Bhi03G000173 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G000173
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	NAC domain-containing protein 83-like
Location	chr3: 4436436 .. 4436984 (+)
RNA-Seq Expression	Bhi03G000173
Synteny	Bhi03G000173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAGTACAACTTGCATGAGAGTGTGATCACATGTGGTTGTTCAGGTCTAAACTATGTATTGTGTCGAATTAGAAAGAATGAAAGACCCAAAAGAAAAGCATTGGAGATATGCAATATTCAACCTACGAAGAAGAGGGTTGTGGCACCTGAGATTCATGATACGAGGAAGATTAACCAAAGACGACCTACAAGAAAAGCAAACAAAATTCCGCCTCAGCAATTAGCCGAGCAGAGTGCCGTGACACCTAATATGGTATGCCACATGCCTTGTGATCCTAAAATGACCACCAACCAAATTCCTCATGATGTGTCCTACTTGGCTTTGATGACCACCAAGAAAGGTATTAGTGATATGCCTAAGCCTAAGATGATCATCAACCAAATTACTAGTGACATGCCTTATGCTCAAAATATGAACATCATGCCTCACATGCCTGAAATCACCACCGAAACTAATGACGAGATACAATGGAGTGAAATATTAAGTTTTGATTTCAATGAGGAAGATACTGGAATCACAAAATATCATATTCAACAAATTTAG

mRNA sequence

ATGCATGAGTACAACTTGCATGAGAGTGTGATCACATGTGGTTGTTCAGGTCTAAACTATGTATTGTGTCGAATTAGAAAGAATGAAAGACCCAAAAGAAAAGCATTGGAGATATGCAATATTCAACCTACGAAGAAGAGGGTTGTGGCACCTGAGATTCATGATACGAGGAAGATTAACCAAAGACGACCTACAAGAAAAGCAAACAAAATTCCGCCTCAGCAATTAGCCGAGCAGAGTGCCGTGACACCTAATATGGTATGCCACATGCCTTGTGATCCTAAAATGACCACCAACCAAATTCCTCATGATGTGTCCTACTTGGCTTTGATGACCACCAAGAAAGGTATTAGTGATATGCCTAAGCCTAAGATGATCATCAACCAAATTACTAGTGACATGCCTTATGCTCAAAATATGAACATCATGCCTCACATGCCTGAAATCACCACCGAAACTAATGACGAGATACAATGGAGTGAAATATTAAGTTTTGATTTCAATGAGGAAGATACTGGAATCACAAAATATCATATTCAACAAATTTAG

Coding sequence (CDS)

ATGCATGAGTACAACTTGCATGAGAGTGTGATCACATGTGGTTGTTCAGGTCTAAACTATGTATTGTGTCGAATTAGAAAGAATGAAAGACCCAAAAGAAAAGCATTGGAGATATGCAATATTCAACCTACGAAGAAGAGGGTTGTGGCACCTGAGATTCATGATACGAGGAAGATTAACCAAAGACGACCTACAAGAAAAGCAAACAAAATTCCGCCTCAGCAATTAGCCGAGCAGAGTGCCGTGACACCTAATATGGTATGCCACATGCCTTGTGATCCTAAAATGACCACCAACCAAATTCCTCATGATGTGTCCTACTTGGCTTTGATGACCACCAAGAAAGGTATTAGTGATATGCCTAAGCCTAAGATGATCATCAACCAAATTACTAGTGACATGCCTTATGCTCAAAATATGAACATCATGCCTCACATGCCTGAAATCACCACCGAAACTAATGACGAGATACAATGGAGTGAAATATTAAGTTTTGATTTCAATGAGGAAGATACTGGAATCACAAAATATCATATTCAACAAATTTAG

Protein sequence

MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNIQPTKKRVVAPEIHDTRKINQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISDMPKPKMIINQITSDMPYAQNMNIMPHMPEITTETNDEIQWSEILSFDFNEEDTGITKYHIQQI

Homology

[Close]

BLAST of Bhi03G000173 vs. NCBI nr
Match: XP_038877574.1 (NAC domain-containing protein 96-like [Benincasa hispida])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 158/185 (85.41%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNIQPTKKRVVAPEIHDTRKIN 60
           MHEY+LHESVITCG S   YVLCRIRKNE PKRKAL ICNIQPTKKRV+APEIHDTRKIN
Sbjct: 140 MHEYSLHESVITCGYSDPKYVLCRIRKNEGPKRKALGICNIQPTKKRVLAPEIHDTRKIN 199

Query: 61  QRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISDM 120
           QRRPTRKANKI  +QL EQS VTPNMVCHM CDPKMTTNQIPHDVSYLAL TT+KGI DM
Sbjct: 200 QRRPTRKANKILLEQLGEQSVVTPNMVCHMACDPKMTTNQIPHDVSYLALTTTEKGIGDM 259

Query: 121 PKPKMIINQITSDMPYAQNMNIMPHMPEITT---ETNDEIQWSEILSFDFNEEDTGITKY 180
           P+P+M INQITSDMPYAQNMNIMPHMPEITT   ETNDEIQWSE+LSFDFNEED   TKY
Sbjct: 260 PQPEMTINQITSDMPYAQNMNIMPHMPEITTNTMETNDEIQWSEVLSFDFNEEDIENTKY 319

Query: 181 HIQQI 183
           HIQQI
Sbjct: 320 HIQQI 324

[Close]

BLAST of Bhi03G000173 vs. NCBI nr
Match: XP_004139160.1 (NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical protein Csa_006844 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 2.2e-08
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICN--IQPTKKRVVAPEIHDTRK 60
           MHEY++H+  + C     NYVLCR+RKNER KRK LEI     QP KKR+ AP I D  +
Sbjct: 147 MHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNER 206

Query: 61  INQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKK 116
            ++ +P             +Q A T   + ++   P M T+Q    V  +  MTT +
Sbjct: 207 CDELQP------------IDQRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQ 251

[Close]

BLAST of Bhi03G000173 vs. NCBI nr
Match: XP_008465646.1 (PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-06
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNI-QPTKKRVVAPEIHDTRKI 60
           MHEY LH+S +       NYVLCRIRKNER KRK LEI  + QP KKR+ AP+I   +++
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRK-LEIRELQQPNKKRMTAPKISPNKRL 202

Query: 61  NQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISD 120
             +              A++S +   +    P +P++   +  ++ + +   TT + IS 
Sbjct: 203 KTK--------------AKESCLVDQL---QPIEPRLMIRETIYNSNIIPDKTTCEDISV 255

Query: 121 MPK-PKMIINQ 130
           +   P MI NQ
Sbjct: 263 VDHVPNMIANQ 255

[Close]

BLAST of Bhi03G000173 vs. NCBI nr
Match: TYK12052.1 (NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-06
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNI-QPTKKRVVAPEIHDTRKI 60
           MHEY LH+S +       NYVLCRIRKNER KRK LEI  + QP KKR+ AP+I   +++
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRK-LEIRELQQPNKKRMTAPKISPNKRL 202

Query: 61  NQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISD 120
             +              A++S +   +    P +P++   +  ++ + +   TT + IS 
Sbjct: 203 KTK--------------AKESCLVDQL---QPIEPRLMIRETIYNSNIIPDKTTCEDISV 255

Query: 121 MPK-PKMIINQ 130
           +   P MI NQ
Sbjct: 263 VDHVPNMIANQ 255

[Close]

BLAST of Bhi03G000173 vs. NCBI nr
Match: XP_011652873.2 (NAC transcription factor 56 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 6.1e-06
Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGL--NYVLCRIRKNERPKRKALEICN--IQPTKKRVVAPEIHDT 60
           MHEYNLH + +   C G+  NYVLCRIR+NER +RK LEI     QP KKR+ AP+I  +
Sbjct: 143 MHEYNLHPNYL---CEGVDPNYVLCRIRRNERARRK-LEIQGELKQPNKKRIKAPKI--S 202

Query: 61  RKINQRRPTR-KANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKK 116
           R    +  TR + +++ P  + +Q A+T   + +      M T+Q    V YL  MTT +
Sbjct: 203 RNERPKAKTRERCDELQP--IDDQRAITCETIYNSDIRHDMKTHQDISVVDYLPNMTTNQ 254

[Close]

BLAST of Bhi03G000173 vs. ExPASy TrEMBL
Match: A0A0A0M0I5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICN--IQPTKKRVVAPEIHDTRK 60
           MHEY++H+  + C     NYVLCR+RKNER KRK LEI     QP KKR+ AP I D  +
Sbjct: 173 MHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAPHISDNER 232

Query: 61  INQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKK 116
            ++ +P             +Q A T   + ++   P M T+Q    V  +  MTT +
Sbjct: 233 CDELQP------------IDQRATTCETIYNLDIRPDMNTHQDISVVDRVPNMTTNQ 277

[Close]

BLAST of Bhi03G000173 vs. ExPASy TrEMBL
Match: A0A5A7TC54 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00130 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNI-QPTKKRVVAPEIHDTRKI 60
           MHEY LH+S +       NYVLCRIRKNER KRK LEI  + QP KKR+ AP+I   +++
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRK-LEIRELQQPNKKRMTAPKISPNKRL 202

Query: 61  NQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISD 120
             +              A++S +   +    P +P++   +  ++ + +   TT + IS 
Sbjct: 203 KTK--------------AKESCLVDQL---QPIEPRLMIRETIYNSNIIPDKTTCEDISV 255

Query: 121 MPK-PKMIINQ 130
           +   P MI NQ
Sbjct: 263 VDHVPNMIANQ 255

[Close]

BLAST of Bhi03G000173 vs. ExPASy TrEMBL
Match: A0A5D3CL63 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00650 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNI-QPTKKRVVAPEIHDTRKI 60
           MHEY LH+S +       NYVLCRIRKNER KRK LEI  + QP KKR+ AP+I   +++
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRK-LEIRELQQPNKKRMTAPKISPNKRL 202

Query: 61  NQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISD 120
             +              A++S +   +    P +P++   +  ++ + +   TT + IS 
Sbjct: 203 KTK--------------AKESCLVDQL---QPIEPRLMIRETIYNSNIIPDKTTCEDISV 255

Query: 121 MPK-PKMIINQ 130
           +   P MI NQ
Sbjct: 263 VDHVPNMIANQ 255

[Close]

BLAST of Bhi03G000173 vs. ExPASy TrEMBL
Match: A0A1S3CPA2 (NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGLNYVLCRIRKNERPKRKALEICNI-QPTKKRVVAPEIHDTRKI 60
           MHEY LH+S +       NYVLCRIRKNER KRK LEI  + QP KKR+ AP+I   +++
Sbjct: 143 MHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRK-LEIRELQQPNKKRMTAPKISPNKRL 202

Query: 61  NQRRPTRKANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKKGISD 120
             +              A++S +   +    P +P++   +  ++ + +   TT + IS 
Sbjct: 203 KTK--------------AKESCLVDQL---QPIEPRLMIRETIYNSNIIPDKTTCEDISV 255

Query: 121 MPK-PKMIINQ 130
           +   P MI NQ
Sbjct: 263 VDHVPNMIANQ 255

[Close]

BLAST of Bhi03G000173 vs. ExPASy TrEMBL
Match: A0A0A0LFJ5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-06
Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 1   MHEYNLHESVITCGCSGL--NYVLCRIRKNERPKRKALEICN--IQPTKKRVVAPEIHDT 60
           MHEYNLH + +   C G+  NYVLCRIR+NER +RK LEI     QP KKR+ AP+I  +
Sbjct: 143 MHEYNLHPNYL---CEGVDPNYVLCRIRRNERARRK-LEIQGELKQPNKKRIKAPKI--S 202

Query: 61  RKINQRRPTR-KANKIPPQQLAEQSAVTPNMVCHMPCDPKMTTNQIPHDVSYLALMTTKK 116
           R    +  TR + +++ P  + +Q A+T   + +      M T+Q    V YL  MTT +
Sbjct: 203 RNERPKAKTRERCDELQP--IDDQRAITCETIYNSDIRHDMKTHQDISVVDYLPNMTTNQ 254

The following BLAST results are available for this feature:

BLAST of Bhi03G000173 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000173 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G000173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877574.1	1.8e-82	85.41	NAC domain-containing protein 96-like [Benincasa hispida]	[more]
XP_004139160.1	2.2e-08	37.61	NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical p...	[more]
XP_008465646.1	2.7e-06	35.11	PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NA...	[more]
TYK12052.1	2.7e-06	35.11	NAC domain-containing protein 83-like [Cucumis melo var. makuwa]	[more]
XP_011652873.2	6.1e-06	40.83	NAC transcription factor 56 [Cucumis sativus]	[more]

BLAST of Bhi03G000173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0I5	1.1e-08	37.61	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV...	[more]
A0A5A7TC54	1.3e-06	35.11	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CL63	1.3e-06	35.11	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CPA2	1.3e-06	35.11	NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE...	[more]
A0A0A0LFJ5	3.0e-06	40.83	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000173	Bhi03M000173	mRNA