Bhi04G000745 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000745
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionpentatricopeptide repeat-containing protein At4g21065-like
Locationchr4: 22981515 .. 22985221 (-)
RNA-Seq ExpressionBhi04G000745
SyntenyBhi04G000745
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTCTTCCCCTCTCAAAATCCCACCATTATTAAGTAATCTCTAAATTCCTTTTCCCTTCTTCCTTCCATGGCTTCCTTCCCTTCTGTTACTCTCACTGCTTCTCTCAAGCTCGAACCTGACTCAAGAAAGCGACATTACACCAGCTTTCCCCTCAACGATAAGGTACACTCTTTTTTTTGCCTTGTAATCTTCAGTGATTCCAAAATTCTCTGTGCGATGAACCTCAAAATCATCCTCTTCTCCTCTTAGAACCCTGGAATTAAACTTACGAACTTCTTCTTCTTTTGGTTTGAGAGCTAGATCAGTTCACTCGAACTGTGAAACACTGAGCTTAATTTGTTCGTACAGTGTGAATTCATCCCGCTTCCGTTTTCTTGATCTTTGTTGATTTTCTATGATATCCTGCAGAGTTTGCCGTATCAGAAAAATCATTCACTAATCCAATTGAATGTTGATGCGGAGTCGAAGTTTGTAGATCTTCGGGAAGCTCTGTCGCTGTTAAAAGATGGTACGAGAATTGAAACTTCTTACTATATTCCATTATTGCAAGAATGTATAGATGGGAATTTAGCTGCAGAAGCGGAAATTATCCATGGGCATGTCGTAAAAACTGGAACTCATGAAGACTTATTTGTAATGACTTTTCTTGTTAACGTTTATGCGAAATGCGGAGTCATGGAAATTGCTCGCAAAGTGTTTGATAATTTGCCTAGAAGAAATGTCATTGCATGGACAACTCTAGTGACTGGTTATGTTCAGAATTCACAGCCTTTGGTTGCTTTTCAAGTGTTCATAGAAATGTTGGAAGCTGGAGCTTATCCTACAAACTATACGCTCGGAATCGTGTTGAATGCTTGTTGTTCCTTGCATTCTATCGAATTCGGGAAGCAGGTTCATGCATATATCATCAAATATCATATAGATTTCGACACTAGTATTGGCAACTCTCTTTCCAACTTTTACTCTAAGTCTGGGAGCTTGGAATTTGCAATTAGAGCCTTCAAGAAAATTAAGAAAAAGAATGTGATTTCATGGACTTCAGTTGTATCTTCCTGTTGTGATAATGGTCAAGCAGCTCGGAGTTTAAGTTTTTTCTTCGAGATGCTCTCGGATGATGTGGAACCAAACGAGTACACTTTAACAAGTGTCTTGAGCGCTTGTTGTGTAATGTTGACATTGGGTTTAGGAGCACAGATTCATTCACTGAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTAATGTACTTATACCTGAAATGTGGATGGCTTATTGAGGCTCAAAAATTGTTTGAGAGTATGGAGACTCTCAATTTGATTACATGGAATGCAATGATTGCAGGCCATGCGAAAATGATGGATCTTGCTGCAGATGATCTTGCAGCTCACAAGAGTGGATTTACAGCGCTTACTATGTTCCAGAAATTATATCGCTCGGGCATGAAACCGGATCTATTCACATTCTCGAGCGTTTTAAGTGTTTGTAGTAATCTAGTAGCCTTGGAACAAGGGGAGCAGATTCATGCTCAGATAATCAAAAGTGGTGTATTGGCAGATGTTGTGGTGGGAACTGCATTGGTGAGTATGTATAACAAATGTGGAAGTACTGATCGGGCGAGTAAAGCTTTCTTGGAGATGCCTTCAAGAACTTTGATATCATGGACTTCGATGATTACGGGATTTGCACGACACAGTCTGTCTCAACAAGCACTTCAGCTCTTTGAAGACATGAGATTGGCAGGAATTAGACCGAACCAGGTCACCTTTGTAGGTGTTCTATCAGCTTGTAGCCATGCTGGTTTGGTTGATGAAGCACTTTATTACTTTGAAGTAATGCAGAAGCAATACAACATCAAGCCTGTAATGGACCATTTTGCATGCCTGATTGACATGTATCTGAGGTTGGGTCGGGTTGAAGAAGCTTTTGATGTGGTCAAGAAGATGAATTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCTGGATGTCGTAGTCATGGGAACTCCGAATTGGGGTTTTACGCTGCTGAGCAGTTACTTAAACTCAAACCGAAAGACACCAAGACCTATGTCTCCCTGCTAAACATGTATCTCTCTGCTGGGAGATGGAAGGATGTTTCCAAAGTAAGGAAATTAATGAAAGAAGAGAAGGTTGGGAAGTTGAAAGATTGGAGCTGGATTAGCATCAAAGAAAAAGTATATTCATTCAAACCCAATGACAAATCACATTGTCAAAGTGCGGAGATGTACAATCTGTTGGAAACTATACTCAATGAGGTAAAAACTCTCGGTTATGAGCCTGTTGAACATATGGAGGTAATCGAAGAGGAGGAAGATGAGGAAAAGGTATTCTCCTCTACCATTCATCATAGTGAAAAATTAGCCGTTACTTTTGGTTTGTTAAACCTGCCAACTGCCACCACGATTCGGGTTGTAAAGAGCATCACCATGTGTAGAGATTGCCACAATTTTATCAGATTCATTTCTTTATTAAAAGGAAGGGAAATCATCATCCGAGATAGTAAGCAGCTTCATAAGTTTTTGAACGGATACTGTTCTTGTGGAGGTTTCGGAGATCTTTAATGTAGTTGGTGAGATGCTAAATTTTTTACAAAACCTAGTAAAATTCAATTGTCAAAATATCATATGAAGTTAATTTCAGTAAGATCAGAAGAATAACCCGCTGATATTGAGCTTCAGAGGAATACCACGACAATTTAATGTCAACGCCATTGTTTCTTCTCTATTTAGCGGAAGAATGGCGAGGCATCAGTCTGCAAATTTGCAAAGAGATTTTAATAAAAACTTGATGATAGTATATACAAATATTCTTTATACAAATATCCTAGGAATTCTTATCTTCTCACTATTGGCCAAAAGTGGAGACAAGGTATAATTAATTAAAGAACTGTAAACATATGTCAACATCATACTGCTTTGGTCTTCTTCCTCTGGTTAGATGATGCTGTGAAATTTCTCAGGCTTTGATGCATACAAAATCAACGTTTTTTACTCTTGTTCTTGGTGATCCTTGATTTGCTGGTGTCAATTGAAGGTTTCCAGATGATATCTTCAAGTTTGCTATAAAAGCTCTTGTAGAACTGCGACACATAATGGCATTGTTTCAATATTTATGAAGTATAATGGGATAATTGTGGATGGGAATGAGGAGAAATGTTGTATACTCTTTAAGCGGCAGATATCGATCAATATTCGATGACAAAAGACAACATGGAAATTCTACCCTGACCTACCTTGAGGTACTCGCTGGTTTCCCCTGCTGCTTTCTGGATGTCCACCATAAAGAACGAGGGAGCAACTTCAAAAATCTACGAGAAAAATGATTCGGATCAAAGTCCTTGAACAGAATACAGAGATGGTAGAACTTTTCGTGCAGAAAAATGGTGAAACTTACTTCCATAATGACTGAGAAATACGAAGTTTTGCTTGCCGATGGGCCTTCTACTCTCATCTGACATTCACCAGAAATTTGATTAAGAGTAGGCTAAATTATAAGTTTAGCTCTGAACTTTAAGAATGTCTAATAAGTCCTCAAAATTTCAATTTTGTGTAAGTCTAATACATCATTCAACTTTAAAATGTATCTTATAGGTTTTTAAACTTTCACTTTTGTGTTTAATATGTCCTTGACCTATTCAATATTTTTTAAAATTACGAATCTGATTGAAA

mRNA sequence

ATCTCTTCCCCTCTCAAAATCCCACCATTATTAAGTAATCTCTAAATTCCTTTTCCCTTCTTCCTTCCATGGCTTCCTTCCCTTCTGTTACTCTCACTGCTTCTCTCAAGCTCGAACCTGACTCAAGAAAGCGACATTACACCAGCTTTCCCCTCAACGATAAGAGTTTGCCGTATCAGAAAAATCATTCACTAATCCAATTGAATGTTGATGCGGAGTCGAAGTTTGTAGATCTTCGGGAAGCTCTGTCGCTGTTAAAAGATGGTACGAGAATTGAAACTTCTTACTATATTCCATTATTGCAAGAATGTATAGATGGGAATTTAGCTGCAGAAGCGGAAATTATCCATGGGCATGTCGTAAAAACTGGAACTCATGAAGACTTATTTGTAATGACTTTTCTTGTTAACGTTTATGCGAAATGCGGAGTCATGGAAATTGCTCGCAAAGTGTTTGATAATTTGCCTAGAAGAAATGTCATTGCATGGACAACTCTAGTGACTGGTTATGTTCAGAATTCACAGCCTTTGGTTGCTTTTCAAGTGTTCATAGAAATGTTGGAAGCTGGAGCTTATCCTACAAACTATACGCTCGGAATCGTGTTGAATGCTTGTTGTTCCTTGCATTCTATCGAATTCGGGAAGCAGGTTCATGCATATATCATCAAATATCATATAGATTTCGACACTAGTATTGGCAACTCTCTTTCCAACTTTTACTCTAAGTCTGGGAGCTTGGAATTTGCAATTAGAGCCTTCAAGAAAATTAAGAAAAAGAATGTGATTTCATGGACTTCAGTTGTATCTTCCTGTTGTGATAATGGTCAAGCAGCTCGGAGTTTAAGTTTTTTCTTCGAGATGCTCTCGGATGATGTGGAACCAAACGAGTACACTTTAACAAGTGTCTTGAGCGCTTGTTGTGTAATGTTGACATTGGGTTTAGGAGCACAGATTCATTCACTGAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTAATGTACTTATACCTGAAATGTGGATGGCTTATTGAGGCTCAAAAATTGTTTGAGAGTATGGAGACTCTCAATTTGATTACATGGAATGCAATGATTGCAGGCCATGCGAAAATGATGGATCTTGCTGCAGATGATCTTGCAGCTCACAAGAGTGGATTTACAGCGCTTACTATGTTCCAGAAATTATATCGCTCGGGCATGAAACCGGATCTATTCACATTCTCGAGCGTTTTAAGTGTTTGTAGTAATCTAGTAGCCTTGGAACAAGGGGAGCAGATTCATGCTCAGATAATCAAAAGTGGTGTATTGGCAGATGTTGTGGTGGGAACTGCATTGGTGAGTATGTATAACAAATGTGGAAGTACTGATCGGGCGAGTAAAGCTTTCTTGGAGATGCCTTCAAGAACTTTGATATCATGGACTTCGATGATTACGGGATTTGCACGACACAGTCTGTCTCAACAAGCACTTCAGCTCTTTGAAGACATGAGATTGGCAGGAATTAGACCGAACCAGGTCACCTTTGTAGGTGTTCTATCAGCTTGTAGCCATGCTGGTTTGGTTGATGAAGCACTTTATTACTTTGAAGTAATGCAGAAGCAATACAACATCAAGCCTGTAATGGACCATTTTGCATGCCTGATTGACATGTATCTGAGGTTGGGTCGGGTTGAAGAAGCTTTTGATGTGGTCAAGAAGATGAATTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCTGGATGTCGTAGTCATGGGAACTCCGAATTGGGGTTTTACGCTGCTGAGCAGTTACTTAAACTCAAACCGAAAGACACCAAGACCTATGTCTCCCTGCTAAACATGTATCTCTCTGCTGGGAGATGGAAGGATGTTTCCAAAGTAAGGAAATTAATGAAAGAAGAGAAGGTTGGGAAGTTGAAAGATTGGAGCTGGATTAGCATCAAAGAAAAAGTATATTCATTCAAACCCAATGACAAATCACATTGTCAAAGTGCGGAGATGTACAATCTGTTGGAAACTATACTCAATGAGGTAAAAACTCTCGGTTATGAGCCTGTTGAACATATGGAGGTAATCGAAGAGGAGGAAGATGAGGAAAAGGTATTCTCCTCTACCATTCATCATAGTGAAAAATTAGCCGTTACTTTTGGTTTGTTAAACCTGCCAACTGCCACCACGATTCGGGTTGTAAAGAGCATCACCATGTGTAGAGATTGCCACAATTTTATCAGATTCATTTCTTTATTAAAAGGAAGGGAAATCATCATCCGAGATAGTAAGCAGCTTCATAAGTTTTTGAACGGATACTGTTCTTGTGGAGGTTTCGGAGATCTTTAATGTAGTTGGCTTTGATGCATACAAAATCAACGTTTTTTACTCTTGTTCTTGGTGATCCTTGATTTGCTGGTGTCAATTGAAGGTTTCCAGATGATATCTTCAAGTTTGCTATAAAAGCTCTTGTAGAACTGCGACACATAATGGCATTGTTTCAATATTTATGAAGTATAATGGGATAATTGTGGATGGGAATGAGGAGAAATGTTGTATACTCTTTAAGCGGCAGATATCGATCAATATTCGATGACAAAAGACAACATGGAAATTCTACCCTGACCTACCTTGAGGTACTCGCTGGTTTCCCCTGCTGCTTTCTGGATGTCCACCATAAAGAACGAGGGAGCAACTTCAAAAATCTACGAGAAAAATGATTCGGATCAAAGTCCTTGAACAGAATACAGAGATGGTAGAACTTTTCGTGCAGAAAAATGGTGAAACTTACTTCCATAATGACTGAGAAATACGAAGTTTTGCTTGCCGATGGGCCTTCTACTCTCATCTGACATTCACCAGAAATTTGATTAAGAGTAGGCTAAATTATAAGTTTAGCTCTGAACTTTAAGAATGTCTAATAAGTCCTCAAAATTTCAATTTTGTGTAAGTCTAATACATCATTCAACTTTAAAATGTATCTTATAGGTTTTTAAACTTTCACTTTTGTGTTTAATATGTCCTTGACCTATTCAATATTTTTTAAAATTACGAATCTGATTGAAA

Coding sequence (CDS)

ATGGCTTCCTTCCCTTCTGTTACTCTCACTGCTTCTCTCAAGCTCGAACCTGACTCAAGAAAGCGACATTACACCAGCTTTCCCCTCAACGATAAGAGTTTGCCGTATCAGAAAAATCATTCACTAATCCAATTGAATGTTGATGCGGAGTCGAAGTTTGTAGATCTTCGGGAAGCTCTGTCGCTGTTAAAAGATGGTACGAGAATTGAAACTTCTTACTATATTCCATTATTGCAAGAATGTATAGATGGGAATTTAGCTGCAGAAGCGGAAATTATCCATGGGCATGTCGTAAAAACTGGAACTCATGAAGACTTATTTGTAATGACTTTTCTTGTTAACGTTTATGCGAAATGCGGAGTCATGGAAATTGCTCGCAAAGTGTTTGATAATTTGCCTAGAAGAAATGTCATTGCATGGACAACTCTAGTGACTGGTTATGTTCAGAATTCACAGCCTTTGGTTGCTTTTCAAGTGTTCATAGAAATGTTGGAAGCTGGAGCTTATCCTACAAACTATACGCTCGGAATCGTGTTGAATGCTTGTTGTTCCTTGCATTCTATCGAATTCGGGAAGCAGGTTCATGCATATATCATCAAATATCATATAGATTTCGACACTAGTATTGGCAACTCTCTTTCCAACTTTTACTCTAAGTCTGGGAGCTTGGAATTTGCAATTAGAGCCTTCAAGAAAATTAAGAAAAAGAATGTGATTTCATGGACTTCAGTTGTATCTTCCTGTTGTGATAATGGTCAAGCAGCTCGGAGTTTAAGTTTTTTCTTCGAGATGCTCTCGGATGATGTGGAACCAAACGAGTACACTTTAACAAGTGTCTTGAGCGCTTGTTGTGTAATGTTGACATTGGGTTTAGGAGCACAGATTCATTCACTGAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTAATGTACTTATACCTGAAATGTGGATGGCTTATTGAGGCTCAAAAATTGTTTGAGAGTATGGAGACTCTCAATTTGATTACATGGAATGCAATGATTGCAGGCCATGCGAAAATGATGGATCTTGCTGCAGATGATCTTGCAGCTCACAAGAGTGGATTTACAGCGCTTACTATGTTCCAGAAATTATATCGCTCGGGCATGAAACCGGATCTATTCACATTCTCGAGCGTTTTAAGTGTTTGTAGTAATCTAGTAGCCTTGGAACAAGGGGAGCAGATTCATGCTCAGATAATCAAAAGTGGTGTATTGGCAGATGTTGTGGTGGGAACTGCATTGGTGAGTATGTATAACAAATGTGGAAGTACTGATCGGGCGAGTAAAGCTTTCTTGGAGATGCCTTCAAGAACTTTGATATCATGGACTTCGATGATTACGGGATTTGCACGACACAGTCTGTCTCAACAAGCACTTCAGCTCTTTGAAGACATGAGATTGGCAGGAATTAGACCGAACCAGGTCACCTTTGTAGGTGTTCTATCAGCTTGTAGCCATGCTGGTTTGGTTGATGAAGCACTTTATTACTTTGAAGTAATGCAGAAGCAATACAACATCAAGCCTGTAATGGACCATTTTGCATGCCTGATTGACATGTATCTGAGGTTGGGTCGGGTTGAAGAAGCTTTTGATGTGGTCAAGAAGATGAATTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCTGGATGTCGTAGTCATGGGAACTCCGAATTGGGGTTTTACGCTGCTGAGCAGTTACTTAAACTCAAACCGAAAGACACCAAGACCTATGTCTCCCTGCTAAACATGTATCTCTCTGCTGGGAGATGGAAGGATGTTTCCAAAGTAAGGAAATTAATGAAAGAAGAGAAGGTTGGGAAGTTGAAAGATTGGAGCTGGATTAGCATCAAAGAAAAAGTATATTCATTCAAACCCAATGACAAATCACATTGTCAAAGTGCGGAGATGTACAATCTGTTGGAAACTATACTCAATGAGGTAAAAACTCTCGGTTATGAGCCTGTTGAACATATGGAGGTAATCGAAGAGGAGGAAGATGAGGAAAAGGTATTCTCCTCTACCATTCATCATAGTGAAAAATTAGCCGTTACTTTTGGTTTGTTAAACCTGCCAACTGCCACCACGATTCGGGTTGTAAAGAGCATCACCATGTGTAGAGATTGCCACAATTTTATCAGATTCATTTCTTTATTAAAAGGAAGGGAAATCATCATCCGAGATAGTAAGCAGCTTCATAAGTTTTTGAACGGATACTGTTCTTGTGGAGGTTTCGGAGATCTTTAA

Protein sequence

MASFPSVTLTASLKLEPDSRKRHYTSFPLNDKSLPYQKNHSLIQLNVDAESKFVDLREALSLLKDGTRIETSYYIPLLQECIDGNLAAEAEIIHGHVVKTGTHEDLFVMTFLVNVYAKCGVMEIARKVFDNLPRRNVIAWTTLVTGYVQNSQPLVAFQVFIEMLEAGAYPTNYTLGIVLNACCSLHSIEFGKQVHAYIIKYHIDFDTSIGNSLSNFYSKSGSLEFAIRAFKKIKKKNVISWTSVVSSCCDNGQAARSLSFFFEMLSDDVEPNEYTLTSVLSACCVMLTLGLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFESMETLNLITWNAMIAGHAKMMDLAADDLAAHKSGFTALTMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHAQIIKSGVLADVVVGTALVSMYNKCGSTDRASKAFLEMPSRTLISWTSMITGFARHSLSQQALQLFEDMRLAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLKPKDTKTYVSLLNMYLSAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETILNEVKTLGYEPVEHMEVIEEEEDEEKVFSSTIHHSEKLAVTFGLLNLPTATTIRVVKSITMCRDCHNFIRFISLLKGREIIIRDSKQLHKFLNGYCSCGGFGDL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G22070.19.0e-13434.73pentatricopeptide (PPR) repeat-containing protein [more]
AT1G11290.12.5e-12836.22Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G27610.11.7e-12734.47Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G49170.12.2e-12734.01Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G14850.11.5e-12535.04Pentatricopeptide repeat (PPR) superfamily protein [more]
Match NameE-valueIdentityDescription
Q9SHZ81.3e-13234.73Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q3E6Q13.6e-12736.22Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9ZUW32.3e-12634.47Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... [more]
Q5G1T13.0e-12634.01Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
Q0WSH62.2e-12435.04Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1BQL40.0e+0088.85putative pentatricopeptide repeat-containing protein At5g52630 OS=Momordica char... [more]
A0A6J1KJZ50.0e+0086.11pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima O... [more]
A0A1S3BBK80.0e+0086.35putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo O... [more]
A0A0A0LRW60.0e+0085.98DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G3721... [more]
A0A6J1GH280.0e+0084.80putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita mosc... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 624..748
e-value: 5.0E-28
score: 97.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 312..337
e-value: 0.0083
score: 16.3
coord: 424..449
e-value: 1.1
score: 9.6
coord: 590..618
e-value: 0.024
score: 14.9
coord: 527..548
e-value: 0.005
score: 17.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 452..485
e-value: 2.2E-6
score: 25.5
coord: 590..619
e-value: 0.0028
score: 15.7
coord: 239..273
e-value: 3.3E-5
score: 21.8
coord: 487..520
e-value: 2.5E-4
score: 19.0
coord: 139..171
e-value: 4.7E-4
score: 18.2
coord: 525..548
e-value: 8.3E-4
score: 17.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 452..497
e-value: 6.8E-10
score: 39.0
coord: 236..284
e-value: 1.5E-8
score: 34.7
coord: 135..184
e-value: 1.9E-10
score: 40.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 10.654441
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 136..170
score: 10.029647
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 587..621
score: 9.097937
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 450..484
score: 11.202506
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 515..698
e-value: 4.5E-17
score: 64.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 54..187
e-value: 6.3E-20
score: 73.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 188..289
e-value: 2.0E-18
score: 68.9
coord: 359..514
e-value: 1.1E-37
score: 132.0
coord: 290..358
e-value: 1.8E-5
score: 26.3
NoneNo IPR availablePANTHERPTHR47925:SF26PENTATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 69..695
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 69..695

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000745Bhi04M000745mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016573 histone acetylation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0000124 SAGA complex
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:1990841 promoter-specific chromatin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity
molecular_function GO:0008270 zinc ion binding