Bhi01G002530 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G002530
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr1: 81795881 .. 81796062 (+)
RNA-Seq Expression	Bhi01G002530
Synteny	Bhi01G002530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCTGAGTGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

mRNA sequence

ATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCTGAGTGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

Coding sequence (CDS)

ATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCTGAGTGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

Protein sequence

TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA

Homology

[Close]

BLAST of Bhi01G002530 vs. NCBI nr
Match: KAE8652002.1 (hypothetical protein Csa_021689 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 1   TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
           TVLVSTINDADQGLADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 54  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 112

[Close]

BLAST of Bhi01G002530 vs. NCBI nr
Match: KAE8652003.1 (hypothetical protein Csa_021696, partial [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 1  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
          TVLVSTINDADQGLADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 5  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 63

[Close]

BLAST of Bhi01G002530 vs. NCBI nr
Match: KAG6484325.1 (hypothetical protein ZIOFF_061128 [Zingiber officinale])

HSP 1 Score: 109.8 bits (273), Expect = 8.3e-21
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1   TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
           TVLVSTINDADQG ADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 346 TVLVSTINDADQGSADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 404

[Close]

BLAST of Bhi01G002530 vs. NCBI nr
Match: MRN07819.1 (hypothetical protein [Lactobacillus sp. 0.1XD8-4])

HSP 1 Score: 109.8 bits (273), Expect = 8.3e-21
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
          TVLVSTINDADQG ADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 9  TVLVSTINDADQGSADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 67

[Close]

BLAST of Bhi01G002530 vs. NCBI nr
Match: THU64758.1 (hypothetical protein C4D60_Mb01t29820 [Musa balbisiana] >THU64761.1 hypothetical protein C4D60_Mb01t29850 [Musa balbisiana])

HSP 1 Score: 109.8 bits (273), Expect = 8.3e-21
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
          TVLVSTINDADQG ADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 37 TVLVSTINDADQGSADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 95

[Close]

BLAST of Bhi01G002530 vs. ExPASy TrEMBL
Match: A0A0A0LDF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G512980 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.1e-22
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 1   TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
           TVLVSTINDADQGLADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 54  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 112

[Close]

BLAST of Bhi01G002530 vs. ExPASy TrEMBL
Match: A0A4S8JRQ3 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t29820 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
          TVLVSTINDADQG ADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 37 TVLVSTINDADQGSADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 95

[Close]

BLAST of Bhi01G002530 vs. ExPASy TrEMBL
Match: A0A6A1VJU8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G025804 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1   TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
           TVLVSTINDADQG ADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 51  TVLVSTINDADQGSADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 109

[Close]

BLAST of Bhi01G002530 vs. ExPASy TrEMBL
Match: A0A4S8JRP8 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t29760 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1   TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
           TVLVSTINDADQG ADVALRTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 138 TVLVSTINDADQGSADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 196

[Close]

BLAST of Bhi01G002530 vs. ExPASy TrEMBL
Match: A0A2N9I7Q4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48564 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.0e-21
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 1   TVLVSTINDADQGLADVALRTPPAPYEKSKSLGSEWSMVARLKLKGIDGRAPPGVEPAA 60
           TVLVSTINDADQGLADV  RTPPAPYEKSKSLGS  SMVARLKLKGIDGRAPPGVEPAA
Sbjct: 235 TVLVSTINDADQGLADVTYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 293

The following BLAST results are available for this feature:

BLAST of Bhi01G002530 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002530 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G002530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652002.1	1.7e-21	96.61	hypothetical protein Csa_021689 [Cucumis sativus]	[more]
KAE8652003.1	1.7e-21	96.61	hypothetical protein Csa_021696, partial [Cucumis sativus]	[more]
KAG6484325.1	8.3e-21	94.92	hypothetical protein ZIOFF_061128 [Zingiber officinale]	[more]
MRN07819.1	8.3e-21	94.92	hypothetical protein [Lactobacillus sp. 0.1XD8-4]	[more]
THU64758.1	8.3e-21	94.92	hypothetical protein C4D60_Mb01t29820 [Musa balbisiana] >THU64761.1 hypothetical...	[more]

BLAST of Bhi01G002530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDF7	8.1e-22	96.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G512980 PE=4 SV=1	[more]
A0A4S8JRQ3	4.0e-21	94.92	Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t29820 PE=4 SV=...	[more]
A0A6A1VJU8	4.0e-21	94.92	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G025804 PE=4 SV=1	[more]
A0A4S8JRP8	4.0e-21	94.92	Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t29760 PE=4 SV=...	[more]
A0A2N9I7Q4	9.0e-21	93.22	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48564 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34410	INTRON-ENCODED HOMING ENDONUCLEASE, PUTATIVE-RELATED	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M002530	Bhi01M002530	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity