Bhi02G000048 (gene) Wax gourd (B227) v1

Overview
NameBhi02G000048
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCACTA en-spm transposon protein
Locationchr2: 1346777 .. 1347324 (+)
RNA-Seq ExpressionBhi02G000048
SyntenyBhi02G000048
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGGCAACATCAAGATCATCTAGCAGATGAACTAGTTAGGGAAGCTAATACTTTGACTACGAGTCTCTCGATAGAGGTAGGAACGACCATCGCATCAGGTGATAGTATGTCTTAGGTTAAATATCTAAATATTATTGTAACCTCTAATTGAAGTAGTGTATTTGATCTTGTTACAGGATCCAATTCTAAAACAAAACGGAAGCATGGGCGAGGGCACAACCGAAACATTAATTTAGATGTATATGTACATCGACATGGGTGGATCCCAATTACCATTTCTGAAGGTGTTGGAAAACCAGTAAGCGTCTTTGCTACAAAGTTTAGCAACGCCATTGGGACCTTGACCTGGGACATATTTCATTACGTTGTTCTAAGTGGAAGGATGTACCTAGTGATGTCACTGCCACTATAAAGGCTCATTTACAGGTAAGTTTTATGCTTTTATTGTATTAATCTCATATGTGTACTTATCATAACTTTTATTAAAAATGTAAACACATTTTATTGTAGATCTATCCTCGAATGTCGTCAATAAGTACATAA

mRNA sequence

ATGGTGGGGCAACATCAAGATCATCTAGCAGATGAACTAGTTAGGGAAGCTAATACTTTGACTACGAGTCTCTCGATAGAGGTAGGAACGACCATCGCATCAGGATCCAATTCTAAAACAAAACGGAAGCATGGGCGAGGGCACAACCGAAACATTAATTTAGATGTATATGTACATCGACATGGGTGGATCCCAATTACCATTTCTGAAGGTGTTGGAAAACCACAACGCCATTGGGACCTTGACCTGGGACATATTTCATTACGTTGTTCTAAGTGGAAGGATGTACCTAGTGATGTCACTGCCACTATAAAGGCTCATTTACAGATCTATCCTCGAATGTCGTCAATAAGTACATAA

Coding sequence (CDS)

ATGGTGGGGCAACATCAAGATCATCTAGCAGATGAACTAGTTAGGGAAGCTAATACTTTGACTACGAGTCTCTCGATAGAGGTAGGAACGACCATCGCATCAGGATCCAATTCTAAAACAAAACGGAAGCATGGGCGAGGGCACAACCGAAACATTAATTTAGATGTATATGTACATCGACATGGGTGGATCCCAATTACCATTTCTGAAGGTGTTGGAAAACCACAACGCCATTGGGACCTTGACCTGGGACATATTTCATTACGTTGTTCTAAGTGGAAGGATGTACCTAGTGATGTCACTGCCACTATAAAGGCTCATTTACAGATCTATCCTCGAATGTCGTCAATAAGTACATAA

Protein sequence

MVGQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRHGWIPITISEGVGKPQRHWDLDLGHISLRCSKWKDVPSDVTATIKAHLQIYPRMSSIST
Homology
BLAST of Bhi02G000048 vs. NCBI nr
Match: TYK00374.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16
Identity = 61/120 (50.83%), Postives = 72/120 (60.00%), Query Frame = 0

Query: 1   MVGQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHR 60
           M+GQ QD LADELVR+ANTLT   S +        S+SKTK+K    H+RNIN+D+YV R
Sbjct: 1   MMGQRQDCLADELVRKANTLTMDPSTK------GDSSSKTKKKCWHWHSRNINVDMYVQR 60

Query: 61  HGWIPITISEGVGKPQRHWDLDLGH---------ISLRCSKWKDVPSDVTATIKAHLQIY 112
           H  I ITI E VGK    +     +         IS+ CSKWKDV SDV  TIKA LQ Y
Sbjct: 61  HEKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPY 114

BLAST of Bhi02G000048 vs. NCBI nr
Match: KAA0025491.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-16
Identity = 60/119 (50.42%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 2   VGQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRH 61
           +GQ QD LADELVR+ANTLT   S +        S+SKTK+K    H+RNIN+D+YV RH
Sbjct: 1   MGQRQDCLADELVRKANTLTMDPSTK------GDSSSKTKKKCWHWHSRNINVDMYVQRH 60

Query: 62  GWIPITISEGVGKPQRHWDLDLGH---------ISLRCSKWKDVPSDVTATIKAHLQIY 112
             I ITI E VGK    +     +         IS+ CSKWKDV SDV  TIKA LQ Y
Sbjct: 61  EKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPY 113

BLAST of Bhi02G000048 vs. NCBI nr
Match: KAA0038360.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-15
Identity = 59/118 (50.00%), Postives = 70/118 (59.32%), Query Frame = 0

Query: 3   GQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRHG 62
           G+ +D LADELVREAN L       +G TI   S S TKRK G  H+RNI+LD+YV RHG
Sbjct: 64  GRMEDRLADELVREANLLA------MGFTIEGDSCSGTKRKCGHEHSRNISLDMYVQRHG 123

Query: 63  WIPITISEGVGKPQRHWDLDLGH---------ISLRCSKWKDVPSDVTATIKAHLQIY 112
            IPIT  E VGKP   +     +         I + CSKWKD  SDV +TIKAH Q +
Sbjct: 124 RIPITNDEMVGKPISVFATKFCNAIGTATQDTILVCCSKWKDGFSDVISTIKAHQQTH 175

BLAST of Bhi02G000048 vs. NCBI nr
Match: TYK14986.1 (uncharacterized protein E5676_scaffold45G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-08
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0

Query: 11  DELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRHGWIPITISE 70
           DELV+EANTLT      +G +I   S+S TK+K  RGH+RNI+LD+YV RH  I ITI E
Sbjct: 157 DELVQEANTLT------MGPSIEGDSSSGTKKKRERGHSRNISLDMYVQRHEKIQITIDE 215

Query: 71  GVGKP 76
            VGKP
Sbjct: 217 KVGKP 215

BLAST of Bhi02G000048 vs. ExPASy TrEMBL
Match: A0A5D3BM75 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00400 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.4e-17
Identity = 61/120 (50.83%), Postives = 72/120 (60.00%), Query Frame = 0

Query: 1   MVGQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHR 60
           M+GQ QD LADELVR+ANTLT   S +        S+SKTK+K    H+RNIN+D+YV R
Sbjct: 1   MMGQRQDCLADELVRKANTLTMDPSTK------GDSSSKTKKKCWHWHSRNINVDMYVQR 60

Query: 61  HGWIPITISEGVGKPQRHWDLDLGH---------ISLRCSKWKDVPSDVTATIKAHLQIY 112
           H  I ITI E VGK    +     +         IS+ CSKWKDV SDV  TIKA LQ Y
Sbjct: 61  HEKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPY 114

BLAST of Bhi02G000048 vs. ExPASy TrEMBL
Match: A0A5A7SMM8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00980 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-16
Identity = 60/119 (50.42%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 2   VGQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRH 61
           +GQ QD LADELVR+ANTLT   S +        S+SKTK+K    H+RNIN+D+YV RH
Sbjct: 1   MGQRQDCLADELVRKANTLTMDPSTK------GDSSSKTKKKCWHWHSRNINVDMYVQRH 60

Query: 62  GWIPITISEGVGKPQRHWDLDLGH---------ISLRCSKWKDVPSDVTATIKAHLQIY 112
             I ITI E VGK    +     +         IS+ CSKWKDV SDV  TIKA LQ Y
Sbjct: 61  EKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPY 113

BLAST of Bhi02G000048 vs. ExPASy TrEMBL
Match: A0A5A7T4S0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002410 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.0e-16
Identity = 59/118 (50.00%), Postives = 70/118 (59.32%), Query Frame = 0

Query: 3   GQHQDHLADELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRHG 62
           G+ +D LADELVREAN L       +G TI   S S TKRK G  H+RNI+LD+YV RHG
Sbjct: 64  GRMEDRLADELVREANLLA------MGFTIEGDSCSGTKRKCGHEHSRNISLDMYVQRHG 123

Query: 63  WIPITISEGVGKPQRHWDLDLGH---------ISLRCSKWKDVPSDVTATIKAHLQIY 112
            IPIT  E VGKP   +     +         I + CSKWKD  SDV +TIKAH Q +
Sbjct: 124 RIPITNDEMVGKPISVFATKFCNAIGTATQDTILVCCSKWKDGFSDVISTIKAHQQTH 175

BLAST of Bhi02G000048 vs. ExPASy TrEMBL
Match: A0A5D3CX15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00170 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0

Query: 11  DELVREANTLTTSLSIEVGTTIASGSNSKTKRKHGRGHNRNINLDVYVHRHGWIPITISE 70
           DELV+EANTLT      +G +I   S+S TK+K  RGH+RNI+LD+YV RH  I ITI E
Sbjct: 157 DELVQEANTLT------MGPSIEGDSSSGTKKKRERGHSRNISLDMYVQRHEKIQITIDE 215

Query: 71  GVGKP 76
            VGKP
Sbjct: 217 KVGKP 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK00374.11.1e-1650.83CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0025491.14.3e-1650.42CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0038360.11.2e-1550.00CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK14986.14.3e-0858.46uncharacterized protein E5676_scaffold45G00170 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3BM755.4e-1750.83CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7SMM82.1e-1650.42CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7T4S06.0e-1650.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CX152.1e-0858.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000048Bhi02M000048mRNA