Bhi03G000112 (gene) Wax gourd (B227) v1

Overview
NameBhi03G000112
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 3089379 .. 3089558 (-)
RNA-Seq ExpressionBhi03G000112
SyntenyBhi03G000112
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCAATCAACACGGCTGGGCAATACCAAGAAATCGCCGAAGATCAAGTTAATGCGGGAAGAACAGTCTGGCTGAAGAAATGTGACCAGAAATTTAGATTGAATACACAAATGAAAGGTCCCATAAACATCAACGAACCGGAAAGGACCGAGAACGAAGCTGTCATGTTAGATTGA

mRNA sequence

ATGAAACCAATCAACACGGCTGGGCAATACCAAGAAATCGCCGAAGATCAAGTTAATGCGGGAAGAACAGTCTGGCTGAAGAAATGTGACCAGAAATTTAGATTGAATACACAAATGAAAGGTCCCATAAACATCAACGAACCGGAAAGGACCGAGAACGAAGCTGTCATGTTAGATTGA

Coding sequence (CDS)

ATGAAACCAATCAACACGGCTGGGCAATACCAAGAAATCGCCGAAGATCAAGTTAATGCGGGAAGAACAGTCTGGCTGAAGAAATGTGACCAGAAATTTAGATTGAATACACAAATGAAAGGTCCCATAAACATCAACGAACCGGAAAGGACCGAGAACGAAGCTGTCATGTTAGATTGA

Protein sequence

MKPINTAGQYQEIAEDQVNAGRTVWLKKCDQKFRLNTQMKGPININEPERTENEAVMLD
Homology
[Close]
BLAST of Bhi03G000112 vs. NCBI nr
Match: KAA0052515.1 (hypothetical protein E6C27_scaffold120G001150 [Cucumis melo var. makuwa] >TYK13310.1 hypothetical protein E5676_scaffold255G009330 [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0 

Query: 1  MKPINTAGQYQEIAEDQVNAGRTVWLKKCDQKFRLNTQMKGPININEPERTENEAVMLD 60
          MKPIN AGQ+QEI EDQVNAG TVWL+KCD KFRLNTQM+GPININEPERTENEA+MLD
Sbjct: 1  MKPINGAGQHQEIDEDQVNAG-TVWLEKCDLKFRLNTQMEGPININEPERTENEAIMLD 58

[Close]
BLAST of Bhi03G000112 vs. NCBI nr
Match: KGN49433.1 (hypothetical protein Csa_004453 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-19
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 1  MKPINTAGQYQEIAEDQVNAGRTVWLKKCDQKFRLNTQMKGPININEPERTENEAVMLD 60
          MKPIN AGQ+Q I EDQVNAG+TVW++KCD KFRLNTQM+GPININE ERTENEA+MLD
Sbjct: 1  MKPINRAGQHQGITEDQVNAGKTVWVEKCDLKFRLNTQMEGPININEAERTENEAIMLD 59

[Close]
BLAST of Bhi03G000112 vs. ExPASy TrEMBL
Match: A0A5D3CPG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009330 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.8e-20
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0 

Query: 1  MKPINTAGQYQEIAEDQVNAGRTVWLKKCDQKFRLNTQMKGPININEPERTENEAVMLD 60
          MKPIN AGQ+QEI EDQVNAG TVWL+KCD KFRLNTQM+GPININEPERTENEA+MLD
Sbjct: 1  MKPINGAGQHQEIDEDQVNAG-TVWLEKCDLKFRLNTQMEGPININEPERTENEAIMLD 58

[Close]
BLAST of Bhi03G000112 vs. ExPASy TrEMBL
Match: A0A0A0KIR4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524700 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.9e-20
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 1  MKPINTAGQYQEIAEDQVNAGRTVWLKKCDQKFRLNTQMKGPININEPERTENEAVMLD 60
          MKPIN AGQ+Q I EDQVNAG+TVW++KCD KFRLNTQM+GPININE ERTENEA+MLD
Sbjct: 1  MKPINRAGQHQGITEDQVNAGKTVWVEKCDLKFRLNTQMEGPININEAERTENEAIMLD 59

The following BLAST results are available for this feature:
BLAST of Bhi03G000112 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G000112 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G000112 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052515.11.2e-1986.44hypothetical protein E6C27_scaffold120G001150 [Cucumis melo var. makuwa] >TYK133... [more]
KGN49433.12.0e-1981.36hypothetical protein Csa_004453 [Cucumis sativus][more]
BLAST of Bhi03G000112 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CPG05.8e-2086.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KIR49.9e-2081.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524700 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000112Bhi03M000112mRNA