Bhi04G001775 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001775
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr4: 60421603 .. 60423425 (+)
RNA-Seq ExpressionBhi04G001775
SyntenyBhi04G001775
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAATTGAACTCATTTTCCATCTGATTACTTCTTATCTACACCATGGGAGGCAGCCACAGGCAAAAAAAGACCCATTCTTCCTTCTCCATCTTTAGTTTTTTCAAATCCAAAAGAGGTAGAAAAGGAGATCTTTATGAGTATGGTAACAATTGGGAGGATGTACCAAGCACAAGTAAGGTGTGGCCAAGCGATGAGGACAAAGGTTACCGTTGGGTTGCCGAGCCCGGTATTGATAGAAAGGCCAAAGATTACATCGACAGGATTCATAGAAATCGTGTCTTTGAAACCGAGCGCCAAACAGTCACTATTCATCCCAATGGACATAAGTCCAACGTGTAAATAACTTATTTGTATTTTTTAATATTTTTTTTGTCTCTTGATATATATATATATATATATATATTTTACAATATGTGGGGTAGAGAATTATACCTCTTAATTCAAGATCATAGTACAAAATTTATGTTAATCGTGAGCTAAGCTCATTGTAACTTGTGTCTTTTGTAATCGACTTAAAAGTATTGTGATTCATTTCAAGTCTATCTAACTGTTTCATTAAATAACATTTATATATAATCTTAAGGTTTCTTTATATATATACAACATATAGTTAGCTCTAGTTTGTATATATATATGCATAATTGTTACATATATACCTATATATTGTATAAATATGTGTGTGGAAATATTTTCATTTTTCATATATTTTTGGTACATTTTTTTAATTAAAATACGACATTGCTTTATTGACGGTTTTTGTAGTCAATAATATAGCAACTTTCTTGACCATTTTTAGATATCATTAAAAACTGTTTAGTTGATAGCTAAAAAAGTTGTCACAACTTTGCAAAAATGAGAGCTTGCCAAAATTGATGGAAAGTTATAAAAATATCATCAACAAAAGAATTAACGTTGACGGTTTATTGTGCCAACTTAATATAAGATTTTATTGACAATTTATTGCTGTCAAGATAGATATATATACCTTTCATGCTTATCTTTAGTTATCGATTTCATAATAGTTAGCAATCATATTGTTATTTCACAGAAGAAATCTGATTTTGAGATTCTGAGTTGTTAGCCCACTGGGAATCATCTTAGGTTATTAACATAATTACTTTAAATATATTTTGAATAGATTAATCCTCACCATTCATGCTCAATTGCCAAAAATAAATAATATACCAGATTCCATTGATGATAGCTTACTAAGGCTTTCCTTAACTAAAACTTCGTATGCCTTTATTGGAATCTTTCTAGATGAGATTGAAGAAAGACTAAGTGCTTTAATTAACTAGAATGTAGATGCACGAAAAACCTTCTATCGTTTATCAAAAGTCTGCACGATCGTGTAGACGATGCACCAATAACTAAACGATAGGCCAATTAAGTAAACGATAGGAGGAAACGTTAAACGATCGTGTAGACGACAGTTAACTGAAGCTAGATGATCATATAGACGACAACTGAAGAGCTAAACGATCGTATAAATGATTGAGCGCAGAGCTAAACGATCGTGTACACGATGCGGTGGAAACTGTACAATCTTGTAAACGATACTTTAGCAAAATCTAAAAGATCGTAGAGGAAGAAGAAAAGATACAAGAGTTTAAGTGGTTCGGCCAAAGGCCTACGTCTACTGTGCAAATTGGGAGGTTCTCTTTTGTTACTCTTCAAAGTATTACAGAACGAAATGCCTTGCTCTCTTGATTACAATTCACTCTTACATTAATCTCTCGTTTGATTTCATTTACATATGTGCAGGCGATTCGGTCAACGATGATGAGCTCTGGTGGTACAACATTTAACAGAAAGAAGTCG

mRNA sequence

CACAATTGAACTCATTTTCCATCTGATTACTTCTTATCTACACCATGGGAGGCAGCCACAGGCAAAAAAAGACCCATTCTTCCTTCTCCATCTTTAGTTTTTTCAAATCCAAAAGAGGTAGAAAAGGAGATCTTTATGAGTATGGTAACAATTGGGAGGATGTACCAAGCACAAGTAAGGTGTGGCCAAGCGATGAGGACAAAGGTTACCGTTGGGTTGCCGAGCCCGGTATTGATAGAAAGGCCAAAGATTACATCGACAGGATTCATAGAAATCGTGTCTTTGAAACCGAGCGCCAAACAGTCACTATTCATCCCAATGGACATAAGTCCAACGTGCGATTCGGTCAACGATGATGAGCTCTGGTGGTACAACATTTAACAGAAAGAAGTCG

Coding sequence (CDS)

ATGGGAGGCAGCCACAGGCAAAAAAAGACCCATTCTTCCTTCTCCATCTTTAGTTTTTTCAAATCCAAAAGAGGTAGAAAAGGAGATCTTTATGAGTATGGTAACAATTGGGAGGATGTACCAAGCACAAGTAAGGTGTGGCCAAGCGATGAGGACAAAGGTTACCGTTGGGTTGCCGAGCCCGGTATTGATAGAAAGGCCAAAGATTACATCGACAGGATTCATAGAAATCGTGTCTTTGAAACCGAGCGCCAAACAGTCACTATTCATCCCAATGGACATAAGTCCAACGTGCGATTCGGTCAACGATGA

Protein sequence

MGGSHRQKKTHSSFSIFSFFKSKRGRKGDLYEYGNNWEDVPSTSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIHRNRVFETERQTVTIHPNGHKSNVRFGQR
Homology
BLAST of Bhi04G001775 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15
Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 1  MGGSHRQKKTHSS--FSIFSFFKSKRGRKGDLYEYGNNWEDVPSTSKVWPSDEDKGYRWV 60
          MGG +R   +HSS  FS+FSFFK++R  +    E   +W+D   T K   SDEDK Y WV
Sbjct: 1  MGGKNR---SHSSKRFSLFSFFKTRRSHR---VEADGSWDDFGYTRKAMASDEDKRY-WV 60

Query: 61 AEPGIDRKAKDYIDRIHRNRVFETERQTVT 89
          AEPGIDRKA  +I + H  RV E+ERQT++
Sbjct: 61 AEPGIDRKASAFIAKFHATRVSESERQTLS 83

BLAST of Bhi04G001775 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 5.9e-12
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 36 NWEDVPSTSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIHRNRVFETERQTV 88
          +W+DV  T K W SDEDK Y WVAEPGIDRKA  +I + H +RV E+ERQT+
Sbjct: 16 SWDDVIYTRKAWASDEDKRY-WVAEPGIDRKASAFIAKFHASRVSESERQTL 66

BLAST of Bhi04G001775 vs. TAIR 10
Match: AT1G48325.1 (Expressed protein )

HSP 1 Score: 40.8 bits (94), Expect = 7.7e-04
Identity = 27/87 (31.03%), Postives = 47/87 (54.02%), Query Frame = 0

Query: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDLYEYGNNWED---VPSTSKVWPSDEDKGYRW 60
          MGG  R++K+ SSFS+     ++  ++ D      NW +   +    ++  +D+D G  W
Sbjct: 3  MGGHGRRRKSSSSFSVVKSLFARCSKEKD------NWNEERMINVRPRIMTTDDD-GCSW 62

Query: 61 -VAEPGIDRKAKDYIDRIHRNRVFETE 84
           +AEP IDR+A  +I + H   + +TE
Sbjct: 63 TIAEPCIDRRATAFIAKFHETPIQDTE 82

BLAST of Bhi04G001775 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.3e-46
Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 0

Query: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDLYEYGNNWEDVPSTSKVWPSDEDKGYRWVAE 60
          MGGSHRQKKTHSSFSIFSFFKSKRGRKGD+YE+G NWEDVPS+SKVWPSDEDKGYRWVAE
Sbjct: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAE 60

Query: 61 PGIDRKAKDYIDRIHRNRVFETERQTVTIHPNGHKSNV 99
          PGIDRKAKDYIDRI++NRVFETERQTVTIHPNG  SNV
Sbjct: 61 PGIDRKAKDYIDRIYKNRVFETERQTVTIHPNGPNSNV 98

BLAST of Bhi04G001775 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.9e-35
Identity = 75/97 (77.32%), Postives = 86/97 (88.66%), Query Frame = 0

Query: 3  GSHRQKKTHSSFSIFSFFKSKRGRKGDLYEYGNNWED-VPSTSKVWPSDEDKGYRWVAEP 62
          G +RQKK+HSSFSIFSFFKSKRGRKGD Y++G  W D +P ++KVWPSDEDK + W+AEP
Sbjct: 2  GGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEP 61

Query: 63 GIDRKAKDYIDRIHRNRVFETERQTVTIHPNGHKSNV 99
          GIDRKAKDYIDRI+RNRVFE+ERQTVTI PNG KSNV
Sbjct: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

BLAST of Bhi04G001775 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.5e-35
Identity = 74/97 (76.29%), Postives = 87/97 (89.69%), Query Frame = 0

Query: 3  GSHRQKKTHSSFSIFSFFKSKRGRKGDLYEYGNNW-EDVPSTSKVWPSDEDKGYRWVAEP 62
          G +RQKK+HSSFSIFSFFKS+RGRKGD Y++G  W +++P ++KVWPSDEDK + WVAEP
Sbjct: 2  GGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAEP 61

Query: 63 GIDRKAKDYIDRIHRNRVFETERQTVTIHPNGHKSNV 99
          GIDRKAKDYIDRI+RNRVFE+ERQTVTI PNG KSNV
Sbjct: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

BLAST of Bhi04G001775 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.7e-33
Identity = 73/99 (73.74%), Postives = 87/99 (87.88%), Query Frame = 0

Query: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDLYEY-GNNWEDVPSTSKVWPSDEDKGYRWVA 60
          MGG++RQKK+HSSFSIFSFFKS+RGRKGD   + G+  +++P + KVWPSDEDK + WVA
Sbjct: 1  MGGNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIHRNRVFETERQTVTIHPNGHKSNV 99
          EPGIDRKAKDYIDRI+RNRVFE+ERQT+TI PNG KSNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

BLAST of Bhi04G001775 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.0e-33
Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 0

Query: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDLYEY-GNNWEDVPSTSKVWPSDEDKGYRWVA 60
          MGG++RQKK H+SFSIFSFFKS+RGRKGD   + G+  +++P + KVWPSDEDK + WVA
Sbjct: 1  MGGNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIHRNRVFETERQTVTIHPNGHKSNV 99
          EPGIDRKAKDYIDRI+RNRVFE+ERQTVTI PNG KSNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G05858.14.4e-1551.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G26620.15.9e-1261.54unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G48325.17.7e-0431.03Expressed protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K8W06.3e-4691.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1[more]
A0A0A0K7Y22.9e-3577.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1[more]
A0A0A0KBW16.5e-3576.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1[more]
A0A5A7SWT92.7e-3373.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KAK68.0e-3373.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33511OS06G0632400 PROTEINcoord: 1..88
NoneNo IPR availablePANTHERPTHR33511:SF17RIBOSOMAL PROTEIN S12coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001775Bhi04M001775mRNA