Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAATTAGTTATTCTAATGTGTTTTTCGGAGCTTGTGCTTTCATTCTCCTTGGGTTGCATAGTACAATCTACCAAGCAGATGCTAGAAATTTTTTTGTAGTGGAGAAAGGCGACTCTACTGTCGAAAACGAATTGAGCGACGAGAATATAAAGCATCCAAAAAGGCATATCCATTTCTCATTAGGAAAACACAAGAGAATACCTGACTTAGCTCCACCTTTTAGCTTAGGAATTCTATCGAAAGAAAAACGCGTTCCTCCATTTGGACCGAGTCAAAGTACATCAGACAATCCATCTCCCCCACCGCACGTCTCATCCATCATTTTACATAAGGCATCTAGGATCAACTTCGGAATATTACCAAAAGGAAACCGTATTCCTCCATCTGGTCCGAGTCAAAGAACTTCAGAAAGTTCACCTCCTCCACCACATGCCCCATCTGTTATTTTACAACAAGGAATCTGGTATCAGTTTTGGAATATTACCAAAAAGTATGCATATTCCTCCGTCTGGACCGAGTAA
mRNA sequence
ATGGTGTCAATTAGTTATTCTAATGTGTTTTTCGGAGCTTGTGCTTTCATTCTCCTTGGGTTGCATAGTACAATCTACCAAGCAGATGCTAGAAATTTTTTTGTAGTGGAGAAAGGCGACTCTACTGTCGAAAACGAATTGAGCGACGAGAATATAAAGCATCCAAAAAGGCATATCCATTTCTCATTAGGAAAACACAAGAGAATACCTGACTTAGCTCCACCTTTTAGCTTAGGAATTCTATCGAAAGAAAAACGCGTTCCTCCATTTGGACCGAGTCAAAGTACATCAGACAATCCATCTCCCCCACCGCACGTCTCATCCATCATTTTACATAAGGCATCTAGGATCAACTTCGGAATATTACCAAAAGGAAACCGTATTCCTCCATCTGGTCCGAGTCAAAGAACTTCAGAAAGTTCACCTCCTCCACCACATGCCCCATCTGTTATTTTACAACAAGGAATCTGGTATCAGTTTTGGAATATTACCAAAAAGTATGCATATTCCTCCGTCTGGACCGAGTAA
Coding sequence (CDS)
ATGGTGTCAATTAGTTATTCTAATGTGTTTTTCGGAGCTTGTGCTTTCATTCTCCTTGGGTTGCATAGTACAATCTACCAAGCAGATGCTAGAAATTTTTTTGTAGTGGAGAAAGGCGACTCTACTGTCGAAAACGAATTGAGCGACGAGAATATAAAGCATCCAAAAAGGCATATCCATTTCTCATTAGGAAAACACAAGAGAATACCTGACTTAGCTCCACCTTTTAGCTTAGGAATTCTATCGAAAGAAAAACGCGTTCCTCCATTTGGACCGAGTCAAAGTACATCAGACAATCCATCTCCCCCACCGCACGTCTCATCCATCATTTTACATAAGGCATCTAGGATCAACTTCGGAATATTACCAAAAGGAAACCGTATTCCTCCATCTGGTCCGAGTCAAAGAACTTCAGAAAGTTCACCTCCTCCACCACATGCCCCATCTGTTATTTTACAACAAGGAATCTGGTATCAGTTTTGGAATATTACCAAAAAGTATGCATATTCCTCCGTCTGGACCGAGTAA
Protein sequence
MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIHFSLGKHKRIPDLAPPFSLGILSKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFGILPKGNRIPPSGPSQRTSESSPPPPHAPSVILQQGIWYQFWNITKKYAYSSVWTE
Homology
BLAST of Bhi03G001908 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 268.5 bits (685), Expect = 4.1e-68
Identity = 134/154 (87.01%), Postives = 141/154 (91.56%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
MVSISYSNVFFGACAFI LGLHSTIYQ DA+N FVVEKGDST+ENELSDENIKHPKRHIH
Sbjct: 1 MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60
Query: 61 FSLGKHKRIPDLAPPFSLGILSKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFG 120
FSLGK+KRIPDLAPPF+LGILSKE+RVPP G SQSTSDNP PPPHV SIILHK SRINF
Sbjct: 61 FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120
Query: 121 ILPKGNRIPPSGPSQRTSESSPPPPHAPSVILQQ 155
+L KGNRIPPSGPSQRTSES PPPPHA SVIL +
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHK 154
BLAST of Bhi03G001908 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 167.2 bits (422), Expect = 1.3e-37
Identity = 91/145 (62.76%), Postives = 109/145 (75.17%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
MVS+ +N+FF ACA I LGLH IY +A+ FVV++ +S++EN L + I HPK+ H
Sbjct: 1 MVSVG-TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60
Query: 61 FSLGKHKRIPDLAPPFSLGILSKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFG 120
FS K K+IPDLAPPFSLGILSK R PP G SQ TS+NP P PHV+ IILHK S +NFG
Sbjct: 61 FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNP-PSPHVAPIILHKESMVNFG 120
Query: 121 ILPKGNRIPPSGPSQRTSESSPPPP 146
ILPKG RIPPSGPS+RTS+ PPPP
Sbjct: 121 ILPKGVRIPPSGPSRRTSD--PPPP 141
BLAST of Bhi03G001908 vs. NCBI nr
Match:
KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 149.1 bits (375), Expect = 3.7e-32
Identity = 83/144 (57.64%), Postives = 101/144 (70.14%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
M+SIS SN+ F CA +LLGLH IYQ + RN F V++ +S ENEL +I HPK++IH
Sbjct: 1 MMSIS-SNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60
Query: 61 FSLGKHKRIPDLAPPFSLGILSKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFG 120
FSL K K P+ F GI SK+ R+PP GPSQ +SD+P P S+IL K SRINFG
Sbjct: 61 FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120
Query: 121 ILPKGNRIPPSGPSQRTSESSPPP 145
ILPKG+RIPPSGPSQR S+S PP
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLPP 139
BLAST of Bhi03G001908 vs. NCBI nr
Match:
KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa])
HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28
Identity = 93/233 (39.91%), Postives = 105/233 (45.06%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
M+S S SNV FG CA ILLGLH Y DAR+F V +G+ +EN+L+D I+HPKRHI
Sbjct: 8 MMSTS-SNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIR 67
Query: 61 FS---------------------------------------------------------- 120
FS
Sbjct: 68 FSWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPD 127
Query: 121 ----------------------LG----------------KHKRIPDLAPPFSLGILSKE 138
LG K KR+PDLAPPFSLGIL K+
Sbjct: 128 LAPPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKD 187
BLAST of Bhi03G001908 vs. NCBI nr
Match:
KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 132.1 bits (331), Expect = 4.6e-27
Identity = 93/233 (39.91%), Postives = 103/233 (44.21%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
M+S S SNV FGACA ILLG H Y DAR F VV +G+ +EN+L+D I+HPKRHI
Sbjct: 1 MMSTS-SNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIR 60
Query: 61 FS---------------------------------------------------------- 120
FS
Sbjct: 61 FSWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPD 120
Query: 121 ----------------------LG----------------KHKRIPDLAPPFSLGILSKE 138
LG K KR+PDLAPPFSLGILSK+
Sbjct: 121 LAPPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKD 180
BLAST of Bhi03G001908 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 6.3e-38
Identity = 91/145 (62.76%), Postives = 109/145 (75.17%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
MVS+ +N+FF ACA I LGLH IY +A+ FVV++ +S++EN L + I HPK+ H
Sbjct: 1 MVSVG-TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60
Query: 61 FSLGKHKRIPDLAPPFSLGILSKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFG 120
FS K K+IPDLAPPFSLGILSK R PP G SQ TS+NP P PHV+ IILHK S +NFG
Sbjct: 61 FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNP-PSPHVAPIILHKESMVNFG 120
Query: 121 ILPKGNRIPPSGPSQRTSESSPPPP 146
ILPKG RIPPSGPS+RTS+ PPPP
Sbjct: 121 ILPKGVRIPPSGPSRRTSD--PPPP 141
BLAST of Bhi03G001908 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 83/144 (57.64%), Postives = 101/144 (70.14%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
M+SIS SN+ F CA +LLGLH IYQ + RN F V++ +S ENEL +I HPK++IH
Sbjct: 1 MMSIS-SNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60
Query: 61 FSLGKHKRIPDLAPPFSLGILSKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFG 120
FSL K K P+ F GI SK+ R+PP GPSQ +SD+P P S+IL K SRINFG
Sbjct: 61 FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120
Query: 121 ILPKGNRIPPSGPSQRTSESSPPP 145
ILPKG+RIPPSGPSQR S+S PP
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLPP 139
BLAST of Bhi03G001908 vs. ExPASy TrEMBL
Match:
A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 5.3e-29
Identity = 93/233 (39.91%), Postives = 105/233 (45.06%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
M+S S SNV FG CA ILLGLH Y DAR+F V +G+ +EN+L+D I+HPKRHI
Sbjct: 8 MMSTS-SNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIR 67
Query: 61 FS---------------------------------------------------------- 120
FS
Sbjct: 68 FSWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPD 127
Query: 121 ----------------------LG----------------KHKRIPDLAPPFSLGILSKE 138
LG K KR+PDLAPPFSLGIL K+
Sbjct: 128 LAPPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKD 187
BLAST of Bhi03G001908 vs. ExPASy TrEMBL
Match:
A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.2e-27
Identity = 93/233 (39.91%), Postives = 103/233 (44.21%), Query Frame = 0
Query: 1 MVSISYSNVFFGACAFILLGLHSTIYQADARNFFVVEKGDSTVENELSDENIKHPKRHIH 60
M+S S SNV FGACA ILLG H Y DAR F VV +G+ +EN+L+D I+HPKRHI
Sbjct: 1 MMSTS-SNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIR 60
Query: 61 FS---------------------------------------------------------- 120
FS
Sbjct: 61 FSWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPD 120
Query: 121 ----------------------LG----------------KHKRIPDLAPPFSLGILSKE 138
LG K KR+PDLAPPFSLGILSK+
Sbjct: 121 LAPPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKD 180
BLAST of Bhi03G001908 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 1.4e-21
Identity = 67/133 (50.38%), Postives = 85/133 (63.91%), Query Frame = 0
Query: 25 IYQADARNFFVVEKGDSTVENELSDENIKHPKR-HIHFSLGKHKRIPDLAPPFSL--GIL 84
IY+ DA+N V+ D+ E EL+D +++PK I S + + P SL G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244
Query: 85 SKEKRVPPFGPSQSTSDNPSPPPHVSSIILHKASRINFGILPKGNRIPPSGPSQRTSESS 144
K +PP PSQ TSD P PPP SSIIL+K S+IN G+LP+G IPPSGPSQRTS+
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304
Query: 145 PPPPHAPSVILQQ 155
PPPPHA SVIL +
Sbjct: 305 PPPPHASSVILNK 317
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038882352.1 | 4.1e-68 | 87.01 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
KAA0040932.1 | 1.3e-37 | 62.76 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
KAA0043502.1 | 3.7e-32 | 57.64 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... | [more] |
KAA0037987.1 | 1.1e-28 | 39.91 | hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa] | [more] |
KAA0038012.1 | 4.6e-27 | 39.91 | hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK0220... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CGG1 | 6.3e-38 | 62.76 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3BP86 | 1.8e-32 | 57.64 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5A7T8R0 | 5.3e-29 | 39.91 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BVE5 | 2.2e-27 | 39.91 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1HRH7 | 1.4e-21 | 50.38 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |