Bhi03G000960 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000960
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Beta-ketoacyl-[acyl-carrier-protein] synthase I
Location	chr3: 25615727 .. 25615909 (+)
RNA-Seq Expression	Bhi03G000960
Synteny	Bhi03G000960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTTGTCTCTATCTTTGGCAATGTTGTTGATACTGACTATGGTGAGTTGTTTTCTAATGAAAGTGGTATTACTCTTGTCGATCGCTTTGATGCTTCAAAGTTTCCTATTCGGTTCAGTGGGCAGAAGACTCTTAAGGATGCTGACCTCGGTGGAGATAAGCGCTCTAAGGTCATTTGA

mRNA sequence

ATGGGGCTTGTCTCTATCTTTGGCAATGTTGTTGATACTGACTATGGTGAGTTGTTTTCTAATGAAAGTGGTATTACTCTTGTCGATCGCTTTGATGCTTCAAAGTTTCCTATTCGGTTCAGTGGGCAGAAGACTCTTAAGGATGCTGACCTCGGTGGAGATAAGCGCTCTAAGGTCATTTGA

Coding sequence (CDS)

ATGGGGCTTGTCTCTATCTTTGGCAATGTTGTTGATACTGACTATGGTGAGTTGTTTTCTAATGAAAGTGGTATTACTCTTGTCGATCGCTTTGATGCTTCAAAGTTTCCTATTCGGTTCAGTGGGCAGAAGACTCTTAAGGATGCTGACCTCGGTGGAGATAAGCGCTCTAAGGTCATTTGA

Protein sequence

MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQKTLKDADLGGDKRSKVI

Homology

[Close]

BLAST of Bhi03G000960 vs. TAIR 10
Match: AT5G46290.1 (3-ketoacyl-acyl carrier protein synthase I )

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-12
Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VD  Y +L S ESGI+L+DRFDASKFP RF GQ                 
Sbjct: 68  MGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERR 127

[Close]

BLAST of Bhi03G000960 vs. TAIR 10
Match: AT5G46290.2 (3-ketoacyl-acyl carrier protein synthase I )

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-12
Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VD  Y +L S ESGI+L+DRFDASKFP RF GQ                 
Sbjct: 68  MGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERR 127

[Close]

BLAST of Bhi03G000960 vs. TAIR 10
Match: AT5G46290.3 (3-ketoacyl-acyl carrier protein synthase I )

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-12
Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VD  Y +L S ESGI+L+DRFDASKFP RF GQ                 
Sbjct: 68  MGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERR 127

[Close]

BLAST of Bhi03G000960 vs. ExPASy Swiss-Prot
Match: P52410 (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS1 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 6.3e-11
Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VD  Y +L S ESGI+L+DRFDASKFP RF GQ                 
Sbjct: 68  MGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERR 127

[Close]

BLAST of Bhi03G000960 vs. ExPASy Swiss-Prot
Match: P23902 (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare OX=4513 GN=KAS12 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-08
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 1  MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ 44
          MGL S+FG+ VDT Y  L + ESG+  +DRFDAS FP RF+GQ
Sbjct: 55 MGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQ 97

[Close]

BLAST of Bhi03G000960 vs. NCBI nr
Match: KAA0053963.1 (3-oxoacyl-(acyl-carrier-protein) synthase I [Cucumis melo var. makuwa] >TYK20647.1 3-oxoacyl-(acyl-carrier-protein) synthase I [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 6.5e-13
Identity = 47/90 (52.22%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG+TL+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLSGESGVTLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. NCBI nr
Match: XP_004147414.1 (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic [Cucumis sativus] >KGN65557.1 hypothetical protein Csa_019968 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 45/89 (50.56%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG+TL+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLSGESGVTLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. NCBI nr
Match: XP_008444105.1 (PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 45/89 (50.56%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG+TL+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLSGESGVTLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. NCBI nr
Match: XP_038895052.1 (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 9.4e-12
Identity = 44/89 (49.44%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG++L+DRFDASKFP RF GQ                 
Sbjct: 69  MGLVSVFGNDVDTYYDKLLSGESGVSLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 128

[Close]

BLAST of Bhi03G000960 vs. NCBI nr
Match: XP_038895053.1 (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 9.4e-12
Identity = 44/89 (49.44%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG++L+DRFDASKFP RF GQ                 
Sbjct: 69  MGLVSVFGNDVDTYYDKLLSGESGVSLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 128

[Close]

BLAST of Bhi03G000960 vs. ExPASy TrEMBL
Match: A0A5D3DAP3 (Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00310 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-13
Identity = 47/90 (52.22%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG+TL+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLSGESGVTLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. ExPASy TrEMBL
Match: A0A0A0LXL6 (Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Cucumis sativus OX=3659 GN=Csa_1G447400 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-12
Identity = 45/89 (50.56%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG+TL+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLSGESGVTLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. ExPASy TrEMBL
Match: A0A1S3BAD8 (Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Cucumis melo OX=3656 GN=LOC103487541 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-12
Identity = 45/89 (50.56%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L S ESG+TL+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLSGESGVTLIDRFDASKFPTRFGGQIRGFASQGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. ExPASy TrEMBL
Match: A0A5N6M4X3 (Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Mikania micrantha OX=192012 GN=E3N88_36835 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 44/89 (49.44%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L + ESGI L+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLAGESGIGLIDRFDASKFPTRFGGQIRGFKADGYIDGKNDRR 125

[Close]

BLAST of Bhi03G000960 vs. ExPASy TrEMBL
Match: A0A5N6M5W5 (PKS_KS domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_36836 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 44/89 (49.44%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 1   MGLVSIFGNVVDTDYGELFSNESGITLVDRFDASKFPIRFSGQ----------------- 60
           MGLVS+FGN VDT Y +L + ESGI L+DRFDASKFP RF GQ                 
Sbjct: 66  MGLVSVFGNDVDTYYDKLLAGESGIGLIDRFDASKFPTRFGGQIRGFKADGYIDGKNDRR 125

The following BLAST results are available for this feature:

BLAST of Bhi03G000960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46290.1	4.5e-12	43.82	3-ketoacyl-acyl carrier protein synthase I	[more]
AT5G46290.2	4.5e-12	43.82	3-ketoacyl-acyl carrier protein synthase I	[more]
AT5G46290.3	4.5e-12	43.82	3-ketoacyl-acyl carrier protein synthase I	[more]

BLAST of Bhi03G000960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52410	6.3e-11	43.82	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thalia...	[more]
P23902	3.8e-08	60.47	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare OX...	[more]

BLAST of Bhi03G000960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053963.1	6.5e-13	52.22	3-oxoacyl-(acyl-carrier-protein) synthase I [Cucumis melo var. makuwa] >TYK20647...	[more]
XP_004147414.1	3.2e-12	50.56	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic [Cucumis sativus] >KG...	[more]
XP_008444105.1	3.2e-12	50.56	PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic [Cucumis m...	[more]
XP_038895052.1	9.4e-12	49.44	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic isoform X1 [Benincasa...	[more]
XP_038895053.1	9.4e-12	49.44	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic isoform X2 [Benincasa...	[more]

BLAST of Bhi03G000960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAP3	3.1e-13	52.22	Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LXL6	1.6e-12	50.56	Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3BAD8	1.6e-12	50.56	Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5N6M4X3	1.7e-11	49.44	Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Mikania micrantha OX=192012 G...	[more]
A0A5N6M5W5	1.7e-11	49.44	PKS_KS domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_36836 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000794	Beta-ketoacyl synthase	PANTHER	PTHR11712	POLYKETIDE SYNTHASE-RELATED	coord: 1..43
None	No IPR available	PANTHER	PTHR11712:SF333	BNAA02G24400D PROTEIN	coord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000960	Bhi03M000960	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
molecular_function	GO:0016746	acyltransferase activity