Bhi04G001727 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001727
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr4: 58692574 .. 58694368 (+)
RNA-Seq ExpressionBhi04G001727
SyntenyBhi04G001727
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATGAGTCACACAGAGACAGAGAGAGACCCTTGTCGGCAAAAACGAAAATTTAAGACACGATTTAAAAACTTTTCCAGAAAAAAATGGATTCAATTGAAAAGAGCAAGAAGCAGGTGGATGATGATGATGAAACTGATCTTCATTCTCACTGTCCTATCTTTTTAATTATCTGTGATTCAATCCTTCAAGCTTTCATCGCCATTTTGAGATTCTTAGGTTTTAATCACAATGGACCACCTTACCGTCCGGCGCCCTCCTCACCGGAAGATTGCTACACCGACGGCTCAGATCCGCCTTCCACGGCGGTCAACCCACCCGATGATGAATCTGTAAGCCTATTTCTCTCTCCCTCTTTTTTTTGGTTGTATTTGAATGTAAAAATAGTTCCCAATTTTTAAAGTAATTGTTTTGTCCTTTGAGAGAAATACATTTTTGATGTTTTGGATTTTATTGCCTATGATTTTCCGAGTTTTATTTTGATTTAGTCTCTAAATTATTTTTAAAAATGTTAGATTTAATCCTTTTAAAAGTACTTATTTTAGTGTCAAAATTTTGGTAAAACTTGAAAGAAAATGGGAGGCGATATGTATTTTTGGGTTTTAGATGTATTGAGTAAGATGAAGATCAAGGGGAAGGAAAATATCAAATATCAATGCCCCAAAATAGTGAACAATCAAAATCTTGAACCAAAAATGACTTTCGAGTCAACCCATAAAAATTCACTTTACCACCTTTATTCAAGATTGAAACTATAGATTTGTTAGTATGGTTAACTTATTTGGTAGCTTAATTATCTAAAAATACAAGTCATCGAACTATTTTGTTAAGAAGTTAACAAAAATTTAATAGTAGAGATCAAAGTAAGCATTTTCTAGAAGTTTGAGGACTAAAACAGACATTTTTAAAAGTTTAAGAATCAAAATAGAACAATATTCAAAGTTCAAGAAAAAAATAGGATTTAAACCTAAATTTTAAACTTTTAACCTTGACTTCCAACAAAATATTACCAATGGTCTTAGTGTTAAGTTTATTTGTTAATTTAAAATAAATATGAAATGAACTTTTAAAATTAATTTTAACGGTGGTGAAAAGATAGGAAAATTTAATTAATTTTAATTTTTTTAAATAATCAATATGTTAAAAGTAAATATTTAGTAAATAAATCAAGGTAAAAAGTATAAATCATGAAATCTAAATATCAATTAAATTTGAAGACTAATAATTTAATGTTCTGAAATTTATAAGCTAAATTGAAAATAAATTCAAAATTTTTTTAAAAAAATTAAAAAATGTATAAAATATAGAAAAATCTCAAATAGGTTTTTTTTTTTTTTTTTTTTAATAAAAGGGTGTGGTATCGTGAATATATATTCACTTTTTATGTACAAAATTTGACAAACTTTTCAGTACAATGACTTCATTGAAAATTTATAATTTTAAAGATTAAACTGTGAAAAATCAAAGAAATGGGGCATTTTTATTTCTTTCTTTATTTGAAAAGAAAAAAAAATAATCAATATTATTCGTTGTGTTGGGTTTTTGTAGGAGGAAGAAAGTGAGTACTACAGGCCGCATGTTCCTCCTCCGCCGCCGTGGAGCACCGGCGGCGGTGGTCAGACTGATTAAGATATTGTAATAATCAGCGGCGGCTGTTTTGTAAATCAAAGTAATGTTGTTCGAGATCTCTGTAGCTATGTGGTAATATCTATTACAGTGTATGAAGTAGCAAATAGAAAATTCCAAGCTTCGTAGTTATTTAGTCATTTAGTATTATAAATTTATTCTTTGAATT

mRNA sequence

TTTATGAGTCACACAGAGACAGAGAGAGACCCTTGTCGGCAAAAACGAAAATTTAAGACACGATTTAAAAACTTTTCCAGAAAAAAATGGATTCAATTGAAAAGAGCAAGAAGCAGGTGGATGATGATGATGAAACTGATCTTCATTCTCACTGTCCTATCTTTTTAATTATCTGTGATTCAATCCTTCAAGCTTTCATCGCCATTTTGAGATTCTTAGGTTTTAATCACAATGGACCACCTTACCGTCCGGCGCCCTCCTCACCGGAAGATTGCTACACCGACGGCTCAGATCCGCCTTCCACGGCGGTCAACCCACCCGATGATGAATCTGAGGAAGAAAGTGAGTACTACAGGCCGCATGTTCCTCCTCCGCCGCCGTGGAGCACCGGCGGCGGTGGTCAGACTGATTAAGATATTGTAATAATCAGCGGCGGCTGTTTTGTAAATCAAAGTAATGTTGTTCGAGATCTCTGTAGCTATGTGGTAATATCTATTACAGTGTATGAAGTAGCAAATAGAAAATTCCAAGCTTCGTAGTTATTTAGTCATTTAGTATTATAAATTTATTCTTTGAATT

Coding sequence (CDS)

ATGGATTCAATTGAAAAGAGCAAGAAGCAGGTGGATGATGATGATGAAACTGATCTTCATTCTCACTGTCCTATCTTTTTAATTATCTGTGATTCAATCCTTCAAGCTTTCATCGCCATTTTGAGATTCTTAGGTTTTAATCACAATGGACCACCTTACCGTCCGGCGCCCTCCTCACCGGAAGATTGCTACACCGACGGCTCAGATCCGCCTTCCACGGCGGTCAACCCACCCGATGATGAATCTGAGGAAGAAAGTGAGTACTACAGGCCGCATGTTCCTCCTCCGCCGCCGTGGAGCACCGGCGGCGGTGGTCAGACTGATTAA

Protein sequence

MDSIEKSKKQVDDDDETDLHSHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSSPEDCYTDGSDPPSTAVNPPDDESEEESEYYRPHVPPPPPWSTGGGGQTD
Homology
[Close]
BLAST of Bhi04G001727 vs. ExPASy TrEMBL
Match: A0A5D3D4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00380 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 83/107 (77.57%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 2   DSIEKSKKQVDDDDETDLH--SHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSS 61
           DS EKSKKQ   D+E+DLH   HC I L I DSILQAFIAILRF GF  N PPYRPA SS
Sbjct: 3   DSTEKSKKQA--DNESDLHPIPHCSIILTIFDSILQAFIAILRFFGFKRNAPPYRPASSS 62

Query: 62  PEDCYTDGSDPPSTAVNPPDDESEEESEYYRPHVPPPPPWSTGGGGQ 107
            EDCYT GS+PPSTAV+PP D+SEEESEYYRPHVPPPPPWSTGGGGQ
Sbjct: 63  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPPPPWSTGGGGQ 107

[Close]
BLAST of Bhi04G001727 vs. ExPASy TrEMBL
Match: A0A1S3CLD8 (uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 83/107 (77.57%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 2   DSIEKSKKQVDDDDETDLH--SHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSS 61
           DS EKSKKQ   D+E+DLH   HC I L I DSILQAFIAILRF GF  N PPYRPA SS
Sbjct: 42  DSTEKSKKQA--DNESDLHPIPHCSIILTIFDSILQAFIAILRFFGFKRNAPPYRPASSS 101

Query: 62  PEDCYTDGSDPPSTAVNPPDDESEEESEYYRPHVPPPPPWSTGGGGQ 107
            EDCYT GS+PPSTAV+PP D+SEEESEYYRPHVPPPPPWSTGGGGQ
Sbjct: 102 LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPPPPWSTGGGGQ 146

[Close]
BLAST of Bhi04G001727 vs. ExPASy TrEMBL
Match: A0A0A0KBZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020160 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.6e-34
Identity = 80/108 (74.07%), Postives = 87/108 (80.56%), Query Frame = 0 

Query: 3   SIEKSKKQVDDDDETDLH--SHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSSP 62
           S EKSKKQ  DD+E+DLH   HC I L I DSILQ FI+ILRF GF  + PPYRPA SS 
Sbjct: 4   STEKSKKQ--DDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASSSL 63

Query: 63  EDCYTDGSDPPSTAVNPPDDESEEESEYYRPHVPPPPPWSTGGGGQTD 109
           EDCYT GS+PPSTAV+PP D+SEEESEYYRPHVPP PPWSTGGGGQ D
Sbjct: 64  EDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID 109

[Close]
BLAST of Bhi04G001727 vs. ExPASy TrEMBL
Match: A0A5A7T6U0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00390 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.7e-12
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0 

Query: 1   MDSIEKSKKQVDDDDETDLHSHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSSP 60
           ++ IE S +   + ++  +H HCP FL I + + Q  +A  RFLGF      +RP  SS 
Sbjct: 11  IEEIENSNENTKELNDDVVHDHCPFFLSIFNLVFQITMAFYRFLGFR----VHRPILSSS 70

Query: 61  EDCYTDGSDPPSTAVNPP-DDESEEESEYYRPHVPPPPPWSTGGGGQTD 109
           ED Y   S PP T V+PP +D  EEE E+ R + PPPPP S GGGG+T+
Sbjct: 71  EDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPSNGGGGRTN 115

[Close]
BLAST of Bhi04G001727 vs. ExPASy TrEMBL
Match: A0A1S3CMT1 (uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.7e-12
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0 

Query: 1   MDSIEKSKKQVDDDDETDLHSHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSSP 60
           ++ IE S +   + ++  +H HCP FL I + + Q  +A  RFLGF      +RP  SS 
Sbjct: 11  IEEIENSNENTKELNDDVVHDHCPFFLSIFNLVFQITMAFYRFLGFR----VHRPILSSS 70

Query: 61  EDCYTDGSDPPSTAVNPP-DDESEEESEYYRPHVPPPPPWSTGGGGQTD 109
           ED Y   S PP T V+PP +D  EEE E+ R + PPPPP S GGGG+T+
Sbjct: 71  EDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPSNGGGGRTN 115

The following BLAST results are available for this feature:
BLAST of Bhi04G001727 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G001727 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G001727 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D4J41.1e-3577.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CLD81.1e-3577.57uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=... [more]
A0A0A0KBZ47.6e-3474.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020160 PE=4 SV=1[more]
A0A5A7T6U03.7e-1244.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CMT13.7e-1244.04uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001727Bhi04M001727mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane