Bhi03G001094 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G001094
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Protein of unknown function (DUF3511)
Location	chr3: 29728294 .. 29728551 (+)
RNA-Seq Expression	Bhi03G001094
Synteny	Bhi03G001094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAAGCAAAACATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAGTCAACAAGGAAGATGTGGCCAATCCAGAACTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAACCAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA

mRNA sequence

ATGGAGAGAAGCAAAACATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAGTCAACAAGGAAGATGTGGCCAATCCAGAACTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAACCAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA

Coding sequence (CDS)

ATGGAGAGAAGCAAAACATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAGTCAACAAGGAAGATGTGGCCAATCCAGAACTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAACCAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA

Protein sequence

MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD

Homology

[Close]

BLAST of Bhi03G001094 vs. TAIR 10
Match: AT4G09890.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-13
Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDN-PKSYSFNGTVNKEDVANPELKRRQRVATYNMYSM 60
          M+ SK+++  YS ++    FG++ N   SY+FNG     D   PE+KR++RVA+YN+++ 
Sbjct: 2  MKGSKSYT-EYSSSFSTDEFGYDQNRSNSYNFNGPCINTD---PEMKRKKRVASYNLFAT 61

Query: 61 EGKLKKSLRTSFKWIKNKFS 80
          E KLK +L+ SFKWIKNKFS
Sbjct: 62 EEKLKSTLKNSFKWIKNKFS 77

[Close]

BLAST of Bhi03G001094 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.1 bits (131), Expect = 3.3e-08
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 10  SYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSLRT 69
           SYS +YG       D  K  S         + +PEL+R++RVA+Y MY +EGK+K S R 
Sbjct: 30  SYSASYGTRENNIYDVKKEKSI-ARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRN 89

Query: 70  SFKWIKNKFSHSFY 84
           SF+W+K +++   Y
Sbjct: 90  SFRWLKQRYTQVVY 102

[Close]

BLAST of Bhi03G001094 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 10  SYSKAYGD--VRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSL 69
           SYS +Y D   R   + NPK    + + +     +P+L+R++RV +Y  Y++EGKLK S 
Sbjct: 42  SYSTSYTDYPTRIPEDQNPKK-GRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSF 101

Query: 70  RTSFKWIKNK 78
           R SFKWIK+K
Sbjct: 102 RKSFKWIKDK 110

[Close]

BLAST of Bhi03G001094 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 51.2 bits (121), Expect = 4.7e-07
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 26  PKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSLRTSFKWIK 76
           P+  S + T+ K    +PE+KR++RVA Y +YS EGK+K +LR S+KWIK
Sbjct: 65  PRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIK 114

[Close]

BLAST of Bhi03G001094 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.1 bits (113), Expect = 4.0e-06
Identity = 18/37 (48.65%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 44  ELKRRQRVATYNMYSMEGKLKKSLRTSFKWIKNKFSH 81
           E KR++R+ATY  Y++EGK+K +++  F WIK+++SH
Sbjct: 70  ETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSH 106

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: KAE8647476.1 (hypothetical protein Csa_003778 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 5.9e-36
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1   MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSME 60
           MERSK+ SGSYSKAYGDVRFGFEDNPKSYSFNGT+ KEDVAN ELKRRQRVATYNMYSME
Sbjct: 65  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSME 124

Query: 61  GKLKKSLRTSFKWIKNKFSHSFYDD 86
           GKLKKSLR SFKWIKNK SHSFYDD
Sbjct: 125 GKLKKSLRNSFKWIKNKISHSFYDD 149

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: TYK12983.1 (hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 9.4e-34
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSME 60
          MERSK+ SGSYSKAYGDVRFGFEDNPKSYSF+GTV KEDV N ELKRRQRVATYNMYSME
Sbjct: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSME 61

Query: 61 GKLKKSLRTSFKWIKNKFSHSFYD 85
          GKLKKSLR SFKWIKNK SHSFY+
Sbjct: 62 GKLKKSLRNSFKWIKNKISHSFYN 85

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: PRQ49076.1 (hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKED---------VANPELKRRQRV 60
          ME+SK+FSG YS AY + RFGFED PKSYSFNG V+K +          +NPEL+RR+RV
Sbjct: 1  MEKSKSFSGYYSTAYTEARFGFEDRPKSYSFNGPVSKVEGPSSASGSGNSNPELERRKRV 60

Query: 61 ATYNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          A YNMY+MEGK K SLR SFKWIK KF  +FYD+
Sbjct: 61 ANYNMYTMEGKFKSSLRNSFKWIKGKFVDNFYDE 94

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: EXB64484.1 (hypothetical protein L484_006721 [Morus notabilis])

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNG-TVNKED-----VANPELKRRQRVATY 60
          M+RSK+  G YS  YGD RFGFED  KSYSFNG +V  ED      +NPE+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YD+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDE 91

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: PON52269.1 (hypothetical protein TorRG33x02_308860 [Trema orientale])

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-21
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNK------EDVANPELKRRQRVATY 60
          MERSK+  G YS  YGD RFGFED  KSYSFNG  ++          NPE+KRR+RVA Y
Sbjct: 1  MERSKSLPGHYSSLYGDGRFGFEDRSKSYSFNGPSSQAADDEFASSGNPEMKRRKRVAAY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YDD
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDD 91

[Close]

BLAST of Bhi03G001094 vs. ExPASy TrEMBL
Match: A0A0A0KFC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-36
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSME 60
          MERSK+ SGSYSKAYGDVRFGFEDNPKSYSFNGT+ KEDVAN ELKRRQRVATYNMYSME
Sbjct: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSME 61

Query: 61 GKLKKSLRTSFKWIKNKFSHSFYDD 86
          GKLKKSLR SFKWIKNK SHSFYDD
Sbjct: 62 GKLKKSLRNSFKWIKNKISHSFYDD 86

[Close]

BLAST of Bhi03G001094 vs. ExPASy TrEMBL
Match: A0A5D3CM35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005800 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.6e-34
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSME 60
          MERSK+ SGSYSKAYGDVRFGFEDNPKSYSF+GTV KEDV N ELKRRQRVATYNMYSME
Sbjct: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSME 61

Query: 61 GKLKKSLRTSFKWIKNKFSHSFYD 85
          GKLKKSLR SFKWIKNK SHSFY+
Sbjct: 62 GKLKKSLRNSFKWIKNKISHSFYN 85

[Close]

BLAST of Bhi03G001094 vs. ExPASy TrEMBL
Match: A0A2P6RRL4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.2e-23
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKED---------VANPELKRRQRV 60
          ME+SK+FSG YS AY + RFGFED PKSYSFNG V+K +          +NPEL+RR+RV
Sbjct: 1  MEKSKSFSGYYSTAYTEARFGFEDRPKSYSFNGPVSKVEGPSSASGSGNSNPELERRKRV 60

Query: 61 ATYNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          A YNMY+MEGK K SLR SFKWIK KF  +FYD+
Sbjct: 61 ANYNMYTMEGKFKSSLRNSFKWIKGKFVDNFYDE 94

[Close]

BLAST of Bhi03G001094 vs. ExPASy TrEMBL
Match: W9RA26 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.2e-22
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNG-TVNKED-----VANPELKRRQRVATY 60
          M+RSK+  G YS  YGD RFGFED  KSYSFNG +V  ED      +NPE+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YD+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDE 91

[Close]

BLAST of Bhi03G001094 vs. ExPASy TrEMBL
Match: A0A2P5BU01 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_308860 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.9e-22
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNK------EDVANPELKRRQRVATY 60
          MERSK+  G YS  YGD RFGFED  KSYSFNG  ++          NPE+KRR+RVA Y
Sbjct: 1  MERSKSLPGHYSSLYGDGRFGFEDRSKSYSFNGPSSQAADDEFASSGNPEMKRRKRVAAY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YDD
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDD 91

The following BLAST results are available for this feature:

BLAST of Bhi03G001094 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09890.1	4.4e-13	47.50	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	3.3e-08	39.19	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	1.6e-07	42.86	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	4.7e-07	50.00	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	4.0e-06	48.65	Protein of unknown function (DUF3511)	[more]

BLAST of Bhi03G001094 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi03G001094 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647476.1	5.9e-36	91.76	hypothetical protein Csa_003778 [Cucumis sativus]	[more]
TYK12983.1	9.4e-34	89.29	hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]	[more]
PRQ49076.1	1.3e-22	62.77	hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]	[more]
EXB64484.1	1.1e-21	63.74	hypothetical protein L484_006721 [Morus notabilis]	[more]
PON52269.1	1.8e-21	62.64	hypothetical protein TorRG33x02_308860 [Trema orientale]	[more]

BLAST of Bhi03G001094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFC2	2.9e-36	91.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1	[more]
A0A5D3CM35	4.6e-34	89.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2P6RRL4	6.2e-23	62.77	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4...	[more]
W9RA26	5.2e-22	63.74	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1	[more]
A0A2P5BU01	8.9e-22	62.64	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_308860 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 42..82 e-value: 2.2E-22 score: 78.6
None	No IPR available	PANTHER	PTHR33193:SF41	SUBFAMILY NOT NAMED	coord: 1..80
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001094	Bhi03M001094	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0004518	nuclease activity