Bhi02G001556 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G001556
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	(1->3)-beta-glucan endohydrolase
Location	chr2: 50581972 .. 50582220 (-)
RNA-Seq Expression	Bhi02G001556
Synteny	Bhi02G001556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGAATTTACAGAAGGCGGTGAATGCGGCGAATCTTGGCAGGAAGGTGAAAGTGTCAACGATGCATTCGATGGCGGTGTTGAGTCAGTCGGATCTGCCATCGTCGGGGAGGATTAATCCGACGTTTGAAGAAATGATGAAAGCGGTGATGGAATTTTTGAAAGAGAATGAATCGCCAGAGAACGGGAGGAGGAAGATGAAGATGCAGAGGGAAGGTGAAATGAGAAGAAACGATGTGAGATGA

mRNA sequence

ATGGATCAGAATTTACAGAAGGCGGTGAATGCGGCGAATCTTGGCAGGAAGGTGAAAGTGTCAACGATGCATTCGATGGCGGTGTTGAGTCAGTCGGATCTGCCATCGTCGGGGAGGATTAATCCGACGTTTGAAGAAATGATGAAAGCGGTGATGGAATTTTTGAAAGAGAATGAATCGCCAGAGAACGGGAGGAGGAAGATGAAGATGCAGAGGGAAGGTGAAATGAGAAGAAACGATGTGAGATGA

Coding sequence (CDS)

ATGGATCAGAATTTACAGAAGGCGGTGAATGCGGCGAATCTTGGCAGGAAGGTGAAAGTGTCAACGATGCATTCGATGGCGGTGTTGAGTCAGTCGGATCTGCCATCGTCGGGGAGGATTAATCCGACGTTTGAAGAAATGATGAAAGCGGTGATGGAATTTTTGAAAGAGAATGAATCGCCAGAGAACGGGAGGAGGAAGATGAAGATGCAGAGGGAAGGTGAAATGAGAAGAAACGATGTGAGATGA

Protein sequence

MDQNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESPENGRRKMKMQREGEMRRNDVR

Homology

[Close]

BLAST of Bhi02G001556 vs. TAIR 10
Match: AT2G16230.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 60.1 bits (144), Expect = 9.8e-10
Identity = 27/59 (45.76%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+QKA+ A +LG K+KVST+H+M VL  S+ PS+G   P+++  +K +++FL +  SP
Sbjct: 136 QNVQKALEAVSLGGKIKVSTVHAMTVLGNSEPPSAGSFAPSYQAGLKGILQFLSDTGSP 194

[Close]

BLAST of Bhi02G001556 vs. TAIR 10
Match: AT4G34480.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 57.0 bits (136), Expect = 8.3e-09
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+QKA+ A +LG K+KVST++SM VL  SD PSSG     ++  +K +++FL +  SP
Sbjct: 137 QNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSP 195

[Close]

BLAST of Bhi02G001556 vs. TAIR 10
Match: AT4G29360.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.7e-07
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+  A+  + L +K+K+S+ HS+A+LS+S  PSS   +      +K ++EFL ENESP
Sbjct: 137 RNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESP 195

[Close]

BLAST of Bhi02G001556 vs. TAIR 10
Match: AT4G29360.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.7e-07
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+  A+  + L +K+K+S+ HS+A+LS+S  PSS   +      +K ++EFL ENESP
Sbjct: 137 RNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESP 195

[Close]

BLAST of Bhi02G001556 vs. TAIR 10
Match: AT5G56590.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+  A+    L R++KVST  S+ +LS+S  PS+G  N ++   ++ ++EFL EN+SP
Sbjct: 137 QNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSP 195

[Close]

BLAST of Bhi02G001556 vs. ExPASy Swiss-Prot
Match: Q94G86 (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea OX=4146 GN=OLE9 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-11
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+Q A+NAA+LG KVKVST+H+MAVLSQS  PSSG  NP   + MKA+++F   N++P
Sbjct: 141 QNVQNALNAASLGGKVKVSTVHAMAVLSQSYPPSSGVFNPGLGDTMKALLQFQSANDAP 199

[Close]

BLAST of Bhi02G001556 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-07
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+QKA+ A +LG K+KVST++SM VL  SD PSSG     ++  +K +++FL +  SP
Sbjct: 137 QNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSP 195

[Close]

BLAST of Bhi02G001556 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-05
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+  A+  + L +K+K+S+ HS+A+LS+S  PSS   +      +K ++EFL ENESP
Sbjct: 137 RNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESP 195

[Close]

BLAST of Bhi02G001556 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.4e-05
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+  A+    L R++KVST  S+ +LS+S  PS+G  N ++   ++ ++EFL EN+SP
Sbjct: 137 QNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSP 195

[Close]

BLAST of Bhi02G001556 vs. NCBI nr
Match: TYK13675.1 (glucan endo-1,3-beta-D-glucosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-15
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAA+LG KVKVST+HSMAVLSQSD PSSGRINP FE  MKAV+EFLKENESP
Sbjct: 173 RNVQNAVNAASLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFETTMKAVVEFLKENESP 231

[Close]

BLAST of Bhi02G001556 vs. NCBI nr
Match: XP_008457927.1 (PREDICTED: glucan endo-1,3-beta-D-glucosidase-like [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-15
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAA+LG KVKVST+HSMAVLSQSD PSSGRINP FE  MKAV+EFLKENESP
Sbjct: 142 RNVQNAVNAASLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFETTMKAVVEFLKENESP 200

[Close]

BLAST of Bhi02G001556 vs. NCBI nr
Match: KAA0045914.1 (glucan endo-1,3-beta-D-glucosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-15
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAA+LG KVKVST+HSMAVLSQSD PSSGRINP FE  MKAV+EFLKENESP
Sbjct: 173 RNVQNAVNAASLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFETTMKAVVEFLKENESP 231

[Close]

BLAST of Bhi02G001556 vs. NCBI nr
Match: XP_004148850.1 (glucan endo-1,3-beta-D-glucosidase [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAANLG KVKVST+HSMAVLSQSD PSSGRINP FE  MK V+EFLKENESP
Sbjct: 142 RNVQNAVNAANLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFEGTMKEVVEFLKENESP 200

[Close]

BLAST of Bhi02G001556 vs. NCBI nr
Match: XP_038900992.1 (glucan endo-1,3-beta-D-glucosidase-like [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-14
Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+Q A+N+ANLG KVKVST+HSMAVLSQSD PSSGR NP FE+ MKAV+EFLKE +SP
Sbjct: 137 QNVQNALNSANLGGKVKVSTVHSMAVLSQSDPPSSGRFNPVFEQTMKAVVEFLKEKKSP 195

[Close]

BLAST of Bhi02G001556 vs. ExPASy TrEMBL
Match: A0A5D3CQ55 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001950 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAA+LG KVKVST+HSMAVLSQSD PSSGRINP FE  MKAV+EFLKENESP
Sbjct: 173 RNVQNAVNAASLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFETTMKAVVEFLKENESP 231

[Close]

BLAST of Bhi02G001556 vs. ExPASy TrEMBL
Match: A0A5A7TS81 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004520 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAA+LG KVKVST+HSMAVLSQSD PSSGRINP FE  MKAV+EFLKENESP
Sbjct: 173 RNVQNAVNAASLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFETTMKAVVEFLKENESP 231

[Close]

BLAST of Bhi02G001556 vs. ExPASy TrEMBL
Match: A0A1S3C673 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo OX=3656 GN=LOC103497492 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAA+LG KVKVST+HSMAVLSQSD PSSGRINP FE  MKAV+EFLKENESP
Sbjct: 142 RNVQNAVNAASLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFETTMKAVVEFLKENESP 200

[Close]

BLAST of Bhi02G001556 vs. ExPASy TrEMBL
Match: A0A0A0LL52 ((1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G246520 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           +N+Q AVNAANLG KVKVST+HSMAVLSQSD PSSGRINP FE  MK V+EFLKENESP
Sbjct: 142 RNVQNAVNAANLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFEGTMKEVVEFLKENESP 200

[Close]

BLAST of Bhi02G001556 vs. ExPASy TrEMBL
Match: A0A6J1J7S0 ((1->3)-beta-glucan endohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111484236 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-14
Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 3   QNLQKAVNAANLGRKVKVSTMHSMAVLSQSDLPSSGRINPTFEEMMKAVMEFLKENESP 62
           QN+Q A+N+ANLG KVKVST+HSMAVLSQSD PSSGR NP  E+MMKAV+EF KEN SP
Sbjct: 139 QNVQNALNSANLGGKVKVSTVHSMAVLSQSDPPSSGRFNPVLEQMMKAVVEFEKENASP 197

The following BLAST results are available for this feature:

BLAST of Bhi02G001556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16230.1	9.8e-10	45.76	O-Glycosyl hydrolases family 17 protein	[more]
AT4G34480.1	8.3e-09	47.46	O-Glycosyl hydrolases family 17 protein	[more]
AT4G29360.2	7.7e-07	40.68	O-Glycosyl hydrolases family 17 protein	[more]
AT4G29360.1	7.7e-07	40.68	O-Glycosyl hydrolases family 17 protein	[more]
AT5G56590.1	1.7e-06	40.68	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of Bhi02G001556 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G86	5.0e-11	59.32	Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea OX=4146 GN=OLE9 PE=1 SV=1	[more]
Q9M069	1.2e-07	47.46	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ...	[more]
Q8VYE5	1.1e-05	40.68	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
Q9FJU9	2.4e-05	40.68	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]

BLAST of Bhi02G001556 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13675.1	2.5e-15	81.36	glucan endo-1,3-beta-D-glucosidase-like [Cucumis melo var. makuwa]	[more]
XP_008457927.1	2.5e-15	81.36	PREDICTED: glucan endo-1,3-beta-D-glucosidase-like [Cucumis melo]	[more]
KAA0045914.1	2.5e-15	81.36	glucan endo-1,3-beta-D-glucosidase-like [Cucumis melo var. makuwa]	[more]
XP_004148850.1	3.3e-15	81.36	glucan endo-1,3-beta-D-glucosidase [Cucumis sativus]	[more]
XP_038900992.1	1.6e-14	76.27	glucan endo-1,3-beta-D-glucosidase-like [Benincasa hispida]	[more]

BLAST of Bhi02G001556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQ55	1.2e-15	81.36	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7TS81	1.2e-15	81.36	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3C673	1.2e-15	81.36	(1->3)-beta-glucan endohydrolase OS=Cucumis melo OX=3656 GN=LOC103497492 PE=3 SV...	[more]
A0A0A0LL52	1.6e-15	81.36	(1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G246520 PE=3...	[more]
A0A6J1J7S0	1.7e-14	76.27	(1->3)-beta-glucan endohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111484236 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..62 e-value: 3.5E-14 score: 54.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..82
None	No IPR available	PANTHER	PTHR32227:SF16	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN	coord: 3..61
IPR044965	Glycoside hydrolase family 17, plant	PANTHER	PTHR32227	GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED	coord: 3..61
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 3..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001556	Bhi02M001556	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds