Bhi03G000369 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000369
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	F-box protein
Location	chr3: 9665745 .. 9667412 (+)
RNA-Seq Expression	Bhi03G000369
Synteny	Bhi03G000369

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTTTTGAAAAGCGAGAAATCCCATCTTTTTCCACCATTATATAAGACAGAATATCGACAATTTTAAAGCAACTCCGTAGTTTGCTGAGTTTCCATATCAAGAGCAAAACCTTTCTTTGAAAAATCGAAACAGAAACAGAGAGATACACAGAAATATTCGAATCTCCGTAATCAGGTTCGTTTCGCTCCGGATTCATATTTACATTTCTTCCTTTTTCGACACTTTCAATCTGCTTTTGGAAACTGTTCTTATGCAAAATCTGCTTTGCTTCCATCAGATTTTTGTTAGGGTTTTTGAAGCTCTTCCAATCTCTTAGTTTATGGATTCTATTCTTTCTTTTTATGATTTTCTTCTGTTCTAAATGATTGATTATTGTTATTTTCCGCACGTTGATACAGATAAACGAAATAAGTTTAATTTAATTGAGTATTGAGAATTGACGATGGCGTTGGGAAAGAAGAGTGGTTGTTTGAAATCGAAAACCGTCGTCTCAGCTACCGATAAAGGGCTTGATTTCGGAGTGGTGAGATACACCCGTGGTTTAGGAAGGAAACGCGTCGTGATTTCTTACAATGAGGAAGATTCATCCATCGACTTGACGCCGAAGGCGCAGTCAAAGAGGCGCTGCAGCGTTGTTAGTACGGCGGTGGACTCCGATAGGTCTCTGCTCGAGGCTCTGCCACAGGAGATTCTGGTTAGTACTTCATAGAGATTGAAATCGCTTCGATAATTGCATCTTTCATTTTTGTATTTAGTCCCTTTTTTTTTATCATTGTTACCGAATTGATTTTCCCCCTTTCTTCTCTCCATTAGATTAAGGTTCTCTGTGGTGTGGAACATGACGATTTGAAACAGCTAGTCCGAGTTTCAAAAACAATCAGCGAAGCGGTAATTATCACTCAAATCATTATTTGTTTCCTTTCGTTTGATTAAACGATTCTAATTGATTTAGGGTTTCAATTGCATTTACAGACTTTGGTTGCAAAAGAATGGCATTTCGCTTACAACACTCCCTCAAAGGTCCGTACATTTCGCACCGCCATTGAATTAGACGATTCCAGCGATTACGACGAGATTGAAGCCCCATATGCTCCTCACACAAGACGAATCAGAACTCCATTAAACAGAAAGAAGCTGGCTGAGATATCCGTAGCCTTATTTGTCGAAGAAGAAAATCAATGGCCAAAGAAAAAATTGCCCATTGAGAGAGAGGTGTGAATTTTAACAACCCCGAGTGCTCTGTAAATACAATCTGTATTTATACTGTTGTAAGAAACACGATTATGGTAGTAGGAAGAAAGACGTAGTTGGGAATCTGAAATCTCAGATGTTGGTTGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGACTGTACATGTCAGAACATTCTCACTGACCAATTCTTCAAATCTTTCATTGAAGATGAAGATGGGGGGGGGGTTTCAAATTCATCTCTTTTTTTGTACAGGTATTACAGAGACAGATTGATAGGTAAATTCGTTGAGAAGGGTAGCATTTTGGTTTAGTCCCTTTCAAATTCTCTGATAAATTTGAACAGTAGATTGCTCTAATGTTCTCATTCATTGTTCTCATTCATTCTCTGTCTAATAAAAACGAACCATAATTTTCCTCGCAAATTCGTGTTCTAATGTTCTGCCC

mRNA sequence

CTAATTTTTGAAAAGCGAGAAATCCCATCTTTTTCCACCATTATATAAGACAGAATATCGACAATTTTAAAGCAACTCCGTAGTTTGCTGAGTTTCCATATCAAGAGCAAAACCTTTCTTTGAAAAATCGAAACAGAAACAGAGAGATACACAGAAATATTCGAATCTCCGTAATCAGATAAACGAAATAAGTTTAATTTAATTGAGTATTGAGAATTGACGATGGCGTTGGGAAAGAAGAGTGGTTGTTTGAAATCGAAAACCGTCGTCTCAGCTACCGATAAAGGGCTTGATTTCGGAGTGGTGAGATACACCCGTGGTTTAGGAAGGAAACGCGTCGTGATTTCTTACAATGAGGAAGATTCATCCATCGACTTGACGCCGAAGGCGCAGTCAAAGAGGCGCTGCAGCGTTGTTAGTACGGCGGTGGACTCCGATAGGTCTCTGCTCGAGGCTCTGCCACAGGAGATTCTGATTAAGGTTCTCTGTGGTGTGGAACATGACGATTTGAAACAGCTAGTCCGAGTTTCAAAAACAATCAGCGAAGCGACTTTGGTTGCAAAAGAATGGCATTTCGCTTACAACACTCCCTCAAAGGTCCGTACATTTCGCACCGCCATTGAATTAGACGATTCCAGCGATTACGACGAGATTGAAGCCCCATATGCTCCTCACACAAGACGAATCAGAACTCCATTAAACAGAAAGAAGCTGGCTGAGATATCCGTAGCCTTATTTGTCGAAGAAGAAAATCAATGGCCAAAGAAAAAATTGCCCATTGAGAGAGAGGTGTGAATTTTAACAACCCCGAGTGCTCTGTAAATACAATCTGTATTTATACTGTTGTAAGAAACACGATTATGGTAGTAGGAAGAAAGACGTAGTTGGGAATCTGAAATCTCAGATGTTGGTTGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGACTGTACATGTCAGAACATTCTCACTGACCAATTCTTCAAATCTTTCATTGAAGATGAAGATGGGGGGGGGGTTTCAAATTCATCTCTTTTTTTGTACAGGTATTACAGAGACAGATTGATAGGTAAATTCGTTGAGAAGGGTAGCATTTTGGTTTAGTCCCTTTCAAATTCTCTGATAAATTTGAACAGTAGATTGCTCTAATGTTCTCATTCATTGTTCTCATTCATTCTCTGTCTAATAAAAACGAACCATAATTTTCCTCGCAAATTCGTGTTCTAATGTTCTGCCC

Coding sequence (CDS)

ATGGCGTTGGGAAAGAAGAGTGGTTGTTTGAAATCGAAAACCGTCGTCTCAGCTACCGATAAAGGGCTTGATTTCGGAGTGGTGAGATACACCCGTGGTTTAGGAAGGAAACGCGTCGTGATTTCTTACAATGAGGAAGATTCATCCATCGACTTGACGCCGAAGGCGCAGTCAAAGAGGCGCTGCAGCGTTGTTAGTACGGCGGTGGACTCCGATAGGTCTCTGCTCGAGGCTCTGCCACAGGAGATTCTGATTAAGGTTCTCTGTGGTGTGGAACATGACGATTTGAAACAGCTAGTCCGAGTTTCAAAAACAATCAGCGAAGCGACTTTGGTTGCAAAAGAATGGCATTTCGCTTACAACACTCCCTCAAAGGTCCGTACATTTCGCACCGCCATTGAATTAGACGATTCCAGCGATTACGACGAGATTGAAGCCCCATATGCTCCTCACACAAGACGAATCAGAACTCCATTAAACAGAAAGAAGCTGGCTGAGATATCCGTAGCCTTATTTGTCGAAGAAGAAAATCAATGGCCAAAGAAAAAATTGCCCATTGAGAGAGAGGTGTGA

Protein sequence

MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKRRCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAYNTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWPKKKLPIEREV

Homology

[Close]

BLAST of Bhi03G000369 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.0e-30
Identity = 79/192 (41.15%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGV--VRYTRGLGRKRVVISYNEEDS---------S 60
           MAL K+   + S       ++ L+ G+  VR+TRGLGRKR++IS    +S          
Sbjct: 34  MALSKRGFVMTSNARFHGEEEELELGLGSVRFTRGLGRKRILISSCVRESLSRSAVEIPV 93

Query: 61  IDLTPKAQS-----KRRCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSK 120
           +  +P  +S     + R ++VS++  S++S LE LPQ++LI+V+CGV+H+DLK L  VSK
Sbjct: 94  VSESPPVKSSLKRQRSRITIVSSS-SSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSK 153

Query: 121 TISEATLVAKEWHFAYNTPSKVRTFRTAIELDDSSD----YDEIEAPYAPHTRRIRTPLN 173
           +I EA+LVAK  HFAY TP K R FR +I+L++ SD     D+IE P AP   R      
Sbjct: 154 SIREASLVAKTLHFAYTTPKKTRAFRNSIDLEEVSDSRHQEDDIEPPNAPRHYRWTKAKR 213

[Close]

BLAST of Bhi03G000369 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 82/186 (44.09%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 1   MALGKK-----SGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEE-DSSIDLTP 60
           MALGKK        L+ +  V     GL    V+Y RG GRKR++IS  +E + SI  +P
Sbjct: 1   MALGKKRIVTQKPNLRQRRDVDNGGLGLGLEFVQYKRGFGRKRILISSGDEMEDSIFTSP 60

Query: 61  KAQSKRRCSVVSTAVDSDRSL-LEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVA 120
               K+ C   +T+V   +S  LE LP +IL++++CGVEH+DLKQL  VSKTI EAT++A
Sbjct: 61  --VGKKLCDDKTTSVAEGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIA 120

Query: 121 KEWHFAYNTPSKVRTFRTA-----IELDDSSDYDEIEAPYAPHTRRIR-TPLNRKK-LAE 173
           K+ HFAY+TP K   F           D   D +EIEAP AP  +R R + +NR K  + 
Sbjct: 121 KQSHFAYSTPRKTSVFHHGRFGWDKPFDVEDDDEEIEAPGAPLQKRYRLSRINRNKDDSG 180

[Close]

BLAST of Bhi03G000369 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 74/158 (46.84%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 23  LDFGVVRYTRGLGRKRVVISYN--EEDSSIDLTPKAQSKRRCSVVSTAVDSDRSLLEALP 82
           L  G VR+TRGLGRKR++IS    E DS     P  ++   C          RSLLE L 
Sbjct: 19  LGLGFVRFTRGLGRKRILISKRAPENDSPPVKRPSHETTESC----------RSLLETLH 78

Query: 83  QEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAYNTPSKVRTFRTAIELDD--- 142
           Q+ILI+VLC V+H+DL  L RVSKTI +A + AK+ HF Y+TP K   FR AI + D   
Sbjct: 79  QDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYSTPKKRLPFRDAILILDSNS 138

Query: 143 --SSDYDEIEAPYAPHTRRIRTPLNRKK-LAEISVALF 173
             SS  DE+E P AP  RR    +NR+  L++IS+ LF
Sbjct: 139 NSSSQDDEMEPPNAPIRRRF---INRESDLSKISMVLF 163

[Close]

BLAST of Bhi03G000369 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.8e-21
Identity = 82/232 (35.34%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 1   MALGKK-----SGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEE-DSSIDLTP 60
           MALGKK        L+ +  V     GL    V+Y RG GRKR++IS  +E + SI  +P
Sbjct: 1   MALGKKRIVTQKPNLRQRRDVDNGGLGLGLEFVQYKRGFGRKRILISSGDEMEDSIFTSP 60

Query: 61  KAQSKRRCSVVSTAVDSDRSL-LEALPQEIL----------------------------- 120
               K+ C   +T+V   +S  LE LP +IL                             
Sbjct: 61  --VGKKLCDDKTTSVAEGQSRELEDLPLDILLRVFVNSASVNQIELKVESFLFSEIQNRN 120

Query: 121 -----------------IKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAYNTPSKVR 173
                            ++++CGVEH+DLKQL  VSKTI EAT++AK+ HFAY+TP K  
Sbjct: 121 GNEKMFNFFHIWKTFVIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKTS 180

[Close]

BLAST of Bhi03G000369 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 35/122 (28.69%), Postives = 66/122 (54.10%), Query Frame = 0


Query: 74  SLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAYNTPSKVR----TF 133
           S LE+LP ++L+K++C + HD LK +  VS+ I  AT++A+++HF Y TP + R      
Sbjct: 160 SQLESLPMDLLVKIVCHLHHDQLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRV 219

Query: 134 RTAIELD------DSSDYDEIEAPYAPHT-RRIRTPLNRKKLAEIS--VALFVEEENQWP 183
            T + ++         +   + +P+ P   +    P +R KLAE+    A+  +++  +P
Sbjct: 220 MTPVPINRWPFRRGDGNPTMVSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFP 279

[Close]

BLAST of Bhi03G000369 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 4.3e-29
Identity = 79/192 (41.15%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGV--VRYTRGLGRKRVVISYNEEDS---------S 60
           MAL K+   + S       ++ L+ G+  VR+TRGLGRKR++IS    +S          
Sbjct: 34  MALSKRGFVMTSNARFHGEEEELELGLGSVRFTRGLGRKRILISSCVRESLSRSAVEIPV 93

Query: 61  IDLTPKAQS-----KRRCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSK 120
           +  +P  +S     + R ++VS++  S++S LE LPQ++LI+V+CGV+H+DLK L  VSK
Sbjct: 94  VSESPPVKSSLKRQRSRITIVSSS-SSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSK 153

Query: 121 TISEATLVAKEWHFAYNTPSKVRTFRTAIELDDSSD----YDEIEAPYAPHTRRIRTPLN 173
           +I EA+LVAK  HFAY TP K R FR +I+L++ SD     D+IE P AP   R      
Sbjct: 154 SIREASLVAKTLHFAYTTPKKTRAFRNSIDLEEVSDSRHQEDDIEPPNAPRHYRWTKAKR 213

[Close]

BLAST of Bhi03G000369 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 82/186 (44.09%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 1   MALGKK-----SGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEE-DSSIDLTP 60
           MALGKK        L+ +  V     GL    V+Y RG GRKR++IS  +E + SI  +P
Sbjct: 1   MALGKKRIVTQKPNLRQRRDVDNGGLGLGLEFVQYKRGFGRKRILISSGDEMEDSIFTSP 60

Query: 61  KAQSKRRCSVVSTAVDSDRSL-LEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVA 120
               K+ C   +T+V   +S  LE LP +IL++++CGVEH+DLKQL  VSKTI EAT++A
Sbjct: 61  --VGKKLCDDKTTSVAEGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIA 120

Query: 121 KEWHFAYNTPSKVRTFRTA-----IELDDSSDYDEIEAPYAPHTRRIR-TPLNRKK-LAE 173
           K+ HFAY+TP K   F           D   D +EIEAP AP  +R R + +NR K  + 
Sbjct: 121 KQSHFAYSTPRKTSVFHHGRFGWDKPFDVEDDDEEIEAPGAPLQKRYRLSRINRNKDDSG 180

[Close]

BLAST of Bhi03G000369 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 74/158 (46.84%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 23  LDFGVVRYTRGLGRKRVVISYN--EEDSSIDLTPKAQSKRRCSVVSTAVDSDRSLLEALP 82
           L  G VR+TRGLGRKR++IS    E DS     P  ++   C          RSLLE L 
Sbjct: 19  LGLGFVRFTRGLGRKRILISKRAPENDSPPVKRPSHETTESC----------RSLLETLH 78

Query: 83  QEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAYNTPSKVRTFRTAIELDD--- 142
           Q+ILI+VLC V+H+DL  L RVSKTI +A + AK+ HF Y+TP K   FR AI + D   
Sbjct: 79  QDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYSTPKKRLPFRDAILILDSNS 138

Query: 143 --SSDYDEIEAPYAPHTRRIRTPLNRKK-LAEISVALF 173
             SS  DE+E P AP  RR    +NR+  L++IS+ LF
Sbjct: 139 NSSSQDDEMEPPNAPIRRRF---INRESDLSKISMVLF 163

[Close]

BLAST of Bhi03G000369 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 35/122 (28.69%), Postives = 66/122 (54.10%), Query Frame = 0


Query: 74  SLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAYNTPSKVR----TF 133
           S LE+LP ++L+K++C + HD LK +  VS+ I  AT++A+++HF Y TP + R      
Sbjct: 160 SQLESLPMDLLVKIVCHLHHDQLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRV 219

Query: 134 RTAIELD------DSSDYDEIEAPYAPHT-RRIRTPLNRKKLAEIS--VALFVEEENQWP 183
            T + ++         +   + +P+ P   +    P +R KLAE+    A+  +++  +P
Sbjct: 220 MTPVPINRWPFRRGDGNPTMVSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFP 279

[Close]

BLAST of Bhi03G000369 vs. NCBI nr
Match: XP_038880993.1 (F-box protein SKIP27 [Benincasa hispida])

HSP 1 Score: 374.0 bits (959), Expect = 7.6e-100
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR
Sbjct: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY
Sbjct: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP
Sbjct: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180

Query: 181 KKKLPIEREV 191
           KKKLPIEREV
Sbjct: 181 KKKLPIEREV 190

[Close]

BLAST of Bhi03G000369 vs. NCBI nr
Match: XP_008439907.1 (PREDICTED: F-box protein At4g05010-like [Cucumis melo] >KAA0052721.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 162/190 (85.26%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS NEEDSSIDLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCNEEDSSIDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RC+VVSTAV++DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTISEATL+AK+ HFAY
Sbjct: 61  RCNVVSTAVEADRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTISEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIEL+DSSD+DEIEAP A  TRR R+PLNRKKLAEISVALF EEE++WP
Sbjct: 121 STPSKVRAFRTAIELNDSSDFDEIEAPNARPTRRFRSPLNRKKLAEISVALFAEEEDEWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. NCBI nr
Match: TYK13104.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 162/190 (85.26%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS NEEDSSIDLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCNEEDSSIDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
            C+VVSTAV++DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTISEATL+AK+ HFAY
Sbjct: 61  HCNVVSTAVEADRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTISEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIELDDSSD+DEIEAP A  TRR R+PLNRKKLAEISVALF EEE++WP
Sbjct: 121 STPSKVRAFRTAIELDDSSDFDEIEAPNARPTRRFRSPLNRKKLAEISVALFAEEEDEWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. NCBI nr
Match: XP_004134730.1 (F-box protein At4g05010 [Cucumis sativus] >XP_031744056.1 F-box protein At4g05010 [Cucumis sativus] >KGN49188.1 hypothetical protein Csa_003153 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 4.2e-82
Identity = 160/190 (84.21%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS +EEDS  DLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RC+VVSTAV+ DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTI+EATL+AK+ HFAY
Sbjct: 61  RCNVVSTAVEDDRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIELDDSSD+DEIEAP A  TRR RTPLNRKKLAEIS+ALF EEE+QWP
Sbjct: 121 STPSKVRRFRTAIELDDSSDFDEIEAPNACPTRRFRTPLNRKKLAEISIALFAEEEDQWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. NCBI nr
Match: XP_022977983.1 (F-box protein SKIP27-like [Cucurbita maxima])

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75
Identity = 152/191 (79.58%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKKSGCLKSK+VVSA DK LDFGVVRY RGLGRKRVVIS N+EDSSIDLTPK  SKR
Sbjct: 1   MALGKKSGCLKSKSVVSAADKELDFGVVRYARGLGRKRVVISCNQEDSSIDLTPKTPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RCSVVST VD+  SLLE LPQEILI++LCG++HDDLKQLVRVSKTISEATL+AKEWHFAY
Sbjct: 61  RCSVVSTTVDAGWSLLEVLPQEILIRILCGLDHDDLKQLVRVSKTISEATLIAKEWHFAY 120

Query: 121 NTPSKVRTFRTAIELDDS-SDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQW 180
            TPSK+R FRT+IELDD+  D DEIEAP AP TRR R+PL+RKKLA+ISVALF EEE QW
Sbjct: 121 RTPSKIRAFRTSIELDDNFIDLDEIEAPDAPLTRRFRSPLSRKKLADISVALFAEEE-QW 180

Query: 181 PKKKLPIEREV 191
           P+KK  IE E+
Sbjct: 181 PRKKYAIETEM 190

[Close]

BLAST of Bhi03G000369 vs. ExPASy TrEMBL
Match: A0A5A7UGT0 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003340 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 162/190 (85.26%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS NEEDSSIDLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCNEEDSSIDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RC+VVSTAV++DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTISEATL+AK+ HFAY
Sbjct: 61  RCNVVSTAVEADRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTISEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIEL+DSSD+DEIEAP A  TRR R+PLNRKKLAEISVALF EEE++WP
Sbjct: 121 STPSKVRAFRTAIELNDSSDFDEIEAPNARPTRRFRSPLNRKKLAEISVALFAEEEDEWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. ExPASy TrEMBL
Match: A0A5D3CPZ7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007130 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 162/190 (85.26%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS NEEDSSIDLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCNEEDSSIDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
            C+VVSTAV++DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTISEATL+AK+ HFAY
Sbjct: 61  HCNVVSTAVEADRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTISEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIELDDSSD+DEIEAP A  TRR R+PLNRKKLAEISVALF EEE++WP
Sbjct: 121 STPSKVRAFRTAIELDDSSDFDEIEAPNARPTRRFRSPLNRKKLAEISVALFAEEEDEWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. ExPASy TrEMBL
Match: A0A1S3B0I0 (F-box protein At4g05010-like OS=Cucumis melo OX=3656 GN=LOC103484553 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 162/190 (85.26%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS NEEDSSIDLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCNEEDSSIDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RC+VVSTAV++DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTISEATL+AK+ HFAY
Sbjct: 61  RCNVVSTAVEADRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTISEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIEL+DSSD+DEIEAP A  TRR R+PLNRKKLAEISVALF EEE++WP
Sbjct: 121 STPSKVRAFRTAIELNDSSDFDEIEAPNARPTRRFRSPLNRKKLAEISVALFAEEEDEWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. ExPASy TrEMBL
Match: A0A0A0KI01 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516960 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82
Identity = 160/190 (84.21%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKK+GCLKSK+VVSA DKGLDFGVVRYTRGLGRKRVVIS +EEDS  DLTPKA SKR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RC+VVSTAV+ DRSLLEALPQEILI+VLCGVEHDDLKQL+RVSKTI+EATL+AK+ HFAY
Sbjct: 61  RCNVVSTAVEDDRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSHFAY 120

Query: 121 NTPSKVRTFRTAIELDDSSDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQWP 180
           +TPSKVR FRTAIELDDSSD+DEIEAP A  TRR RTPLNRKKLAEIS+ALF EEE+QWP
Sbjct: 121 STPSKVRRFRTAIELDDSSDFDEIEAPNACPTRRFRTPLNRKKLAEISIALFAEEEDQWP 180

Query: 181 KKKLPIEREV 191
           KKKLPI  E+
Sbjct: 181 KKKLPIWTEM 190

[Close]

BLAST of Bhi03G000369 vs. ExPASy TrEMBL
Match: A0A6J1IRQ4 (F-box protein SKIP27-like OS=Cucurbita maxima OX=3661 GN=LOC111478110 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.3e-76
Identity = 152/191 (79.58%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MALGKKSGCLKSKTVVSATDKGLDFGVVRYTRGLGRKRVVISYNEEDSSIDLTPKAQSKR 60
           MALGKKSGCLKSK+VVSA DK LDFGVVRY RGLGRKRVVIS N+EDSSIDLTPK  SKR
Sbjct: 1   MALGKKSGCLKSKSVVSAADKELDFGVVRYARGLGRKRVVISCNQEDSSIDLTPKTPSKR 60

Query: 61  RCSVVSTAVDSDRSLLEALPQEILIKVLCGVEHDDLKQLVRVSKTISEATLVAKEWHFAY 120
           RCSVVST VD+  SLLE LPQEILI++LCG++HDDLKQLVRVSKTISEATL+AKEWHFAY
Sbjct: 61  RCSVVSTTVDAGWSLLEVLPQEILIRILCGLDHDDLKQLVRVSKTISEATLIAKEWHFAY 120

Query: 121 NTPSKVRTFRTAIELDDS-SDYDEIEAPYAPHTRRIRTPLNRKKLAEISVALFVEEENQW 180
            TPSK+R FRT+IELDD+  D DEIEAP AP TRR R+PL+RKKLA+ISVALF EEE QW
Sbjct: 121 RTPSKIRAFRTSIELDDNFIDLDEIEAPDAPLTRRFRSPLSRKKLADISVALFAEEE-QW 180

Query: 181 PKKKLPIEREV 191
           P+KK  IE E+
Sbjct: 181 PRKKYAIETEM 190

The following BLAST results are available for this feature:

BLAST of Bhi03G000369 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21510.1	3.0e-30	41.15	F-box family protein	[more]
AT1G61340.1	2.4e-27	44.09	F-box family protein	[more]
AT4G05010.1	1.5e-24	46.84	F-box family protein	[more]
AT1G61340.2	9.8e-21	35.34	F-box family protein	[more]
AT4G35930.1	1.0e-09	28.69	F-box family protein	[more]

BLAST of Bhi03G000369 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65416	4.3e-29	41.15	F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2	[more]
Q8GX77	3.4e-26	44.09	F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1	[more]
Q9S9T6	2.1e-23	46.84	F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1	[more]
Q5XF11	1.4e-08	28.69	F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1	[more]

BLAST of Bhi03G000369 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880993.1	7.6e-100	100.00	F-box protein SKIP27 [Benincasa hispida]	[more]
XP_008439907.1	2.9e-83	85.26	PREDICTED: F-box protein At4g05010-like [Cucumis melo] >KAA0052721.1 F-box prote...	[more]
TYK13104.1	2.9e-83	85.26	F-box protein [Cucumis melo var. makuwa]	[more]
XP_004134730.1	4.2e-82	84.21	F-box protein At4g05010 [Cucumis sativus] >XP_031744056.1 F-box protein At4g0501...	[more]
XP_022977983.1	1.7e-75	79.58	F-box protein SKIP27-like [Cucurbita maxima]	[more]

BLAST of Bhi03G000369 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGT0	1.4e-83	85.26	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003340...	[more]
A0A5D3CPZ7	1.4e-83	85.26	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007130...	[more]
A0A1S3B0I0	1.4e-83	85.26	F-box protein At4g05010-like OS=Cucumis melo OX=3656 GN=LOC103484553 PE=4 SV=1	[more]
A0A0A0KI01	2.0e-82	84.21	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516960 PE=4 ...	[more]
A0A6J1IRQ4	8.3e-76	79.58	F-box protein SKIP27-like OS=Cucurbita maxima OX=3661 GN=LOC111478110 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34049:SF1	F-BOX PROTEIN SKIP27	coord: 5..176
None	No IPR available	PANTHER	PTHR34049	F-BOX PROTEIN SKIP27	coord: 5..176
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 73..123 score: 8.83511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000369	Bhi03M000369	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding