Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCGTTGCCTCTACTTCGTCCCTGCAACACGTTCCTCGGTTCAAGCCCTCCCCAGCTGTGGCCGACAGGATTGTTAGAGCTCTCCACCATCACCTCCGTCTTCTTCACCGCTCTGGTTCTAATTTCTTTGTGTTGGGAGCCACAGGCAATGTTTACATTGTGTCCCTATCCTCCACCCCTTCGTGCACTTGCCCGGATCGTATTACCCCATGCAAACACATACTATTTATCTATCTTCAAGCCCTGGGTTTGTCGCTTGATGACACATGTCTTCGGCGAAGGACACTTCGACCTTGCCAATTGAATCGTTTGCTTGCTGCACCCATAATGTTAAAATCACTTGCAGAAGTTGGTTTACGTGATGTATTTCATCAACAATTCTTTCAGGTAAAAGAAAGAGCTTCTGTAACTGTTGTAGATATGGAAGATGGGACTACATGTCCAGTTTGTTTGGATGATATGAAGAAGAAGGATCGGGTTGTTGCTTGTTCGACATGTCGGAATCTTGTTCATGAAGATTGTTTCTCGAGGTGGAAACGAAGCAAGGGAAGGAGAAGTGTTAGTTGTGTAGTTTGTAGGGCACGGTGGAAAGATAGGAAAGACCAACAAAAGTACTTGAATTTGTCTGCCTATATCAACGAACACGATGCAATTGACGACAATCTCTATAGTTGA
mRNA sequence
ATGGAGTCCGTTGCCTCTACTTCGTCCCTGCAACACGTTCCTCGGTTCAAGCCCTCCCCAGCTGTGGCCGACAGGATTGTTAGAGCTCTCCACCATCACCTCCGTCTTCTTCACCGCTCTGGTTCTAATTTCTTTGTGTTGGGAGCCACAGGCAATGTTTACATTGTGTCCCTATCCTCCACCCCTTCGTGCACTTGCCCGGATCGTATTACCCCATGCAAACACATACTATTTATCTATCTTCAAGCCCTGGGTTTGTCGCTTGATGACACATGTCTTCGGCGAAGGACACTTCGACCTTGCCAATTGAATCGTTTGCTTGCTGCACCCATAATGTTAAAATCACTTGCAGAAGTTGGTTTACGTGATGTATTTCATCAACAATTCTTTCAGGTAAAAGAAAGAGCTTCTGTAACTGTTGTAGATATGGAAGATGGGACTACATGTCCAGTTTGTTTGGATGATATGAAGAAGAAGGATCGGGTTGTTGCTTGTTCGACATGTCGGAATCTTGTTCATGAAGATTGTTTCTCGAGGTGGAAACGAAGCAAGGGAAGGAGAAGTGTTAGTTGTGTAGTTTGTAGGGCACGGTGGAAAGATAGGAAAGACCAACAAAAGTACTTGAATTTGTCTGCCTATATCAACGAACACGATGCAATTGACGACAATCTCTATAGTTGA
Coding sequence (CDS)
ATGGAGTCCGTTGCCTCTACTTCGTCCCTGCAACACGTTCCTCGGTTCAAGCCCTCCCCAGCTGTGGCCGACAGGATTGTTAGAGCTCTCCACCATCACCTCCGTCTTCTTCACCGCTCTGGTTCTAATTTCTTTGTGTTGGGAGCCACAGGCAATGTTTACATTGTGTCCCTATCCTCCACCCCTTCGTGCACTTGCCCGGATCGTATTACCCCATGCAAACACATACTATTTATCTATCTTCAAGCCCTGGGTTTGTCGCTTGATGACACATGTCTTCGGCGAAGGACACTTCGACCTTGCCAATTGAATCGTTTGCTTGCTGCACCCATAATGTTAAAATCACTTGCAGAAGTTGGTTTACGTGATGTATTTCATCAACAATTCTTTCAGGTAAAAGAAAGAGCTTCTGTAACTGTTGTAGATATGGAAGATGGGACTACATGTCCAGTTTGTTTGGATGATATGAAGAAGAAGGATCGGGTTGTTGCTTGTTCGACATGTCGGAATCTTGTTCATGAAGATTGTTTCTCGAGGTGGAAACGAAGCAAGGGAAGGAGAAGTGTTAGTTGTGTAGTTTGTAGGGCACGGTGGAAAGATAGGAAAGACCAACAAAAGTACTTGAATTTGTCTGCCTATATCAACGAACACGATGCAATTGACGACAATCTCTATAGTTGA
Protein sequence
MESVASTSSLQHVPRFKPSPAVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKSLAEVGLRDVFHQQFFQVKERASVTVVDMEDGTTCPVCLDDMKKKDRVVACSTCRNLVHEDCFSRWKRSKGRRSVSCVVCRARWKDRKDQQKYLNLSAYINEHDAIDDNLYS
Homology
BLAST of Bhi04G000703 vs. TAIR 10
Match:
AT5G11620.1 (SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related )
HSP 1 Score: 181.8 bits (460), Expect = 6.1e-46
Identity = 108/261 (41.38%), Postives = 140/261 (53.64%), Query Frame = 0
Query: 1 MESVASTSSLQHV----PRFKPSPAVADRIVRALHHHLRLLHR-SGSNFFVLGATGNVYI 60
MESV S +V R + VADRI+RAL H +RLLHR + F VLGAT NVY
Sbjct: 1 MESVGSNQISPYVSNRDQRHFLAQPVADRILRALRHRIRLLHRPNAGTFHVLGATCNVYT 60
Query: 61 VSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKS 120
V+L +TP+CTCPDR PCKHILF+ ++ LG+ LDD CLR+R LR C L L +AP
Sbjct: 61 VTLMATPTCTCPDRKKPCKHILFVLIRVLGIPLDDKCLRQRRLRTCLLFHLFSAPTRPDC 120
Query: 121 LAEVGLRDVFHQQFFQVKERASVTV------------VDMEDGTTCPVCLDDM------- 180
LA L+ F Q F + T VD E+ TCP+CLDD+
Sbjct: 121 LASFRLQQRFLQLFPATTSQPGYTTNSSSSTSKMENEVD-EEPATCPICLDDIIAIENVD 180
Query: 181 -------KKKDRVVACSTCRNLVHEDCFSRWKRSKGRRSVSCVVCRARWKDRKDQQK--- 217
+K+ VV C C+N VH++C W++S+GRR CVVCRARW + +
Sbjct: 181 GGNGGGKEKETAVVKCRVCKNKVHDECMLAWRKSRGRRPAICVVCRARWPANRSSKNPNV 240
BLAST of Bhi04G000703 vs. TAIR 10
Match:
AT2G46493.1 (RING/U-box superfamily protein )
HSP 1 Score: 45.1 bits (105), Expect = 9.0e-05
Identity = 31/123 (25.20%), Postives = 53/123 (43.09%), Query Frame = 0
Query: 76 ILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKSLAEVGLRDVFHQ---QFFQV 135
+L I L A+ + + TC+ R + + +AA +++ EV R Q + F+
Sbjct: 62 VLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQPREVMARRGLDQSTIETFKK 121
Query: 136 KERASVTVVDMEDGTTCPVCLDDMKKKDRVVACSTCRNLVHEDCFSRWKRSKGRRSVSCV 195
E + +G CP+CL + K+ V C + H +C W + G SC
Sbjct: 122 MELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHG----SCP 180
BLAST of Bhi04G000703 vs. ExPASy TrEMBL
Match:
A0A5A7VCN6 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003720 PE=4 SV=1)
HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 206/232 (88.79%), Postives = 213/232 (91.81%), Query Frame = 0
Query: 1 MESVASTSSLQHVPRFKPSPAVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS 60
MESVASTSS + VPRFKPS VADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS
Sbjct: 1 MESVASTSSPRPVPRFKPSQPVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS 60
Query: 61 TPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKSLAEVG 120
TPSCTCPDRITPCKHILFIYLQALGLSLDD CLRRRTLRPCQLNRLLAAPIMLKSLAE+G
Sbjct: 61 TPSCTCPDRITPCKHILFIYLQALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLKSLAEIG 120
Query: 121 LRDVFHQQFFQVKERA------SVTVVDMEDGTTCPVCLDDMKKKDRVVACSTCRNLVHE 180
LR VFHQQFFQV +RA VTV DMEDGT CPVCLDDMKK DRVVACSTCRNLVHE
Sbjct: 121 LRKVFHQQFFQVNDRACSSSSSCVTVEDMEDGTACPVCLDDMKKNDRVVACSTCRNLVHE 180
Query: 181 DCFSRWKRSKGRRSVSCVVCRARWKDRKDQQKYLNLSAYINEHDAIDDNLYS 227
DCF+RWKRSKGRR+VSCVVCRARWKD KD+QKYLNLSAYINEHD IDDNLY+
Sbjct: 181 DCFTRWKRSKGRRNVSCVVCRARWKDTKDEQKYLNLSAYINEHDTIDDNLYN 232
BLAST of Bhi04G000703 vs. ExPASy TrEMBL
Match:
A0A1S4DW96 (uncharacterized protein LOC103488177 OS=Cucumis melo OX=3656 GN=LOC103488177 PE=4 SV=1)
HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 206/232 (88.79%), Postives = 213/232 (91.81%), Query Frame = 0
Query: 1 MESVASTSSLQHVPRFKPSPAVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS 60
MESVASTSS + VPRFKPS VADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS
Sbjct: 1 MESVASTSSPRPVPRFKPSQPVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS 60
Query: 61 TPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKSLAEVG 120
TPSCTCPDRITPCKHILFIYLQALGLSLDD CLRRRTLRPCQLNRLLAAPIMLKSLAE+G
Sbjct: 61 TPSCTCPDRITPCKHILFIYLQALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLKSLAEIG 120
Query: 121 LRDVFHQQFFQVKERA------SVTVVDMEDGTTCPVCLDDMKKKDRVVACSTCRNLVHE 180
LR VFHQQFFQV +RA VTV DMEDGT CPVCLDDMKK DRVVACSTCRNLVHE
Sbjct: 121 LRKVFHQQFFQVNDRACSSSSSCVTVEDMEDGTACPVCLDDMKKNDRVVACSTCRNLVHE 180
Query: 181 DCFSRWKRSKGRRSVSCVVCRARWKDRKDQQKYLNLSAYINEHDAIDDNLYS 227
DCF+RWKRSKGRR+VSCVVCRARWKD KD+QKYLNLSAYINEHD IDDNLY+
Sbjct: 181 DCFTRWKRSKGRRNVSCVVCRARWKDTKDEQKYLNLSAYINEHDTIDDNLYN 232
BLAST of Bhi04G000703 vs. ExPASy TrEMBL
Match:
A0A0A0LS10 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373540 PE=4 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 6.1e-110
Identity = 206/235 (87.66%), Postives = 212/235 (90.21%), Query Frame = 0
Query: 1 MESVASTSSLQHVPRFKPSPAVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS 60
MESVASTSS VPRFKPS VADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS
Sbjct: 1 MESVASTSSPHSVPRFKPSQPVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYIVSLSS 60
Query: 61 TPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKSLAEVG 120
TPSCTCPDRITPCKHILFIYLQALGLSLDD CLRRRTLRPCQLNRLLAAPIMLKSLAE+G
Sbjct: 61 TPSCTCPDRITPCKHILFIYLQALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLKSLAEIG 120
Query: 121 LRDVFHQQFFQVKERA-------SVTVVDMEDGTTCPVCLDDMKKKDRVVACSTCRNLVH 180
LR VFHQQFFQV +RA SVTV DMEDG+ CPVCLDDMKKKDRVVACSTCRNLVH
Sbjct: 121 LRKVFHQQFFQVNDRAASSSSSSSVTVEDMEDGSACPVCLDDMKKKDRVVACSTCRNLVH 180
Query: 181 EDCFSRWKRSKGRRSVSCVVCRARWKDRKD-QQKYLNLSAY-INEHDAIDDNLYS 227
EDCF+RWKRSKGRR+VSCVVCRARWKD KD QQKYLNLSAY INEHD ID LY+
Sbjct: 181 EDCFTRWKRSKGRRNVSCVVCRARWKDTKDEQQKYLNLSAYIINEHDTIDATLYN 235
BLAST of Bhi04G000703 vs. ExPASy TrEMBL
Match:
A0A6J1BPZ4 (uncharacterized protein LOC111004703 OS=Momordica charantia OX=3673 GN=LOC111004703 PE=4 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 1.4e-98
Identity = 184/233 (78.97%), Postives = 205/233 (87.98%), Query Frame = 0
Query: 1 MESVASTSS-----LQHVPRFKPSPAVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYI 60
MESVASTSS H+ RFKPS AVADRIVRALHHHLRLLHRS SNFFVLGATGNVYI
Sbjct: 27 MESVASTSSPPRRPRLHLTRFKPSQAVADRIVRALHHHLRLLHRSDSNFFVLGATGNVYI 86
Query: 61 VSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKS 120
VSLS+TPSC+CPDRITPCKHILFIY++ALG+SLDD CLRRRTLRPC LNRLL APIML+S
Sbjct: 87 VSLSTTPSCSCPDRITPCKHILFIYIRALGVSLDDACLRRRTLRPCHLNRLLTAPIMLES 146
Query: 121 LAEVGLRDVFHQQFFQVKERASVTVVDMEDGTTCPVCLDDMKK--KDRVVACSTCRNLVH 180
+A +G+R VFHQ+FFQVK RAS +VVD+EDGTTCPVCLD+MKK DRVVAC TCRN+VH
Sbjct: 147 VAAIGVRRVFHQRFFQVKGRASASVVDVEDGTTCPVCLDEMKKDDSDRVVACMTCRNVVH 206
Query: 181 EDCFSRWKRSKGRRSVSCVVCRARWKDRKDQQKYLNLSAYINEHDAIDDNLYS 227
EDCF RWKRSKGRRSVSCVVCRARW+D Q+KYLNLSAYINE I+++LY+
Sbjct: 207 EDCFLRWKRSKGRRSVSCVVCRARWRDTSGQEKYLNLSAYINE---INNDLYN 256
BLAST of Bhi04G000703 vs. ExPASy TrEMBL
Match:
A0A6J1GJ16 (mitogen-activated protein kinase kinase kinase 1 OS=Cucurbita moschata OX=3662 GN=LOC111454315 PE=4 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 3.1e-98
Identity = 177/231 (76.62%), Postives = 202/231 (87.45%), Query Frame = 0
Query: 1 MESVASTSSLQHVPR-----FKPSPAVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYI 60
MESVASTSS PR F+PS A+ RIVRALHHHLRLLHRS S+FFVLGATGNVYI
Sbjct: 13 MESVASTSSAPDRPRPRLPWFEPSQAMTARIVRALHHHLRLLHRSDSSFFVLGATGNVYI 72
Query: 61 VSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDTCLRRRTLRPCQLNRLLAAPIMLKS 120
VSLSSTPSCTCPDRITPCKH+LF+Y++ALG+SLDD CL RRTLRPCQLNRLL AP+M +S
Sbjct: 73 VSLSSTPSCTCPDRITPCKHMLFVYIRALGVSLDDACLWRRTLRPCQLNRLLTAPVMAES 132
Query: 121 LAEVGLRDVFHQQFFQVKERASVTVVDMEDGTTCPVCLDDMKKKDRVVACSTCRNLVHED 180
LAE+ LR VFHQQFFQVKER V +VD+EDG CPVCLDD+ K DRVVAC+TCRNLVH+D
Sbjct: 133 LAEISLRRVFHQQFFQVKERTCVPIVDIEDGAACPVCLDDL-KDDRVVACTTCRNLVHDD 192
Query: 181 CFSRWKRSKGRRSVSCVVCRARWKDRKDQQKYLNLSAYINEHDAIDDNLYS 227
CFSRWKRSKGRR++SCVVCRARWKD ++QKYLNLSAY++EHDA+D+N Y+
Sbjct: 193 CFSRWKRSKGRRNISCVVCRARWKDTTNEQKYLNLSAYLDEHDAVDNNRYN 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT5G11620.1 | 6.1e-46 | 41.38 | SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase... | [more] |
AT2G46493.1 | 9.0e-05 | 25.20 | RING/U-box superfamily protein | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VCN6 | 2.0e-113 | 88.79 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A1S4DW96 | 2.0e-113 | 88.79 | uncharacterized protein LOC103488177 OS=Cucumis melo OX=3656 GN=LOC103488177 PE=... | [more] |
A0A0A0LS10 | 6.1e-110 | 87.66 | SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373540 P... | [more] |
A0A6J1BPZ4 | 1.4e-98 | 78.97 | uncharacterized protein LOC111004703 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
A0A6J1GJ16 | 3.1e-98 | 76.62 | mitogen-activated protein kinase kinase kinase 1 OS=Cucurbita moschata OX=3662 G... | [more] |