAACTCGCTTTCTTGTTGACCATTGCCTTCTCTCTTTTGATCTCAGTTATCGAAGGAACTTGGGTTCTTACATGCCATTTTTGCGGTATGTGGTGAACAAAACTTACTCTGCTTTAGCCTTCCATATTTCTCTGAAGCTTTGCGATGATTAAGGATAGTTTTGTGTAATCGGATGATTGAACTTCTCTGTTCTTGGGAGAATCCTCGTGGGATCCGCTAATTTCAGTTTTTAGGTAAGTTGTATTGGCTCTGGCTTGTAAATTTTCCATTCAGTTTGTGGGTGTGTTCTGATTCTTCAAGAGCGAAACTGGTATTCCTGAACTTTGGTATTTTATAAAGTAAACTTTAGTGTGTGGAATTTCAGACTTAAGAGTTTGGGGAATTACTGAATTGTGTTTCAATCACTGTTTATGGTGTTGGTTTCTTAGTTTGGGAAGGTTTGATTTGTTTTTCTGGGTTAAACTTTCGTTTTCGACTGTGTGTTTCATTTGCCCAACGGTTCATGTTTCTGGTTAGATTTGTTTGATTATTCTATTTTGGGGGTTTTCTTGAGCTTCATGTTCTAGTTGTAGGCTTCCCATTTCTTGTGCTTAATGTAGTATTGTTCTCCCTTCATTTATTAACTTCCCAAATTTGACTCTGGCTGAATGACTAACAGAGATTTTTGGGCCAACAATTTTGTATTGATTGAACATGTTTGAAACTTTTTGCAGCAATGACCTCAACCAACGATAGAAATCAATGGTGAAATAGAAATATCTAACAGCAAAGAAGGAGAAGCTCAAAATGCTTTCTTCTCTACATCTCTAAAAAACCTATTGCATGATGAAGTCACACAAAGAAGATCCCCTTTTCCATTGCTGTGGTGGCTCCTATTAAGAAAAGATTCCTTCAACTTTGGTTCAGCATCTGCTAGGTTCAGCAGATTGCTAAGGGAAAGACGAACATTTCACGATCTGTGCATTCATCAATCGTCATATATTCGAGAGCGTATAAGTGAAGTATTTTCTAGAAAATTGATTGGATTCACTCACTGAACATGAGTAAAACATGATTAGAGACCAATGAAACATAGCTCTTTATCATTGGATAATCGGTGTTGCTGTGTCAGGTGCAATCTTGTCTTGTCATGACTGGGATGTAAATGCTGCATTGCAAAAAAGTCCAGAGAGAATGTTGGTTGAAGTCAACAATCAAATTCTTAATGCATTGTTTACCCTTATGTGTCTGTACCAACATCCAAAGCGGATCTATCATCTCATACTTCTATCTAGATGGAAACCTGAAATGTTACTAGACTTAGAAAAGCTTTATTGCAAGGATGGAACTTACAAGCCTCATGAATGGGCGCACATGTGTGTTATAATTCTCCTAAATGTTAACTGCTTTTGCACAGTATGCACTTTGTTGTCTGAATCTTGGTTACAGGAGGTCTCAGCGTCCACCCATAGGAGTAGGAAATGCATATCTGATGGCAATGCTGCACCGGCCGTTGCTGGTGTCTTTCTATAA

mRNA sequence

ATGGGGTCAAATGGATGCTTCGCTTGTAACGACGTCGTTCATTGCAGAGCCAAACCCATTTCGGCTTCATCCTCACCCACCATTGCATTGCAACTCGCTTTCTTGTTGACCATTGCCTTCTCTCTTTTGATCTCAGTTATCGAAGGAACTTGGGTTCTTACATGCCATTTTTGCGGTGCAATCTTGTCTTGTCATGACTGGGATGTAAATGCTGCATTGCAAAAAAGTCCAGAGAGAATGTTGGTTGAAGTCAACAATCAAATTCTTAATGCATTGTTTACCCTTATGTGTCTGTACCAACATCCAAAGCGGATCTATCATCTCATACTTCTATCTAGATGGAAACCTGAAATGTTACTAGACTTAGAAAAGCTTTATTGCAAGGATGGAACTTACAAGCCTCATGAATGGGCGCACATGTGTGTTATAATTCTCCTAAATGTTAACTGCTTTTGCACAGTATGCACTTTGTTGTCTGAATCTTGGTTACAGGAGGTCTCAGCGTCCACCCATAGGAGTAGGAAATGCATATCTGATGGCAATGCTGCACCGGCCGTTGCTGGTGTCTTTCTATAA

Coding sequence (CDS)

ATGGGGTCAAATGGATGCTTCGCTTGTAACGACGTCGTTCATTGCAGAGCCAAACCCATTTCGGCTTCATCCTCACCCACCATTGCATTGCAACTCGCTTTCTTGTTGACCATTGCCTTCTCTCTTTTGATCTCAGTTATCGAAGGAACTTGGGTTCTTACATGCCATTTTTGCGGTGCAATCTTGTCTTGTCATGACTGGGATGTAAATGCTGCATTGCAAAAAAGTCCAGAGAGAATGTTGGTTGAAGTCAACAATCAAATTCTTAATGCATTGTTTACCCTTATGTGTCTGTACCAACATCCAAAGCGGATCTATCATCTCATACTTCTATCTAGATGGAAACCTGAAATGTTACTAGACTTAGAAAAGCTTTATTGCAAGGATGGAACTTACAAGCCTCATGAATGGGCGCACATGTGTGTTATAATTCTCCTAAATGTTAACTGCTTTTGCACAGTATGCACTTTGTTGTCTGAATCTTGGTTACAGGAGGTCTCAGCGTCCACCCATAGGAGTAGGAAATGCATATCTGATGGCAATGCTGCACCGGCCGTTGCTGGTGTCTTTCTATAA

Protein sequence

MGSNGCFACNDVVHCRAKPISASSSPTIALQLAFLLTIAFSLLISVIEGTWVLTCHFCGAILSCHDWDVNAALQKSPERMLVEVNNQILNALFTLMCLYQHPKRIYHLILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHMCVIILLNVNCFCTVCTLLSESWLQEVSASTHRSRKCISDGNAAPAVAGVFL
Homology
BLAST of Bhi04G001859 vs. TAIR 10
Match: AT3G10980.1 (PLAC8 family protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-29
Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 0

Query: 51  WVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQHPKRIYHL 110
           W+L     GAIL       +N AL K  +R    EVNNQILN LFTLMCLYQHPKR YHL
Sbjct: 134 WILVVAVSGAILFMVMTGMLNHALPKKSQRDAWFEVNNQILNGLFTLMCLYQHPKRFYHL 193

Query: 111 ILLSRWKPEMLLDLEKLYCKDGTYKPHEWAH-MCVIILLNVNCFCTVCTLLSESWLQEVS 170
           +LL RWK + +  L K YCKDGTYKP+EW H M V+ILL++NCF       ++  L  ++
Sbjct: 194 VLLCRWKHDDITKLRKAYCKDGTYKPNEWMHIMVVVILLHLNCF-------AQYALCGLN 253

Query: 171 ASTHRSRK-------CISDGNAAPAVAGVF 191
               RS +       CIS    APAVAG++
Sbjct: 254 VGYRRSERPPIGVAICISAAIGAPAVAGLY 276

BLAST of Bhi04G001859 vs. TAIR 10
Match: AT5G05350.1 (PLAC8 family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 67/150 (44.67%), Postives = 89/150 (59.33%), Query Frame = 0

Query: 44  ISVIEGTWVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQH 103
           ++++   W+      GAIL       +N AL K  +R +  EVNNQILNALFTLMCLYQH
Sbjct: 107 LNMVMFLWIFVVAVSGAILFMVMTGMLNHALPKKSQRDVWFEVNNQILNALFTLMCLYQH 166

Query: 104 PKRIYHLILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHMCVII-LLNVNCFCTVCTLLSE 163
           PKR YHL+LL RWK + +  L K++CK+GTYKP+EW HM V++ LL++NCF         
Sbjct: 167 PKRFYHLVLLCRWKQDDVTTLRKIFCKNGTYKPNEWIHMMVVVLLLHLNCFAQYALCGLN 226

Query: 164 SWLQEVSASTHRSRKCISDGNAAPAVAGVF 191
              +           CIS   AAP  AG++
Sbjct: 227 LGYRRSERPAIGVAICISFAIAAPTAAGLY 256

BLAST of Bhi04G001859 vs. ExPASy TrEMBL
Match: A0A6J1HJL9 (uncharacterized protein LOC111464682 OS=Cucurbita moschata OX=3662 GN=LOC111464682 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 7.4e-32
Identity = 87/150 (58.00%), Postives = 100/150 (66.67%), Query Frame = 0

Query: 51  WVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQHPKRIYHL 110
           W++     GAIL       +NAAL K  ER +  EVNNQILNALFTLMCLYQHPKRIYHL
Sbjct: 130 WIIGVAVSGAILFLVMTGMLNAALPKKSERDVWFEVNNQILNALFTLMCLYQHPKRIYHL 189

Query: 111 ILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHM-CVIILLNVNCFCTVCTLLSESWLQEVS 170
           ILLSRWK E +  L KLYCKDGTYKPHEWAHM  VIILLNVNCF       ++  L  ++
Sbjct: 190 ILLSRWKAEDVTKLRKLYCKDGTYKPHEWAHMLVVIILLNVNCF-------AQYALCGLN 249

Query: 171 ASTHRSRK-------CISDGNAAPAVAGVF 191
               R+R+       CIS   AAPA+AGV+
Sbjct: 250 LGYRRARRPAIGVGICISVAIAAPAIAGVY 272

BLAST of Bhi04G001859 vs. ExPASy TrEMBL
Match: A0A5D3BZC8 (PLAC8 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001450 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31
Identity = 87/150 (58.00%), Postives = 99/150 (66.00%), Query Frame = 0

Query: 51  WVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQHPKRIYHL 110
           W++     GAIL       +N  L K  ER +  EVNNQILNALFTLMCLYQHPKRIYHL
Sbjct: 127 WIIGVAVSGAILFLVMTGMLNGPLPKKSERDVWFEVNNQILNALFTLMCLYQHPKRIYHL 186

Query: 111 ILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHM-CVIILLNVNCFCTVCTLLSESWLQEVS 170
           ILLSRWKPE +  L KLYCKDGTYKPHEWAHM  VIILLNVNCF       ++  L  ++
Sbjct: 187 ILLSRWKPEDVTRLRKLYCKDGTYKPHEWAHMLVVIILLNVNCF-------AQYALCGLN 246

Query: 171 ASTHRSRK-------CISDGNAAPAVAGVF 191
               RS++       CIS   AAPAVAGV+
Sbjct: 247 LGYRRSQRPAIGVGICISVAIAAPAVAGVY 269

BLAST of Bhi04G001859 vs. ExPASy TrEMBL
Match: A0A1S3C4N4 (uncharacterized protein LOC103496598 OS=Cucumis melo OX=3656 GN=LOC103496598 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31
Identity = 87/150 (58.00%), Postives = 99/150 (66.00%), Query Frame = 0

Query: 51  WVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQHPKRIYHL 110
           W++     GAIL       +N  L K  ER +  EVNNQILNALFTLMCLYQHPKRIYHL
Sbjct: 127 WIIGVAVSGAILFLVMTGMLNGPLPKKSERDVWFEVNNQILNALFTLMCLYQHPKRIYHL 186

Query: 111 ILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHM-CVIILLNVNCFCTVCTLLSESWLQEVS 170
           ILLSRWKPE +  L KLYCKDGTYKPHEWAHM  VIILLNVNCF       ++  L  ++
Sbjct: 187 ILLSRWKPEDVTRLRKLYCKDGTYKPHEWAHMLVVIILLNVNCF-------AQYALCGLN 246

Query: 171 ASTHRSRK-------CISDGNAAPAVAGVF 191
               RS++       CIS   AAPAVAGV+
Sbjct: 247 LGYRRSQRPAIGVGICISVAIAAPAVAGVY 269

BLAST of Bhi04G001859 vs. ExPASy TrEMBL
Match: A0A0A0K7T1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G013870 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 87/150 (58.00%), Postives = 99/150 (66.00%), Query Frame = 0

Query: 51  WVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQHPKRIYHL 110
           W++     GAIL       +N  L K  ER +  EVNNQILNALFTLMCLYQHPKRIYHL
Sbjct: 127 WIIGVAVSGAILFLVMTGMLNGPLPKKSERDVWFEVNNQILNALFTLMCLYQHPKRIYHL 186

Query: 111 ILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHM-CVIILLNVNCFCTVCTLLSESWLQEVS 170
           ILLSRWKPE +  L KLYCKDGTYKPHEWAHM  VIILLNVNCF       ++  L  ++
Sbjct: 187 ILLSRWKPEDVSRLRKLYCKDGTYKPHEWAHMLVVIILLNVNCF-------AQYALCGLN 246

Query: 171 ASTHRSRK-------CISDGNAAPAVAGVF 191
               RS++       CIS   AAPAVAGV+
Sbjct: 247 LGYRRSQRPAIGVGICISVAIAAPAVAGVY 269

BLAST of Bhi04G001859 vs. ExPASy TrEMBL
Match: A0A6J1JPP6 (uncharacterized protein LOC111487772 OS=Cucurbita maxima OX=3661 GN=LOC111487772 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.1e-31
Identity = 84/143 (58.74%), Postives = 92/143 (64.34%), Query Frame = 0

Query: 51  WVLTCHFCGAIL-SCHDWDVNAALQKSPER-MLVEVNNQILNALFTLMCLYQHPKRIYHL 110
           W++     GAIL       +NAAL K  ER +  EVNNQILNALFTLMCLYQHPKRIYHL
Sbjct: 130 WIIGVAVSGAILFLVMTGMLNAALPKKSERDVWFEVNNQILNALFTLMCLYQHPKRIYHL 189

Query: 111 ILLSRWKPEMLLDLEKLYCKDGTYKPHEWAHM-CVIILLNVNCFCTVCTLLSESWLQEVS 170
           ILLSRWK E +  L KLYCKDGTYKPHEWAHM  VIILLNVNCF            +   
Sbjct: 190 ILLSRWKAEDVTKLRKLYCKDGTYKPHEWAHMLVVIILLNVNCFAQYALCGLNLGYRRAG 249

Query: 171 ASTHRSRKCISDGNAAPAVAGVF 191
                   CIS   AAPA+AGV+
Sbjct: 250 RPAIGVGICISVAIAAPAIAGVY 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G10980.13.4e-2949.33PLAC8 family protein [more]
AT5G05350.11.1e-2744.67PLAC8 family protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HJL97.4e-3258.00uncharacterized protein LOC111464682 OS=Cucurbita moschata OX=3662 GN=LOC1114646... [more]
A0A5D3BZC81.3e-3158.00PLAC8 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409... [more]
A0A1S3C4N41.3e-3158.00uncharacterized protein LOC103496598 OS=Cucumis melo OX=3656 GN=LOC103496598 PE=... [more]
A0A0A0K7T11.6e-3158.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G013870 PE=4 SV=1[more]
A0A6J1JPP62.1e-3158.74uncharacterized protein LOC111487772 OS=Cucurbita maxima OX=3661 GN=LOC111487772... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021369Protein of unknown function DUF2985PFAMPF11204DUF2985coord: 35..114
e-value: 1.8E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR31045:SF21SUBFAMILY NOT NAMEDcoord: 69..190
NoneNo IPR availablePANTHERPTHR31045PLAC8 FAMILY PROTEIN-RELATEDcoord: 69..190

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001859Bhi04M001859mRNA