Bhi04G000857 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G000857
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	selenoprotein H
Location	chr4: 26419428 .. 26424290 (+)
RNA-Seq Expression	Bhi04G000857
Synteny	Bhi04G000857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACGTGACAATAAATGGTGGTGGAGTCTGGACTGGCGCCATTTCTTGGGACTTCGTGCCGCCACTTTCTTCCACAGAAGAAACCAAGTGGATCTGTGTGGGCGTCGTACGATCACCCAGTTGACGGCCACGATCCATCCTCACACTCCCAATCCATCTCCACCGTCTCTTCAAAATCCAACCGCCGTCCCAGAGCGCGGGAAAAGGCCCCAACCCAGCCTCTGTATATCACTCGAAGTCGAACAGTTCGAAGCCGATAAGTTCACTTTCTTCCTCAAAGTAGTTCTTTCTTTTCCTTTCTAGGGTTTCAGGTCTGTTTTAATGGCGCCCAGGAAGCGAAGCAAGAACCAAGAAGACGAGCCGGCGGCGGAGAAGCTGGCCCCGGCGTCTTCGAGGGTGACTCGGAGCTCGGCTCGGCTGGCGGCGAACTCTAAGGCTGATTCGGCGGTGGATGAGGCTGTGACTGAGTCGGCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGCAAGGTGAAAGAGGTTGAAAATGAAGGGGTGGAAGTTGATGCTGCTTTGGAGAAACTTGACAAGGATGGGAAGAACAGAACGGTTGTGATTGAACATTGGTGAGTTTTTCTTTCCCACTCGTTCAGAAATCGGTGAAGAATTGAAAATATGTTAGTTAAGTTGAAGATGAAGTTTCAAGGGCTTGAGATGCTTGATTGATTGCTTTCTTGTTTGATCTTCGTCGTAAATTTTAGTACCATTTGTGAGCTTTTTGTTAGGTTAGTTTTTTTCCCCATGAAACGCGGACTACATTTCTAGGGTTTCGAAGAATAAAGGTTTTGACTTACTTTGTATAGTTTTGGTGCTGTTCTACCGCCTGCGCCTCCTATGGCTTCTTGTCCTTCCTTTACCACTGCCATTTTCTCTCCTCCTATTGCCGTTTGCCCATCTTTTCAGATTCCTCCATGAAAACTAACATGTCAATATCGAGTTGTGCAATCGCATTTGATGTATTTTGTTGAGGGAATTTTTGCTCACTCACATCTTTGATAATTTATTTTTGTTGGCATTGGACAGCGTACTTTCTCTTCCGGGCATGGCTAGAAAATTTCATTTGAAGAAAGCTAACTTTTTATAGATATTATCTTTGAACTCTAATAAAGTGAGGCAAATTAGAGGGGGAAAACATGGTTTTTTTTTGCTCTATAGAAAGTCAAGACAAGTGAGGGACCATTTCCTCTCTTTACTCTTGGCTTCGCGTTTGCTTTTGGCAATGTGACGTCTAATGAATGGAAATGAAAAGGATAATACGAATGTGGCGTTTCATGGTTGTGGAAATTTTCCCATAAGTGGATGCTTCTGTCTTTGCCATGTCATGTGCGGTGTTTGTTATGACACTTTTTCCCGTAATTTTGTTCCCTTGTAGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATCCAGGTGCAAAATGGTCTGGAGAATGGTGTTCCTGGAATCACTGTGATGCTTAACCCTGATACGGTATCTTTCTGACATAATCAACTCTTACATCCTATTCTTCATAAAAAAGAATCAATTTGGGTTCTTCATTTTGTTATCCAAGCAAAATAATACTCCACATGATACTGGTCTGTTGATTTGATTGTCCTTTGAATTTGTTCTTTATTTTCCTTCTATTTTGAGGAAGGTGGAGGTTTTTAGCTTCCAAATTCCAACCATTTCTACTTTGAAAAACCAAAAAATGCGATATTTGTTATTTTAAAGCTCATATGTTCTCTGCTGGGTAGGGTCACAGTGAAACTATGAAAACACCCTATGGTTCTGTTAGATGATACAATACTAAATTTGCCTTCACTTATCAGCTTATGTTAACTTGTTGATTGACCCTAAAGCTTAAGCTGATGGGTGAATACAAATTTAAGATTATATCATCTAAAAAGAGTTTTCAAAGAGTTGCCTATGTCTTTGATGTTATGGTTTTCTGATGCCCAAAAGATGGAAAACTTGAGTTTGATTGATTTATTTATTTTTTGCTCGGAAAGTATCAAAGCTAATCTCCATATTTCATGATTGGATTGTTAGTATTAGGTATTTGAAACGAGGTAAACTAATGTTGGGGAGGATTTAGTTCTAAACTCTATGGTGACCATTTACTTAACAATTTATATTGACAAAATCTCACATTGATTAAGAAAGGAAATAATTATGAGTACATAAGTAGGAGACAATATCTCCATTATTGCTAGGCTTTTTGTTAGTGTTGGTTTCGTTGCTTTGGTGAAGAGAAGTTAGCTTGGTTAAAGGTGTCGAGAGTAAACACAGATCAATGACTATTTGGAGGGAGGCTTGCTGGTCCTTTAAAGGGGCAAATTGTTGGGCATGTGACTAAAGTCTCACATTAACTAGAAAAAGAGAAGATTAAGGGTACATAAGTGGGAGACAATATCTTCACTAGTGTATGAAGTCTCTTGGGTGATTCTATAAACAAACTGAGGTCTTATGTCCGAAGTGGACAATATCCTACTGTGGAGATATTATGATCCTCTGAGTTTCTTTAGATAATCAATAGTTGTATTTATGATCAATCACCTTTGATTACCTGATTGGATTTTAGAATTTCTCCATTTTATTTTAAGGAACTGCTACATATCACTGAAATTTCGTGCAGAAAATTGAAAACTAAAAATTAAATAGTGATTATGTTCATTCAATGAAATTGTTGTTTTTCCTCCTCATTTTATTATTTATTTTTTTAATATGCAGCCAAGAAGGGGTTGCTTTGAAATCCGGAGTGAAGATGGCGAGAAGTTTATCAGTCTTCTGGTAATTATCACCATTAACTTCAATTATAAAAAAAATTAATTTATGATTAATTTCCGGTTATCTTGACATTTGCTAAATATTCAAACACAACAATTTAGGGTCTAGTTACTGATAGGCAAGAATGCCTTTACTCTTTAGTTAAATTGGAAGAAAAAAGTTCTCTTATTTGGTGCTAAATTTAGAACCTTTTTTTTTAAACAAAATAATCTATACTATCTTTTTTGGGTTCATCTTGGTCTGTATTCTTTTTCTTAATTATTCTATTTCTTTTCTCTAGGCTTGCTCTGTTTTTTCCTAGCCAATTGGAGTAATTTTTCCTAAGCTCATAGGCCTTTTGAGTGGTTTTATATCCAATCTCTCTTCCTTACGTTAATCCTTCTATTTAATTGTACTTGTGTTCTCCATAAAATTTCCCTCAATTCAATTTGATGACTAGTGTTAATGAATTTTTATTCAGTCCACCGAAGTTACATGATGAAATGAGTTTGCTAAGCATTTTACCGTAAGTATTTCTTGGTGAAATATGATATTGTTGGCTAATAAAGCAATGTTTAGAATTTTGTTTGATATTTCAAATATTGTTTTAAATATTATAGTACGATTATATTTATTTTTGGATTAACAACTAATATTAAAACTGAATTAATTTATCTTTTGGTATAACATGCGAGGGCGATGATTTGAACTTCTAACTTTGAGACAGTAGTAGATTTTGAGACAGTAGTAGATGCCCTTCAACTGCTCATATTAGCTTGAAATCTAGGCTAGAACTTTTCCATACCAATTAGGTGTAAAGATTCCTCGATCTGATGCCCTTAGGTTGATTCTCGTCATTCATTCTAAACTCTTTCCGGGTTGACCGTCTTCCTGTTGAAGGCAAATATCTCTTTTATTTGGGTTAGATCAGCAACGGATGTCTTGTATTGAGGGGTACTAGTGGCACCTACAGATCCTTGTTTGAATTCTGTTTTTCATATCTCCTTTTTTTTAATGTGCCTAAGATTATTTGTTGCTTTTTACACCCAAGAGATTCCTCAACGCTTTTACATCTTTTGATTATGAGTTGGTAATCTGTCAAGCTATCAAGTTTTGTCTGTTTAATTTGACAAGTTCACTCATAACTTCATTGCAATTATACACTTAAGATGATCGATAAAGCTGTCATATAACATTGTACGTTTCATTTATAGGACATGAAGCGACCTTTTACTCGCATGAAGGAACTGGACATGGAAGAAGTCATTTCAGACATCATTGAGAAGATAAAAGGATGATGATGGCCTTTGATGAAAAATTGCCTTCTAGGATGCAATGGTTTTTTTGTGGTGGTTTGAAGCTGACCAGTCAGAGAAGCTTTGATGGTGGAAACTTAGCTAATGTTCATTTGCCAATGCGAATATTGCCTACTCACTTGGCATGACTGCAATGGTAAAGCATCAGGTTTGAACAAACAAGATGGATTATTTTTTGGTTTAAGCTTCAAAATGAACGAGTCATCTTTGAAGAGGGTTGTCCTTTGTATTAGTAGCAGAAACCTACTCTTACTTCTAAGAGGGTGGCTCTATATTGCATCCTTGAATTGTGTATTTTTGTATGAATCAATGGAGTTTTATTTGCATCTATGTTTTTTAGGACAATTTACAAACCAGAAAACTAGGAGGGAGATTCCTTCAGCGAATCTATGCCCCTATTGCAAAATTAGGATTAGAGGTGATCATTGGTTGGTTGGTGTTGGTATGTCAACCACCAATTTGGCTATTTTGATCAATTGATGGCTGTTGATTTTGGGTGGATCTACAGAACCAACCGGTTGGCCACATGAATGGTCGATTAGGGGTTGGTTTTACTCGGTTTTAGAAGGAAACATCGGTGGAGTTGTTGAGAAGACGAAAAACTAGTTTATGTTGGTGTTGGGCTCTGACGAAGAGAGTGAGCTTTGATTGAAGAAAAAAAGACTAGAGTAGAGGAAAAAGAGGAGCTACAATAGAGGCATGCTTGTGGTGCGATGGTGATGGTTGGTGATGGCAGGACTTTGAAAGGAAACAGA

mRNA sequence

CGACGTGACAATAAATGGTGGTGGAGTCTGGACTGGCGCCATTTCTTGGGACTTCGTGCCGCCACTTTCTTCCACAGAAGAAACCAAGTGGATCTGTGTGGGCGTCGTACGATCACCCAGTTGACGGCCACGATCCATCCTCACACTCCCAATCCATCTCCACCGTCTCTTCAAAATCCAACCGCCGTCCCAGAGCGCGGGAAAAGGCCCCAACCCAGCCTCTGTATATCACTCGAAGTCGAACAGTTCGAAGCCGATAAGTTCACTTTCTTCCTCAAAGTAGTTCTTTCTTTTCCTTTCTAGGGTTTCAGGTCTGTTTTAATGGCGCCCAGGAAGCGAAGCAAGAACCAAGAAGACGAGCCGGCGGCGGAGAAGCTGGCCCCGGCGTCTTCGAGGGTGACTCGGAGCTCGGCTCGGCTGGCGGCGAACTCTAAGGCTGATTCGGCGGTGGATGAGGCTGTGACTGAGTCGGCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGCAAGGTGAAAGAGGTTGAAAATGAAGGGGTGGAAGTTGATGCTGCTTTGGAGAAACTTGACAAGGATGGGAAGAACAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATCCAGGTGCAAAATGGTCTGGAGAATGGTGTTCCTGGAATCACTGTGATGCTTAACCCTGATACGCCAAGAAGGGGTTGCTTTGAAATCCGGAGTGAAGATGGCGAGAAGTTTATCAGTCTTCTGGACATGAAGCGACCTTTTACTCGCATGAAGGAACTGGACATGGAAGAAGTCATTTCAGACATCATTGAGAAGATAAAAGGATGATGATGGCCTTTGATGAAAAATTGCCTTCTAGGATGCAATGGTTTTTTTGTGGTGGTTTGAAGCTGACCAGTCAGAGAAGCTTTGATGGTGGAAACTTAGCTAATGTTCATTTGCCAATGCGAATATTGCCTACTCACTTGGCATGACTGCAATGGTAAAGCATCAGGTTTGAACAAACAAGATGGATTATTTTTTGGTTTAAGCTTCAAAATGAACGAGTCATCTTTGAAGAGGGTTGTCCTTTGTATTAGTAGCAGAAACCTACTCTTACTTCTAAGAGGGTGGCTCTATATTGCATCCTTGAATTGTGTATTTTTGTATGAATCAATGGAGTTTTATTTGCATCTATGTTTTTTAGGACAATTTACAAACCAGAAAACTAGGAGGGAGATTCCTTCAGCGAATCTATGCCCCTATTGCAAAATTAGGATTAGAGGTGATCATTGGTTGGTTGGTGTTGGTATGTCAACCACCAATTTGGCTATTTTGATCAATTGATGGCTGTTGATTTTGGGTGGATCTACAGAACCAACCGGTTGGCCACATGAATGGTCGATTAGGGGTTGGTTTTACTCGGTTTTAGAAGGAAACATCGGTGGAGTTGTTGAGAAGACGAAAAACTAGTTTATGTTGGTGTTGGGCTCTGACGAAGAGAGTGAGCTTTGATTGAAGAAAAAAAGACTAGAGTAGAGGAAAAAGAGGAGCTACAATAGAGGCATGCTTGTGGTGCGATGGTGATGGTTGGTGATGGCAGGACTTTGAAAGGAAACAGA

Coding sequence (CDS)

ATGGCGCCCAGGAAGCGAAGCAAGAACCAAGAAGACGAGCCGGCGGCGGAGAAGCTGGCCCCGGCGTCTTCGAGGGTGACTCGGAGCTCGGCTCGGCTGGCGGCGAACTCTAAGGCTGATTCGGCGGTGGATGAGGCTGTGACTGAGTCGGCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGCAAGGTGAAAGAGGTTGAAAATGAAGGGGTGGAAGTTGATGCTGCTTTGGAGAAACTTGACAAGGATGGGAAGAACAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATCCAGGTGCAAAATGGTCTGGAGAATGGTGTTCCTGGAATCACTGTGATGCTTAACCCTGATACGCCAAGAAGGGGTTGCTTTGAAATCCGGAGTGAAGATGGCGAGAAGTTTATCAGTCTTCTGGACATGAAGCGACCTTTTACTCGCATGAAGGAACTGGACATGGAAGAAGTCATTTCAGACATCATTGAGAAGATAAAAGGATGA

Protein sequence

MAPRKRSKNQEDEPAAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAPKENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPGITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

Homology

[Close]

BLAST of Bhi04G000857 vs. TAIR 10
Match: AT4G31360.1 (selenium binding )

HSP 1 Score: 141.0 bits (354), Expect = 9.3e-34
Identity = 92/185 (49.73%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 3   PRKRSKNQEDEPAAEKLAPASSRVTR---SSARLAANSKADSAVDEAVTESAKSKKAKRA 62
           P K+SK   +E A      ASSRVTR   S  R         A   A   + K  K K +
Sbjct: 2   PPKKSKADGEEKAKPLTTLASSRVTRSMDSRTRSQTQQNGAKAAGSATKPATKKAKRKNS 61

Query: 63  PKENGKVK------EVE--NEGVEVDAALEKLDKDGKNRT-VVIEHCKQCQSFKKRAIQV 122
             E G+ K      EVE   E VE +   E+ + +   RT +VIEHCKQC +FK RAIQV
Sbjct: 62  AIETGRAKKGKKEEEVEEPEEAVEEEVEKEEPEVEDPTRTKIVIEHCKQCNAFKTRAIQV 121

Query: 123 QNGLENGVPGITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDI 176
           +  LE  VPG+TV LNP+ PRRGCFEIR E G+ FISLL+MKRPF  MK LDMEEVI DI
Sbjct: 122 KEALEGAVPGVTVSLNPEKPRRGCFEIREEGGQTFISLLEMKRPFAPMKALDMEEVIEDI 181

[Close]

BLAST of Bhi04G000857 vs. TAIR 10
Match: AT2G24440.1 (selenium binding )

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33
Identity = 85/168 (50.60%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 15  AAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAPKENGKVK------E 74
           A  ++  +  R TRS  +   +S     ++    +  K+ KAK       KVK      +
Sbjct: 16  ANTRMLRSMDRKTRSDTKRDGSSSKLMKIESPEKKKRKTTKAKNVGAAKKKVKKEEVAVK 75

Query: 75  VENEGVEVDAALEK-LDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPGITVMLNP 134
           +E E  E D A EK  D D   + +VIEHCKQC+SFK+RA +V+ GLE  VPGI V +NP
Sbjct: 76  IEKEEEEDDDAAEKEEDDDSDKKKIVIEHCKQCKSFKERANEVKEGLEEAVPGIIVTVNP 135

Query: 135 DTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK 176
           D PRRGCFEIR E GE FISLL MKRPFT MKEL+MEEVI+DI+EKIK
Sbjct: 136 DKPRRGCFEIREEGGETFISLLAMKRPFTPMKELNMEEVIADIVEKIK 183

[Close]

BLAST of Bhi04G000857 vs. ExPASy Swiss-Prot
Match: Q3UQA7 (Selenoprotein H OS=Mus musculus OX=10090 GN=Selenoh PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 8.0e-06
Identity = 28/94 (29.79%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 80  LEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPGITVMLNPDTPRRGCFEI-- 139
           ++K +K  +  TVVIEHC   + + + A  +   L+   P + V +NP  PRRG FE+  
Sbjct: 18  VDKREKLAEGATVVIEHCTSXRVYGRHAAALSQALQLEAPELPVQVNPSKPRRGSFEVTL 77

Query: 140 -RSEDGEKFISLLDMKRPFTRMKELDMEEVISDI 171
            RS++    +     K P  ++K  + +EV+ ++
Sbjct: 78  LRSDNSRVELWTGIKKGPPRKLKFPEPQEVVEEL 111

[Close]

BLAST of Bhi04G000857 vs. ExPASy Swiss-Prot
Match: Q8IZQ5 (Selenoprotein H OS=Homo sapiens OX=9606 GN=SELENOH PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 64  GKVKEVENEGVEVDAALEKLDKDG---KNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPG 123
           G+ ++ E   V V    EKL   G   +  TVVIEHC   + + + A  +   L    P 
Sbjct: 5   GRKRKAEAAVVAVAEKREKLANGGEGMEEATVVIEHCTSXRVYGRNAAALSQALRLEAPE 64

Query: 124 ITVMLNPDTPRRGCFEIR--SEDGEKFISLLDMKR-PFTRMKELDMEEVISDI 171
           + V +NP  PRRG FE+     DG        +K+ P  ++K  + +EV+ ++
Sbjct: 65  LPVKVNPTKPRRGSFEVTLLRPDGSSAELWTGIKKGPPRKLKFPEPQEVVEEL 117

[Close]

BLAST of Bhi04G000857 vs. ExPASy TrEMBL
Match: A0A1S3BBW1 (selenoprotein H OS=Cucumis melo OX=3656 GN=LOC103488240 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 149/176 (84.66%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MAPRKRSKNQEDEPAAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAP 60
           MAPRKRSKNQE+E A EK APA+SRVTRSSARLAANSKAD      VTE  KSKKAKRAP
Sbjct: 1   MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADL----TVTELPKSKKAKRAP 60

Query: 61  KENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPG 120
           KENGKV+EVEN+ V+VD  LEK DKD K+RTVVIEHCKQCQSFKKRAIQVQ GLENGVPG
Sbjct: 61  KENGKVEEVENKEVKVDVGLEKPDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPG 120

Query: 121 ITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 177
           ITV+LNPD PRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Sbjct: 121 ITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 172

[Close]

BLAST of Bhi04G000857 vs. ExPASy TrEMBL
Match: A0A0A0LPC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379100 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.7e-68
Identity = 145/176 (82.39%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MAPRKRSKNQEDEPAAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAP 60
           MAPRKR+KNQE++   EK APA+SR+TRSSARLAANSKAD      VTE  KSKKAKRAP
Sbjct: 1   MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADL----TVTELPKSKKAKRAP 60

Query: 61  KENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPG 120
           KENGKV+EVEN+ V+VD  L KLDKD K+RTVVIEHCKQCQSFKKRAIQVQ GLENGVPG
Sbjct: 61  KENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPG 120

Query: 121 ITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 177
           ITV+LNPD PRRGCFEIRSEDGEKFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Sbjct: 121 ITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 172

[Close]

BLAST of Bhi04G000857 vs. ExPASy TrEMBL
Match: A0A6J1K9R2 (selenoprotein H-like OS=Cucurbita maxima OX=3661 GN=LOC111492377 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.0e-67
Identity = 145/179 (81.01%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MAPRKRSKNQEDEPAA---EKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAK 60
           MAPRKRSKNQED+PAA   EK AP SS VTR S RLA NS AD  V+EAVTE  KSKK K
Sbjct: 1   MAPRKRSKNQEDKPAAAAEEKPAPVSSMVTRRSPRLAVNSMADLVVEEAVTELPKSKKVK 60

Query: 61  RAPKENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENG 120
           RAPKENGK KEV NEG E+DAA +KL KD KNRTVVIE CKQCQSFKKRAIQVQ+GLENG
Sbjct: 61  RAPKENGKAKEVGNEGEEIDAASKKLSKDAKNRTVVIEFCKQCQSFKKRAIQVQSGLENG 120

Query: 121 VPGITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 177
           V GITV+LNP+ PR+GCFEIRS+DGEKFISLLDMKRPFTRMKEL+MEEVISDIIEKIKG
Sbjct: 121 VSGITVLLNPNKPRKGCFEIRSDDGEKFISLLDMKRPFTRMKELNMEEVISDIIEKIKG 179

[Close]

BLAST of Bhi04G000857 vs. ExPASy TrEMBL
Match: A0A6J1GHF7 (selenoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453972 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.2e-66
Identity = 140/176 (79.55%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MAPRKRSKNQEDEPAAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAP 60
           MAP+KRSK QEDE A  K  PASSRVTR S RLA NSKAD  V+E V +  K KKAKR P
Sbjct: 1   MAPKKRSKIQEDETAVAKPVPASSRVTRRSPRLAGNSKADLTVEETVVKLPKRKKAKRGP 60

Query: 61  KENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPG 120
           KENGK +EVENEG ++DAA EKL  + KNR VVIEHCKQCQSFKKRA++VQNGLE GVPG
Sbjct: 61  KENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRAMEVQNGLEKGVPG 120

Query: 121 ITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 177
           ITV+LNPD PRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
Sbjct: 121 ITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 176

[Close]

BLAST of Bhi04G000857 vs. ExPASy TrEMBL
Match: A0A6J1KP64 (selenoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496337 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.9e-65
Identity = 139/176 (78.98%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MAPRKRSKNQEDEPAAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAKRAP 60
           MAP+KRSK QEDE AA K  P SSRVTR S RLAANSKAD  V+E V +  K KKAKRAP
Sbjct: 1   MAPKKRSKIQEDETAAAKPVPVSSRVTRRSPRLAANSKADLTVEEPVVKLPKKKKAKRAP 60

Query: 61  KENGKVKEVENEGVEVDAALEKLDKDGKNRTVVIEHCKQCQSFKKRAIQVQNGLENGVPG 120
           KEN K +EVENEG ++DAA EKL  + KNR VVIEHCKQCQSFKKRA++VQNGLE GVPG
Sbjct: 61  KENEKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRAMEVQNGLEKGVPG 120

Query: 121 ITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG 177
           ITV+LNPD  RRGCFEIRSEDGEKFISLLDMKRPFT+MKELDMEEVISDIIEKIKG
Sbjct: 121 ITVLLNPDKSRRGCFEIRSEDGEKFISLLDMKRPFTQMKELDMEEVISDIIEKIKG 176

The following BLAST results are available for this feature:

BLAST of Bhi04G000857 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31360.1	9.3e-34	49.73	selenium binding	[more]
AT2G24440.1	2.1e-33	50.60	selenium binding	[more]

BLAST of Bhi04G000857 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3UQA7	8.0e-06	29.79	Selenoprotein H OS=Mus musculus OX=10090 GN=Selenoh PE=1 SV=2	[more]
Q8IZQ5	1.5e-04	30.09	Selenoprotein H OS=Homo sapiens OX=9606 GN=SELENOH PE=1 SV=2	[more]

BLAST of Bhi04G000857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBW1	1.4e-69	84.66	selenoprotein H OS=Cucumis melo OX=3656 GN=LOC103488240 PE=4 SV=1	[more]
A0A0A0LPC9	7.7e-68	82.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379100 PE=4 SV=1	[more]
A0A6J1K9R2	5.0e-67	81.01	selenoprotein H-like OS=Cucurbita maxima OX=3661 GN=LOC111492377 PE=4 SV=1	[more]
A0A6J1GHF7	3.2e-66	79.55	selenoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453972 PE...	[more]
A0A6J1KP64	7.9e-65	78.98	selenoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496337 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..86
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 87..166 e-value: 1.9E-6 score: 29.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR33638	SELENOPROTEIN H	coord: 1..175
IPR011893	Selenoprotein, Rdx-type	PFAM	PF10262	Rdx	coord: 91..139 e-value: 1.1E-4 score: 22.3
IPR011893	Selenoprotein, Rdx-type	TIGRFAM	TIGR02174	TIGR02174	coord: 92..143 e-value: 3.7E-9 score: 34.7
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 91..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000857	Bhi04M000857	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus