Bhi03G001890 (gene) Wax gourd (B227) v1

Overview
NameBhi03G001890
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Locationchr3: 52205184 .. 52205630 (-)
RNA-Seq ExpressionBhi03G001890
SyntenyBhi03G001890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTGCTTAATCCTTCAAATGTATTTTTCGGAGCTTGTGCTCTCATACTCCTTGGGATGCATTGTACATACTATCGAGCAGATGCTAGAAATATTGTTGTAGTCAATCAAGACTATGTAGCTCCACCTTTCAGCTTGGTAATACTATCAAAAGAGGGACGGATTCCTCCGTCTGGACCAAGTCAAAGAACTTCAGACAATCCACCTCCCTTACCACATTTCCCACCCGTCATTTTACATAAGGAATCTAGGATCAATTTTGGAATATTACCAAAAGGTGTGCATATTCCTCCATCTGGGCCGAGTAAAGAAACTTCAGAGTATCCACCGCCTCCACCTCATTCTCCTTCTATTATTTTAAAGAAAGAATATAAGTTTAATTTTGTCATATATCCTCGAACACCTGTTCCACCATCTACTGGAAATGGACGAGTGCCATTATGA

mRNA sequence

ATGATGTTGCTTAATCCTTCAAATGTATTTTTCGGAGCTTGTGCTCTCATACTCCTTGGGATGCATTGTACATACTATCGAGCAGATGCTAGAAATATTGTTGTAGTCAATCAAGACTATGTAGCTCCACCTTTCAGCTTGGTAATACTATCAAAAGAGGGACGGATTCCTCCGTCTGGACCAAGTCAAAGAACTTCAGACAATCCACCTCCCTTACCACATTTCCCACCCGTCATTTTACATAAGGAATCTAGGATCAATTTTGGAATATTACCAAAAGGTGTGCATATTCCTCCATCTGGGCCGAGTAAAGAAACTTCAGAGTATCCACCGCCTCCACCTCATTCTCCTTCTATTATTTTAAAGAAAGAATATAAGTTTAATTTTGTCATATATCCTCGAACACCTGTTCCACCATCTACTGGAAATGGACGAGTGCCATTATGA

Coding sequence (CDS)

ATGATGTTGCTTAATCCTTCAAATGTATTTTTCGGAGCTTGTGCTCTCATACTCCTTGGGATGCATTGTACATACTATCGAGCAGATGCTAGAAATATTGTTGTAGTCAATCAAGACTATGTAGCTCCACCTTTCAGCTTGGTAATACTATCAAAAGAGGGACGGATTCCTCCGTCTGGACCAAGTCAAAGAACTTCAGACAATCCACCTCCCTTACCACATTTCCCACCCGTCATTTTACATAAGGAATCTAGGATCAATTTTGGAATATTACCAAAAGGTGTGCATATTCCTCCATCTGGGCCGAGTAAAGAAACTTCAGAGTATCCACCGCCTCCACCTCATTCTCCTTCTATTATTTTAAAGAAAGAATATAAGTTTAATTTTGTCATATATCCTCGAACACCTGTTCCACCATCTACTGGAAATGGACGAGTGCCATTATGA

Protein sequence

MMLLNPSNVFFGACALILLGMHCTYYRADARNIVVVNQDYVAPPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFGILPKGVHIPPSGPSKETSEYPPPPPHSPSIILKKEYKFNFVIYPRTPVPPSTGNGRVPL
Homology
BLAST of Bhi03G001890 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-34
Identity = 87/172 (50.58%), Postives = 107/172 (62.21%), Query Frame = 0

Query: 1   MMLLNPSNVFFGACALILLGMHCTYYRADARNIVVVNQ---------------------- 60
           M+ ++ SNVFFGACA I LG+H T Y+ DA+N+ VV +                      
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  ---------DYVAPPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFG 120
                      +APPF+L ILSKE R+PPSG SQ TSDNPPP PH   +ILHKESRINF 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 ILPKGVHIPPSGPSKETSEYPPPPPHSPSIILKKEYKFNFVIYPRT-PVPPS 141
           +L KG  IPPSGPS+ TSE PPPPPH+ S+IL K+   NF I P++  +PPS
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPS 172

BLAST of Bhi03G001890 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-24
Identity = 77/166 (46.39%), Postives = 95/166 (57.23%), Query Frame = 0

Query: 7   SNVFFGACALILLGMHCTYYRADARNIVVVNQDY-------------------------- 66
           +N+FF ACALI LG+H   Y  +A+   VV++D                           
Sbjct: 6   TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKP 65

Query: 67  -----VAPPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFGILPKGV 126
                +APPFSL ILSK  R PPSG SQ TS+NPP  PH  P+ILHKES +NFGILPKGV
Sbjct: 66  KKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPS-PHVAPIILHKESMVNFGILPKGV 125

Query: 127 HIPPSGPSKETSEYPPPPPHSPSIILKKEYKFNFVIYPR-TPVPPS 141
            IPPSGPS+ TS+ PPP  +  SI   KE +  + I P+   +PPS
Sbjct: 126 RIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPS 167

BLAST of Bhi03G001890 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23
Identity = 61/99 (61.62%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 43  PPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFGILPKGVHIPPSGP 102
           PP  L +L K   I PSGPSQRTSD PPP P    VIL K+S+INFG+LPKGV IPPSGP
Sbjct: 77  PPVVLRMLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGP 136

Query: 103 SKETSEYPPPPPHSPSIILKKEYKFNFVIYPR-TPVPPS 141
           S+ TS+YPPPPP + S+IL K+ K NF + P+  P+PPS
Sbjct: 137 SQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPPS 175

BLAST of Bhi03G001890 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-22
Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 39  DYVAPP--FSLVILSKEGR-----------IPPSGPSQRTSDNPPPLPHFPPVILHKESR 98
           DY  PP   S +IL+K  +           IPPSGPSQRTSD PPP PH   VIL+K+S+
Sbjct: 261 DYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSK 320

Query: 99  INFGILPKGVHIPPSGPSKETSEYPPPPPHSPSIILKKEYKFNFVIYPR-TPVPP 140
           INFG+LPKGV IPPSGPS+ TS YPPPPP + S+IL K+ K    + PR  P+PP
Sbjct: 321 INFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYLGMLPRGVPIPP 375

BLAST of Bhi03G001890 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-18
Identity = 71/185 (38.38%), Postives = 88/185 (47.57%), Query Frame = 0

Query: 2   MLLNPSNVFFGACALILLGMHCTYYRADARNIVVVNQD------------YVAPP----F 61
           M+   SN+ F  CA++LLG+H   Y+ + RN+  V +D             + P     F
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 62  SLV---------------ILSKEGRIPPSGPSQRTSDNPP-------------------- 121
           SL                I SK+ RIPPSGPSQR+SD+PP                    
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSPSMILPKESRINFGILPKG 120

BLAST of Bhi03G001890 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 77/166 (46.39%), Postives = 95/166 (57.23%), Query Frame = 0

Query: 7   SNVFFGACALILLGMHCTYYRADARNIVVVNQDY-------------------------- 66
           +N+FF ACALI LG+H   Y  +A+   VV++D                           
Sbjct: 6   TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKP 65

Query: 67  -----VAPPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFGILPKGV 126
                +APPFSL ILSK  R PPSG SQ TS+NPP  PH  P+ILHKES +NFGILPKGV
Sbjct: 66  KKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPS-PHVAPIILHKESMVNFGILPKGV 125

Query: 127 HIPPSGPSKETSEYPPPPPHSPSIILKKEYKFNFVIYPR-TPVPPS 141
            IPPSGPS+ TS+ PPP  +  SI   KE +  + I P+   +PPS
Sbjct: 126 RIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPS 167

BLAST of Bhi03G001890 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.8e-23
Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 39  DYVAPP--FSLVILSKEGR-----------IPPSGPSQRTSDNPPPLPHFPPVILHKESR 98
           DY  PP   S +IL+K  +           IPPSGPSQRTSD PPP PH   VIL+K+S+
Sbjct: 261 DYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSK 320

Query: 99  INFGILPKGVHIPPSGPSKETSEYPPPPPHSPSIILKKEYKFNFVIYPR-TPVPP 140
           INFG+LPKGV IPPSGPS+ TS YPPPPP + S+IL K+ K    + PR  P+PP
Sbjct: 321 INFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYLGMLPRGVPIPP 375

BLAST of Bhi03G001890 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18
Identity = 71/185 (38.38%), Postives = 88/185 (47.57%), Query Frame = 0

Query: 2   MLLNPSNVFFGACALILLGMHCTYYRADARNIVVVNQD------------YVAPP----F 61
           M+   SN+ F  CA++LLG+H   Y+ + RN+  V +D             + P     F
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 62  SLV---------------ILSKEGRIPPSGPSQRTSDNPP-------------------- 121
           SL                I SK+ RIPPSGPSQR+SD+PP                    
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSPSMILPKESRINFGILPKG 120

BLAST of Bhi03G001890 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-16
Identity = 47/66 (71.21%), Postives = 52/66 (78.79%), Query Frame = 0

Query: 41  VAPPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFGILPKGVHIPPS 100
           +APPFSL ILSK+ R PPSG SQRT DNP   PH  P+ILHK+SRI FGILPKGVH+P S
Sbjct: 167 LAPPFSLGILSKDVRTPPSGSSQRTLDNPSLPPHVVPIILHKKSRIEFGILPKGVHVPSS 226

Query: 101 GPSKET 107
           GPS  T
Sbjct: 227 GPSVRT 232

BLAST of Bhi03G001890 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.8e-16
Identity = 45/66 (68.18%), Postives = 51/66 (77.27%), Query Frame = 0

Query: 41  VAPPFSLVILSKEGRIPPSGPSQRTSDNPPPLPHFPPVILHKESRINFGILPKGVHIPPS 100
           +APPFSL IL K+ R PP G SQRT DNP P PH  P+ILHK+S+I FGILPKGV +PPS
Sbjct: 174 LAPPFSLGILLKDVRTPPFGSSQRTLDNPSPPPHAVPIILHKKSKIKFGILPKGVRVPPS 233

Query: 101 GPSKET 107
           GPS  T
Sbjct: 234 GPSVRT 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038882352.13.3e-3450.58uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAA0040932.12.4e-2446.39proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
KAG6603169.12.0e-2361.62hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022967687.11.0e-2255.65actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima][more]
KAA0043502.14.3e-1838.38proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... [more]
Match NameE-valueIdentityDescription
A0A5D3CGG11.2e-2446.39Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1HRH74.8e-2355.65actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A5D3BP862.1e-1838.38Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BVE52.0e-1671.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T8R09.8e-1668.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001890Bhi03M001890mRNA