Bhi03G001894 (gene) Wax gourd (B227) v1

Overview
NameBhi03G001894
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Locationchr3: 52227072 .. 52227518 (-)
RNA-Seq ExpressionBhi03G001894
SyntenyBhi03G001894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTGATTAATCCTTCAAATGTGTTTTTCGGAGCTTGTGCTCTCATACTCTTTGGGATGCATTCTACATACTATCGATCAGATGCTAGAAATATTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTGTCAAAAGAGGTACGAATTCCACCATCTGGACCGAATCAAAGAGCTTCACACAATCCACCTCCTTCACCACATTTTCTACCAGTCATTTTACATAAGGAATCTAGGATCAATTTTGGAATATTACCAAAACGCGTACATATTCCTCCATCTGGGCCGAGTAAAAAAACTTCAGACTATCCACCACCTCCACCTCATTCGCCTTCTATTATTTTAAATAAAGAATCTAAGTTTAATTTTGTCATGTATCCTAGAACACCTATTCCACCATCAACTGCAAATGGACGAGTGCCATTATGA

mRNA sequence

ATGATGTTGATTAATCCTTCAAATGTGTTTTTCGGAGCTTGTGCTCTCATACTCTTTGGGATGCATTCTACATACTATCGATCAGATGCTAGAAATATTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTGTCAAAAGAGGTACGAATTCCACCATCTGGACCGAATCAAAGAGCTTCACACAATCCACCTCCTTCACCACATTTTCTACCAGTCATTTTACATAAGGAATCTAGGATCAATTTTGGAATATTACCAAAACGCGTACATATTCCTCCATCTGGGCCGAGTAAAAAAACTTCAGACTATCCACCACCTCCACCTCATTCGCCTTCTATTATTTTAAATAAAGAATCTAAGTTTAATTTTGTCATGTATCCTAGAACACCTATTCCACCATCAACTGCAAATGGACGAGTGCCATTATGA

Coding sequence (CDS)

ATGATGTTGATTAATCCTTCAAATGTGTTTTTCGGAGCTTGTGCTCTCATACTCTTTGGGATGCATTCTACATACTATCGATCAGATGCTAGAAATATTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTGTCAAAAGAGGTACGAATTCCACCATCTGGACCGAATCAAAGAGCTTCACACAATCCACCTCCTTCACCACATTTTCTACCAGTCATTTTACATAAGGAATCTAGGATCAATTTTGGAATATTACCAAAACGCGTACATATTCCTCCATCTGGGCCGAGTAAAAAAACTTCAGACTATCCACCACCTCCACCTCATTCGCCTTCTATTATTTTAAATAAAGAATCTAAGTTTAATTTTGTCATGTATCCTAGAACACCTATTCCACCATCAACTGCAAATGGACGAGTGCCATTATGA

Protein sequence

MMLINPSNVFFGACALILFGMHSTYYRSDARNIVVVDQDYVAPPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRVHIPPSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPRTPIPPSTANGRVPL
Homology
BLAST of Bhi03G001894 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 8.7e-35
Identity = 85/177 (48.02%), Postives = 112/177 (63.28%), Query Frame = 0

Query: 1   MMLINPSNVFFGACALILFGMHSTYYRSDARNIVVVDQ---------------------- 60
           M+ I+ SNVFFGACA I  G+HST Y++DA+N+ VV++                      
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  ---------DYVAPPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFG 120
                      +APPF+LGILSKE R+PPSG +Q  S NPPP PH + +ILHKESRINF 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 ILPKRVHIPPSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPRT-PIPPSTANGR 146
           +L K   IPPSGPS++TS+ PPPPPH+ S+IL+K+   NF + P++  IPPS  + R
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKR 177

BLAST of Bhi03G001894 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 5.1e-27
Identity = 79/171 (46.20%), Postives = 100/171 (58.48%), Query Frame = 0

Query: 7   SNVFFGACALILFGMHSTYYRSDARNIVVVDQDY-------------------------- 66
           +N+FF ACALI  G+H   Y ++A+   VVD+D                           
Sbjct: 6   TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKP 65

Query: 67  -----VAPPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRV 126
                +APPFSLGILSK +R PPSG +Q  S+N PPSPH  P+ILHKES +NFGILPK V
Sbjct: 66  KKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFGILPKGV 125

Query: 127 HIPPSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
            IPPSGPS++TSD PPP  +  SI   KES+  + + P+   IPPS  + R
Sbjct: 126 RIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKR 172

BLAST of Bhi03G001894 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25
Identity = 62/101 (61.39%), Postives = 76/101 (75.25%), Query Frame = 0

Query: 46  SLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRVHIPPSGPSKK 105
           + G+L K V IPPSGP+QR S  PPP PH    IL+ +S+INFG+LPK V IPPSGPS++
Sbjct: 204 NFGMLPKGVPIPPSGPSQRTSDYPPPPPHASSFILNTQSKINFGMLPKGVPIPPSGPSQR 263

Query: 106 TSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
           TSDYPPPPPH+ S+ILN +SK NF M P+  PIPPS  + R
Sbjct: 264 TSDYPPPPPHASSVILNTQSKINFGMLPKGVPIPPSGPSQR 304

BLAST of Bhi03G001894 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-24
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0

Query: 42  APPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRVHIPPSG 101
           +P    G+L K V IPPS P+QR S  PPP P    +IL+K S+IN G+LP+ V IPPSG
Sbjct: 236 SPSLVFGMLPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSG 295

Query: 102 PSKKTSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
           PS++TSDYPPPPPH+ S+ILNK+SK NF M P+  PIPPS  + R
Sbjct: 296 PSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQR 340

BLAST of Bhi03G001894 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18
Identity = 73/176 (41.48%), Postives = 94/176 (53.41%), Query Frame = 0

Query: 2   MLINPSNVFFGACALILFGMHSTYYRSDARNIVVVDQD------------YVAPP----- 61
           M+   SN+ F  CA++L G+H   Y+++ RN+  V +D             + P      
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 62  --------------FSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGI 121
                         F  GI SK+VRIPPSGP+QR+S + PPSP    +IL KESRINFGI
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSS-DSPPSP---SMILPKESRINFGI 120

Query: 122 LPKRVHIPPSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
           LPK   IPPSGPS++ SD P P    PS  L+K S   F M P+   IPPS  + R
Sbjct: 121 LPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKR 168

BLAST of Bhi03G001894 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.5e-27
Identity = 79/171 (46.20%), Postives = 100/171 (58.48%), Query Frame = 0

Query: 7   SNVFFGACALILFGMHSTYYRSDARNIVVVDQDY-------------------------- 66
           +N+FF ACALI  G+H   Y ++A+   VVD+D                           
Sbjct: 6   TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKP 65

Query: 67  -----VAPPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRV 126
                +APPFSLGILSK +R PPSG +Q  S+N PPSPH  P+ILHKES +NFGILPK V
Sbjct: 66  KKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFGILPKGV 125

Query: 127 HIPPSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
            IPPSGPS++TSD PPP  +  SI   KES+  + + P+   IPPS  + R
Sbjct: 126 RIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKR 172

BLAST of Bhi03G001894 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.8e-25
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0

Query: 42  APPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRVHIPPSG 101
           +P    G+L K V IPPS P+QR S  PPP P    +IL+K S+IN G+LP+ V IPPSG
Sbjct: 236 SPSLVFGMLPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSG 295

Query: 102 PSKKTSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
           PS++TSDYPPPPPH+ S+ILNK+SK NF M P+  PIPPS  + R
Sbjct: 296 PSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQR 340

BLAST of Bhi03G001894 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.2e-19
Identity = 73/176 (41.48%), Postives = 94/176 (53.41%), Query Frame = 0

Query: 2   MLINPSNVFFGACALILFGMHSTYYRSDARNIVVVDQD------------YVAPP----- 61
           M+   SN+ F  CA++L G+H   Y+++ RN+  V +D             + P      
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 62  --------------FSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGI 121
                         F  GI SK+VRIPPSGP+QR+S + PPSP    +IL KESRINFGI
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSS-DSPPSP---SMILPKESRINFGI 120

Query: 122 LPKRVHIPPSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPR-TPIPPSTANGR 146
           LPK   IPPSGPS++ SD P P    PS  L+K S   F M P+   IPPS  + R
Sbjct: 121 LPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKR 168

BLAST of Bhi03G001894 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0

Query: 41  VAPPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRVHIPPS 100
           +APPFSLGILSK+VR PPSG +QR   NP   PH +P+ILHK+SRI FGILPK VH+P S
Sbjct: 167 LAPPFSLGILSKDVRTPPSGSSQRTLDNPSLPPHVVPIILHKKSRIEFGILPKGVHVPSS 226

Query: 101 GPSKKT 107
           GPS +T
Sbjct: 227 GPSVRT 232

BLAST of Bhi03G001894 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.7e-16
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0

Query: 41  VAPPFSLGILSKEVRIPPSGPNQRASHNPPPSPHFLPVILHKESRINFGILPKRVHIPPS 100
           +APPFSLGIL K+VR PP G +QR   NP P PH +P+ILHK+S+I FGILPK V +PPS
Sbjct: 174 LAPPFSLGILLKDVRTPPFGSSQRTLDNPSPPPHAVPIILHKKSKIKFGILPKGVRVPPS 233

Query: 101 GPSKKT 107
           GPS +T
Sbjct: 234 GPSVRT 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038882352.18.7e-3548.02uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAA0040932.15.1e-2746.20proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
KAG6603169.12.8e-2561.39hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022967687.11.8e-2458.10actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima][more]
KAA0043502.11.5e-1841.48proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... [more]
Match NameE-valueIdentityDescription
A0A5D3CGG12.5e-2746.20Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1HRH78.8e-2558.10actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A5D3BP867.2e-1941.48Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BVE51.2e-1668.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T8R05.7e-1665.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001894Bhi03M001894mRNA