Bhi03G002210 (gene) Wax gourd (B227) v1

Overview
NameBhi03G002210
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 66707400 .. 66709387 (+)
RNA-Seq ExpressionBhi03G002210
SyntenyBhi03G002210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGACTGTAAAAATCTAAAGTTGTGGAAATGGTGTTTAATTTAAACGCTCGTGGACAGAGCTCTTAATTAGTCTTGAGCTTTTCACAGCAACAATGGCTTCTATCAAGATCGCTTGGAGTTGGATGTTCTTCAAACTGCTTTTCTTCACAGTGCTTCTCATCGCCTCTACAGCTTCTCCAATGGAACATAACATTATTCCTAATTCCTTTCGTAAGATTTCTTTCCCTTTCTTCTTTATTCTCTTTCCTTTGTTGATGAACTAATTTGGGATATTGTAAAAATGTTTTTTCTTATATGAAAATTATTATTACTATTTAATAATTTTTATTAAGAATTAATTTTGAGGGACTTAATCCGGAGATATTCACATATTGAAATGATGATTATACGTTAGGATGGAGAATTAAACCTTTCATCTTAAAGGAGAGAATAGTGCATACAACTCGATATATTATCATTGAGTTAAACTCACTCTGATTTGTGCTTATAATAATCTATTATACAAACTTACTGCAAGAATATAATTAAATTCATTGTAGTTCGGTGAACTCAACAGACCATTTGACAAGAAGATTTTAAAATTGTGGAGTTCTTTTATATCCCTTTCCTTTTTGTACAATTCTCAAAATCTATTTTTTTAGTTAATTGCAACAGATAACAATGTTAAGGCTAATAATTAAGTATATAACAACATTTTTAAATAATTACCAATATAACAAAATTTATCTATAATAGACTCTATTGGTGATAGACTCCTATTAGTGATAGACTTTATCGATAATAGATTCCTATTAGCGATATGGTCGTCTATTAGCAATGTGGTCTATCACTAATAAATCTTGAGGCTTGGATCTAATATCTGCTATATTTACAAAATCTTTTACATTGTGTTATATATGCTTTCGGACCTAATTGCTATATTTACAATTATACCCTTATTTTCCTATTACACTTACTCTCTAAAACCTATATACTTTTCTTATTTTTAGATTATCTTTATATTTATGTTCCCTATGTGAATTATCTTTAGCCATATTGTTTTTGGTCTAAGCTTAAAAAAAAAGAACTAAAGAAAAAAAAAAATTTAGTTTGACGTTTGATAGGTTTTCACTTATTTTGTTGTCAAATATATTTTTAAGAAAAAAGTGACCTATTTGGTCATCGAATTTGGAAGAATAGGTGTTTGTTTCTTGAGTTATTAAAATGATTTTTTAAAAATATATATTTCAAGGATTACCTTTTAAAATTTAAAAATAATTAAAAAATTCTCTCTTTTCCCTCCTTCCTCCTCCTTCCTCTTCCTTCCACCCTTCTTCTTCTTCATCTCCCCTTCTCTCTTCTTCTTCACCTACCAAGTTAGCCCGAGTACCTCACGTATATTACTAAAACAAAAACAAAAAAGAAAACATTTTCACAGACGTCAACATTTTAAACTGTGGCTTAACCAAAAAATATGTCATTTAAGAAGGTAAGCTAACAGACTTACAACTTGTAATATCAACTCTGAAAGCAAAGGTTCGATTCTCACCCCTATATATTGTAAAAAATAGTAATAACAATAAACAAAAAAGAAAGAAAATAGAGAAATATAATGAAAATTAATTTATGGTTATAACAAATAATTAATTTTGAGTTATGGTATATGTTTTTGAAGGTAAGATGAGGATGGAGTATAGAAGTGTTAGGAAGGCTGGGTTGGGAGCAAAGCCAGCAGTTCATGATTTCCCATGGAAGGGTGGTTATAATCCTCCAGACAACAACCGTTGATTTCCTATTTTATTGGATCCATATATTATGCAACCTTGAACCATTGATGATGTACTTTTTTGTTGCTTTGTTTCTTTAATGTTCATTTTGCTTTAATTGAACAAAAGCTTTCATTTTATCTTTCATATTGATTCGGTCTGCTAAATTATGAGGTTGGAATATTTTAGTCTTGTGAAGAAGTCGAGTGTTGTTTGCTATTATAAGACATTGGAAGCGCA

mRNA sequence

GTTTGACTGTAAAAATCTAAAGTTGTGGAAATGGTGTTTAATTTAAACGCTCGTGGACAGAGCTCTTAATTAGTCTTGAGCTTTTCACAGCAACAATGGCTTCTATCAAGATCGCTTGGAGTTGGATGTTCTTCAAACTGCTTTTCTTCACAGTGCTTCTCATCGCCTCTACAGCTTCTCCAATGGAACATAACATTATTCCTAATTCCTTTCGTAAGATGAGGATGGAGTATAGAAGTGTTAGGAAGGCTGGGTTGGGAGCAAAGCCAGCAGTTCATGATTTCCCATGGAAGGGTGGTTATAATCCTCCAGACAACAACCGTTGATTTCCTATTTTATTGGATCCATATATTATGCAACCTTGAACCATTGATGATGTACTTTTTTGTTGCTTTGTTTCTTTAATGTTCATTTTGCTTTAATTGAACAAAAGCTTTCATTTTATCTTTCATATTGATTCGGTCTGCTAAATTATGAGGTTGGAATATTTTAGTCTTGTGAAGAAGTCGAGTGTTGTTTGCTATTATAAGACATTGGAAGCGCA

Coding sequence (CDS)

ATGGCTTCTATCAAGATCGCTTGGAGTTGGATGTTCTTCAAACTGCTTTTCTTCACAGTGCTTCTCATCGCCTCTACAGCTTCTCCAATGGAACATAACATTATTCCTAATTCCTTTCGTAAGATGAGGATGGAGTATAGAAGTGTTAGGAAGGCTGGGTTGGGAGCAAAGCCAGCAGTTCATGATTTCCCATGGAAGGGTGGTTATAATCCTCCAGACAACAACCGTTGA

Protein sequence

MASIKIAWSWMFFKLLFFTVLLIASTASPMEHNIIPNSFRKMRMEYRSVRKAGLGAKPAVHDFPWKGGYNPPDNNR
Homology
[Close]
BLAST of Bhi03G002210 vs. NCBI nr
Match: TYK18975.1 (hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 4.2e-17
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0 

Query: 1  MASIKIAWSWMFFKLLFFTVLLIASTASPMEHNIIPNSFRKMRMEYRSVRKAGLGAKPAV 60
          MASI I   W+ FKLLFFT+LLI ++ +       P   +KMRMEYRSVRK  LGAKPAV
Sbjct: 1  MASINII--WIIFKLLFFTLLLITTSTAFQPQLHEPRFRKKMRMEYRSVRKGALGAKPAV 60

Query: 61 HDFPWKGGYNPPDNNR 77
          +DFPWKGGYNPPDNNR
Sbjct: 61 YDFPWKGGYNPPDNNR 74

[Close]
BLAST of Bhi03G002210 vs. NCBI nr
Match: KGN53822.1 (hypothetical protein Csa_015192 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-14
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0 

Query: 11 MFFKLLFFTVLLIASTASPMEHNIIPNSFRKMRMEYRSVRKAGLGAKPAVHDFPWKGGYN 70
          + FKLLFFT+LLI ++++       P+  +KMRMEYRSVRKA LG KPAV+DFPWKGGYN
Sbjct: 10 IIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYN 69

Query: 71 PPDNNR 77
          PP NNR
Sbjct: 70 PPHNNR 75

[Close]
BLAST of Bhi03G002210 vs. NCBI nr
Match: XP_022141390.1 (uncharacterized protein LOC111011803 [Momordica charantia])

HSP 1 Score: 71.6 bits (174), Expect = 3.2e-09
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0 

Query: 1   MASIKIAWSWMFFKLLFFTVLLIASTASPMEHNIIPN-SFRKMRMEYRSVRKAGLGAKPA 60
           MAS++I++     KL FF +LLIAS  S    +I      RK+ MEYRSV KA L AK A
Sbjct: 42  MASLRISF---VLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAA 101

Query: 61  VHDFPWKGGYNPPDNN 76
            +DFPWKGGYNPP+NN
Sbjct: 102 SYDFPWKGGYNPPNNN 114

[Close]
BLAST of Bhi03G002210 vs. NCBI nr
Match: KAG6602002.1 (hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.3 bits (155), Expect = 5.2e-07
Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 1  MASIKIAWSWMFFKLLFFTVLLIASTASPMEHNIIPNSF-----RKMRMEYRSVRKAGLG 60
          M S KI+ +  F    F  +LL+A T S  +   I  SF     RK+ MEY +V KA L 
Sbjct: 1  MGSHKISMALPF----FLALLLVAFTVSAAD---ISASFQKPHIRKLSMEYTTVEKAALR 60

Query: 61 AKPAVHDFPWKGGYNPPDNNR 77
          AKPAV+DFPWKGGY+PP N+R
Sbjct: 61 AKPAVYDFPWKGGYHPPANDR 74

[Close]
BLAST of Bhi03G002210 vs. ExPASy TrEMBL
Match: A0A5D3D619 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00680 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-17
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0 

Query: 1  MASIKIAWSWMFFKLLFFTVLLIASTASPMEHNIIPNSFRKMRMEYRSVRKAGLGAKPAV 60
          MASI I   W+ FKLLFFT+LLI ++ +       P   +KMRMEYRSVRK  LGAKPAV
Sbjct: 1  MASINII--WIIFKLLFFTLLLITTSTAFQPQLHEPRFRKKMRMEYRSVRKGALGAKPAV 60

Query: 61 HDFPWKGGYNPPDNNR 77
          +DFPWKGGYNPPDNNR
Sbjct: 61 YDFPWKGGYNPPDNNR 74

[Close]
BLAST of Bhi03G002210 vs. ExPASy TrEMBL
Match: A0A0A0KZM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.5e-15
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0 

Query: 11 MFFKLLFFTVLLIASTASPMEHNIIPNSFRKMRMEYRSVRKAGLGAKPAVHDFPWKGGYN 70
          + FKLLFFT+LLI ++++       P+  +KMRMEYRSVRKA LG KPAV+DFPWKGGYN
Sbjct: 10 IIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYN 69

Query: 71 PPDNNR 77
          PP NNR
Sbjct: 70 PPHNNR 75

[Close]
BLAST of Bhi03G002210 vs. ExPASy TrEMBL
Match: A0A6J1CHY3 (uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011803 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0 

Query: 1   MASIKIAWSWMFFKLLFFTVLLIASTASPMEHNIIPN-SFRKMRMEYRSVRKAGLGAKPA 60
           MAS++I++     KL FF +LLIAS  S    +I      RK+ MEYRSV KA L AK A
Sbjct: 42  MASLRISF---VLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAA 101

Query: 61  VHDFPWKGGYNPPDNN 76
            +DFPWKGGYNPP+NN
Sbjct: 102 SYDFPWKGGYNPPNNN 114

The following BLAST results are available for this feature:
BLAST of Bhi03G002210 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G002210 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G002210 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK18975.14.2e-1765.79hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa][more]
KGN53822.11.1e-1465.15hypothetical protein Csa_015192 [Cucumis sativus][more]
XP_022141390.13.2e-0955.26uncharacterized protein LOC111011803 [Momordica charantia][more]
KAG6602002.15.2e-0749.38hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Bhi03G002210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D6192.0e-1765.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KZM05.5e-1565.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1[more]
A0A6J1CHY31.6e-0955.26uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M002210Bhi03M002210mRNA