Bhi03G000366 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000366
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr3: 9580840 .. 9581643 (-)
RNA-Seq Expression	Bhi03G000366
Synteny	Bhi03G000366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAAAGTGAAAAAGTGGGGTTGGACTCATATCTGAAACGCTCCTCTTTCACATTATGAACTTTGTAATTAAATATAGAATTGAACAGATTTTGTAGGTTTGTTGGGTTGGTTTATAACATGGAATCTTACAGTTTTCAGAGAGTGGTGTGGTGGTGGGGACAAAGCAAAGCACCGCTGTCATGGCGCTTAACCTCTGATTCAACCATTTTATTCAAATAATATCTGCTTTATTCTGTCCCCTTCTCTCTTCTCTATATAAACCTTCATTTCCCACACCACTTTCAACTCATTCAAACTACTCTTCACATACTCACTTTCTAAATAGTATAAATCCTCCCGCCCCCTATCATTTCTCACTCACTGAAGATGGCCGGTTCCAGAAGCGACGACATCACCGGTGCCACCTACTCTCCCAGGTCTTCCGGCCGTCCCATTCCCAAGCGGGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACTCCGTTGCTTCAATTTTCTCCCCCACCACTCGTCGGACCTAGATTACACGGCGGCCAGCGGTGGCTCACTCACTGAACCGCCCGGCCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTCTTACCAGTTGAGTCAATGGAGAGTCGCACAGCTGTTTTGGGCCTTTGGTTTCCTTTGTATAAAAGCAGAGTTCTATTTTCTTTTTGTCAATTAATGCAAATTGGAGATTTGGTTCTCTATTTATGATTTTCTGCTCTTATTTTTCTTATTCGTCTTTTTTTAGTACAATAAAAAAAATTAAACATAATCGAAACATTTA

mRNA sequence

TGGTAAAGTGAAAAAGTGGGGTTGGACTCATATCTGAAACGCTCCTCTTTCACATTATGAACTTTGTAATTAAATATAGAATTGAACAGATTTTGTAGGTTTGTTGGGTTGGTTTATAACATGGAATCTTACAGTTTTCAGAGAGTGGTGTGGTGGTGGGGACAAAGCAAAGCACCGCTGTCATGGCGCTTAACCTCTGATTCAACCATTTTATTCAAATAATATCTGCTTTATTCTGTCCCCTTCTCTCTTCTCTATATAAACCTTCATTTCCCACACCACTTTCAACTCATTCAAACTACTCTTCACATACTCACTTTCTAAATAGTATAAATCCTCCCGCCCCCTATCATTTCTCACTCACTGAAGATGGCCGGTTCCAGAAGCGACGACATCACCGGTGCCACCTACTCTCCCAGGTCTTCCGGCCGTCCCATTCCCAAGCGGGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACTCCGTTGCTTCAATTTTCTCCCCCACCACTCGTCGGACCTAGATTACACGGCGGCCAGCGGTGGCTCACTCACTGAACCGCCCGGCCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTCTTACCAGTTGAGTCAATGGAGAGTCGCACAGCTGTTTTGGGCCTTTGGTTTCCTTTGTATAAAAGCAGAGTTCTATTTTCTTTTTGTCAATTAATGCAAATTGGAGATTTGGTTCTCTATTTATGATTTTCTGCTCTTATTTTTCTTATTCGTCTTTTTTTAGTACAATAAAAAAAATTAAACATAATCGAAACATTTA

Coding sequence (CDS)

ATGGCCGGTTCCAGAAGCGACGACATCACCGGTGCCACCTACTCTCCCAGGTCTTCCGGCCGTCCCATTCCCAAGCGGGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACTCCGTTGCTTCAATTTTCTCCCCCACCACTCGTCGGACCTAG

Protein sequence

MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRRT

Homology

[Close]

BLAST of Bhi03G000366 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima])

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1   MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 51
           M GSRSDDI+GATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

[Close]

BLAST of Bhi03G000366 vs. NCBI nr
Match: KAA0052718.1 (hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 7.1e-16
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRRT 53
          MAG RSD ITGA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSPTTRRT
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 81

[Close]

BLAST of Bhi03G000366 vs. NCBI nr
Match: KGN49191.1 (hypothetical protein Csa_004352 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-13
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRRT 53
          MA SR+  IT A YSPR+S RP PKRGQVKLGIMVGLAH+VASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

[Close]

BLAST of Bhi03G000366 vs. NCBI nr
Match: KAG2689810.1 (hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothetical protein I3842_09G159900 [Carya illinoinensis])

HSP 1 Score: 73.6 bits (179), Expect = 5.8e-10
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 2  AGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 51
          AG+RS  I G ++S R SGRPIPKRGQVKLGI+VGLAHSVASIFSP  R
Sbjct: 3  AGARSGMINGGSFSGRFSGRPIPKRGQVKLGIVVGLAHSVASIFSPRRR 51

[Close]

BLAST of Bhi03G000366 vs. NCBI nr
Match: KAB2082050.1 (hypothetical protein ES319_A05G172400v1 [Gossypium barbadense] >KAG4199711.1 hypothetical protein ERO13_A05G164200v2 [Gossypium hirsutum] >KJB53424.1 hypothetical protein B456_009G172100 [Gossypium raimondii] >MBA0807849.1 hypothetical protein [Gossypium harknessii] >TYH17228.1 hypothetical protein ES288_A05G176000v1 [Gossypium darwinii] >TYI27452.1 hypothetical protein ES332_A05G178500v1 [Gossypium tomentosum] >TYJ34542.1 hypothetical protein E1A91_A05G176000v1 [Gossypium mustelinum])

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-09
Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRR 52
          MAG+R + I G  YSPR +GRPIP+RGQVK+ I++G+AHS ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

[Close]

BLAST of Bhi03G000366 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1   MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 51
           M GSRSDDI+GATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

[Close]

BLAST of Bhi03G000366 vs. ExPASy TrEMBL
Match: A0A5A7UBX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003310 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-16
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRRT 53
          MAG RSD ITGA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSPTTRRT
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 81

[Close]

BLAST of Bhi03G000366 vs. ExPASy TrEMBL
Match: A0A0A0KN78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.3e-14
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRRT 53
          MA SR+  IT A YSPR+S RP PKRGQVKLGIMVGLAH+VASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

[Close]

BLAST of Bhi03G000366 vs. ExPASy TrEMBL
Match: A0A5J5VQ30 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRR 52
          MAG+R + I G  YSPR +GRPIP+RGQVK+ I++G+AHS ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

[Close]

BLAST of Bhi03G000366 vs. ExPASy TrEMBL
Match: A0A5D2UXY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MAGSRSDDITGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTRR 52
          MAG+R + I G  YSPR +GRPIP+RGQVK+ I++G+AHS ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

The following BLAST results are available for this feature:

BLAST of Bhi03G000366 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000366 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000366 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977341.1	2.2e-17	96.00	uncharacterized protein LOC111477692 [Cucurbita maxima]	[more]
KAA0052718.1	7.1e-16	88.46	hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]	[more]
KGN49191.1	1.9e-13	80.77	hypothetical protein Csa_004352 [Cucumis sativus]	[more]
KAG2689810.1	5.8e-10	75.51	hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothe...	[more]
KAB2082050.1	2.2e-09	62.75	hypothetical protein ES319_A05G172400v1 [Gossypium barbadense] >KAG4199711.1 hyp...	[more]

BLAST of Bhi03G000366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJM3	1.1e-17	96.00	uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692...	[more]
A0A5A7UBX7	3.4e-16	88.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KN78	9.3e-14	80.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1	[more]
A0A5J5VQ30	1.1e-09	62.75	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE...	[more]
A0A5D2UXY7	1.1e-09	62.75	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR36615	PROTEIN, PUTATIVE-RELATED	coord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000366	Bhi03M000366	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane