Bhi01G002206 (gene) Wax gourd (B227) v1

Overview
NameBhi01G002206
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUbiquitin-conjugating enzyme E2 34
Locationchr1: 70055195 .. 70055714 (-)
RNA-Seq ExpressionBhi01G002206
SyntenyBhi01G002206
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATCCTGGTTTTGATGACATTGATCTTAGCCTCAACTTTTCCAAGGTGAGTCAGTAATGTAGTTTCATCTGATATTCTTCATGTCTTAGTGAAATGTGTTTGTAAATTTCAGTTCTTGAAAGAAGCAAAACGTCATGCAATAGAACAAGATTTCAAGGCCTCTACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAGAAGAGCAAGAAATCATGGAAAAACACCCTCTTCTCATGGTTGAAAAGTGAAAAAAAGACTAAGCCAATGCCTAAACCAGAGAAAAATCCTCACACACCTAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACCGGAGCTACAACCACCGACAGCAGACCCCGACGCCATCCGATGTCTGGACCGATCGCTAGTCTCTTCAATCCTAGTATGAGAACAGATATGGAGATCCCATATATGTATCTCCACCAGCTCAATACCCCCAATTCTAATCACATTTATGGTCCAATTTATCTTGTTACATAG

mRNA sequence

ATGGACGATCCTGGTTTTGATGACATTGATCTTAGCCTCAACTTTTCCAAGTTCTTGAAAGAAGCAAAACGTCATGCAATAGAACAAGATTTCAAGGCCTCTACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAGAAGAGCAAGAAATCATGGAAAAACACCCTCTTCTCATGGTTGAAAAGTGAAAAAAAGACTAAGCCAATGCCTAAACCAGAGAAAAATCCTCACACACCTAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACCGGAGCTACAACCACCGACAGCAGACCCCGACGCCATCCGATGTCTGGACCGATCGCTAGTCTCTTCAATCCTAGTATGAGAACAGATATGGAGATCCCATATATGTATCTCCACCAGCTCAATACCCCCAATTCTAATCACATTTATGGTCCAATTTATCTTGTTACATAG

Coding sequence (CDS)

ATGGACGATCCTGGTTTTGATGACATTGATCTTAGCCTCAACTTTTCCAAGTTCTTGAAAGAAGCAAAACGTCATGCAATAGAACAAGATTTCAAGGCCTCTACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAGAAGAGCAAGAAATCATGGAAAAACACCCTCTTCTCATGGTTGAAAAGTGAAAAAAAGACTAAGCCAATGCCTAAACCAGAGAAAAATCCTCACACACCTAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACCGGAGCTACAACCACCGACAGCAGACCCCGACGCCATCCGATGTCTGGACCGATCGCTAGTCTCTTCAATCCTAGTATGAGAACAGATATGGAGATCCCATATATGTATCTCCACCAGCTCAATACCCCCAATTCTAATCACATTTATGGTCCAATTTATCTTGTTACATAG

Protein sequence

MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSMRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT
Homology
BLAST of Bhi01G002206 vs. NCBI nr
Match: XP_038895377.1 (uncharacterized protein LOC120083617 [Benincasa hispida])

HSP 1 Score: 305.1 bits (780), Expect = 3.4e-79
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFS 60
           MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFS
Sbjct: 43  MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFS 102

Query: 61  WLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSM 120
           WLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSM
Sbjct: 103 WLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSM 162

Query: 121 RTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           RTDMEIPYMYLHQLNTPNSNHIYGPIYLVT
Sbjct: 163 RTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 192

BLAST of Bhi01G002206 vs. NCBI nr
Match: XP_011651731.1 (uncharacterized protein LOC101209455 [Cucumis sativus] >KGN58479.1 hypothetical protein Csa_002575 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 4.3e-58
Identity = 117/151 (77.48%), Postives = 132/151 (87.42%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLF 60
           M++PGFDD D+ LNFSKFL+EAK HA +Q FK AS EEET RKWLAQEKK+KKSWKNTLF
Sbjct: 11  MENPGFDDFDIGLNFSKFLEEAKHHATQQHFKAASIEEETERKWLAQEKKNKKSWKNTLF 70

Query: 61  SWLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPS 120
           SWLKS+KK+K +PKPEKNPHTPNKRRV+VSGPIY+ A T D RPRR PMSGPIASLFNP+
Sbjct: 71  SWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPIYSEAMTIDGRPRRRPMSGPIASLFNPT 130

Query: 121 MRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           MRT+ EIPYM LHQL+ PN+N  YGPIYLVT
Sbjct: 131 MRTETEIPYMCLHQLSAPNTNQNYGPIYLVT 161

BLAST of Bhi01G002206 vs. NCBI nr
Match: KAG6606678.1 (hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036398.1 hypothetical protein SDJN02_00015 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.8 bits (595), Expect = 9.7e-58
Identity = 117/150 (78.00%), Postives = 126/150 (84.00%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFS 60
           MDDP FDD D   NFSKFL+EAK HA E+DFKAST+EETGRKWLAQ KKSKKSWKNTLFS
Sbjct: 1   MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFS 60

Query: 61  WLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSM 120
           WL S+K +K +PK E+N HT NKRRVHVSGPIYTGATT D RPR  P SGPIASLFNPSM
Sbjct: 61  WLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVDGRPRHRPTSGPIASLFNPSM 120

Query: 121 RTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           RT+MEIPYM LHQL +P  NH YGPIYLVT
Sbjct: 121 RTEMEIPYMCLHQLTSPIPNHYYGPIYLVT 150

BLAST of Bhi01G002206 vs. NCBI nr
Match: XP_022152626.1 (uncharacterized protein LOC111020302 [Momordica charantia])

HSP 1 Score: 233.8 bits (595), Expect = 9.7e-58
Identity = 120/153 (78.43%), Postives = 131/153 (85.62%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKA--STEEETGRKWLAQEKKSKKSWKNTL 60
           MDDPGFD+ D  L+FSKFL+EAK HA  QDFKA  STEEE GRKWL QEKKSKKSWK T+
Sbjct: 11  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTI 70

Query: 61  FSWLKSEKKTKPMPKPEKN-PHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFN 120
           FSWLKS+KK+KP+PKPE N PHT +KR VHVSGPIYTGA TTD RPRR P SGPIASLFN
Sbjct: 71  FSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAMTTDGRPRRRPTSGPIASLFN 130

Query: 121 PSMRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           PSMRT+MEIPYM LHQL +PNS+H YGPIYLVT
Sbjct: 131 PSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT 163

BLAST of Bhi01G002206 vs. NCBI nr
Match: XP_022949073.1 (uncharacterized protein LOC111452535 [Cucurbita moschata])

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 116/150 (77.33%), Postives = 125/150 (83.33%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFS 60
           MDDP FDD D   NFSKFL+EAK HA E+DFKAST+EETGRKWLAQ KKSKKSWKNTLFS
Sbjct: 1   MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFS 60

Query: 61  WLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSM 120
           WL S+K +K +PK E+N HT NKRRVHVSG IYTGATT D RPR  P SGPIASLFNPSM
Sbjct: 61  WLNSDKTSKSLPKLERNSHTSNKRRVHVSGLIYTGATTVDGRPRHRPTSGPIASLFNPSM 120

Query: 121 RTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           RT+MEIPYM LHQL +P  NH YGPIYLVT
Sbjct: 121 RTEMEIPYMCLHQLTSPIPNHYYGPIYLVT 150

BLAST of Bhi01G002206 vs. ExPASy TrEMBL
Match: A0A0A0LC20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646660 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.1e-58
Identity = 117/151 (77.48%), Postives = 132/151 (87.42%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLF 60
           M++PGFDD D+ LNFSKFL+EAK HA +Q FK AS EEET RKWLAQEKK+KKSWKNTLF
Sbjct: 11  MENPGFDDFDIGLNFSKFLEEAKHHATQQHFKAASIEEETERKWLAQEKKNKKSWKNTLF 70

Query: 61  SWLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPS 120
           SWLKS+KK+K +PKPEKNPHTPNKRRV+VSGPIY+ A T D RPRR PMSGPIASLFNP+
Sbjct: 71  SWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPIYSEAMTIDGRPRRRPMSGPIASLFNPT 130

Query: 121 MRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           MRT+ EIPYM LHQL+ PN+N  YGPIYLVT
Sbjct: 131 MRTETEIPYMCLHQLSAPNTNQNYGPIYLVT 161

BLAST of Bhi01G002206 vs. ExPASy TrEMBL
Match: A0A6J1DIA9 (uncharacterized protein LOC111020302 OS=Momordica charantia OX=3673 GN=LOC111020302 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.7e-58
Identity = 120/153 (78.43%), Postives = 131/153 (85.62%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKA--STEEETGRKWLAQEKKSKKSWKNTL 60
           MDDPGFD+ D  L+FSKFL+EAK HA  QDFKA  STEEE GRKWL QEKKSKKSWK T+
Sbjct: 11  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTI 70

Query: 61  FSWLKSEKKTKPMPKPEKN-PHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFN 120
           FSWLKS+KK+KP+PKPE N PHT +KR VHVSGPIYTGA TTD RPRR P SGPIASLFN
Sbjct: 71  FSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAMTTDGRPRRRPTSGPIASLFN 130

Query: 121 PSMRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           PSMRT+MEIPYM LHQL +PNS+H YGPIYLVT
Sbjct: 131 PSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT 163

BLAST of Bhi01G002206 vs. ExPASy TrEMBL
Match: A0A6J1GB15 (uncharacterized protein LOC111452535 OS=Cucurbita moschata OX=3662 GN=LOC111452535 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.8e-57
Identity = 116/150 (77.33%), Postives = 125/150 (83.33%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFS 60
           MDDP FDD D   NFSKFL+EAK HA E+DFKAST+EETGRKWLAQ KKSKKSWKNTLFS
Sbjct: 1   MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFS 60

Query: 61  WLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPSM 120
           WL S+K +K +PK E+N HT NKRRVHVSG IYTGATT D RPR  P SGPIASLFNPSM
Sbjct: 61  WLNSDKTSKSLPKLERNSHTSNKRRVHVSGLIYTGATTVDGRPRHRPTSGPIASLFNPSM 120

Query: 121 RTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           RT+MEIPYM LHQL +P  NH YGPIYLVT
Sbjct: 121 RTEMEIPYMCLHQLTSPIPNHYYGPIYLVT 150

BLAST of Bhi01G002206 vs. ExPASy TrEMBL
Match: A0A5D3D6L0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001220 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.6e-56
Identity = 116/151 (76.82%), Postives = 130/151 (86.09%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLF 60
           M++ GFDD D+ LNFS FL+EAK HA  Q  K AS EEETGRK LAQEKK+KKSWKNTLF
Sbjct: 11  MENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEETGRKRLAQEKKNKKSWKNTLF 70

Query: 61  SWLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPS 120
           SWLKS+KK+K +PKPEKNPHTPNKRRV+VSGP+Y+ ATTT+ RPRR PMSGPIASLFNPS
Sbjct: 71  SWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMSGPIASLFNPS 130

Query: 121 MRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           MRT+ EIPYM L QL+ PNSNH YGPIYLVT
Sbjct: 131 MRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161

BLAST of Bhi01G002206 vs. ExPASy TrEMBL
Match: A0A1S3CDK1 (uncharacterized protein LOC103499209 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499209 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55
Identity = 115/151 (76.16%), Postives = 129/151 (85.43%), Query Frame = 0

Query: 1   MDDPGFDDIDLSLNFSKFLKEAKRHAIEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLF 60
           M++ GFDD D+ LNFS FL+EAK HA  Q  K AS EEE GRK LAQEKK+KKSWKNTLF
Sbjct: 11  MENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEERGRKRLAQEKKNKKSWKNTLF 70

Query: 61  SWLKSEKKTKPMPKPEKNPHTPNKRRVHVSGPIYTGATTTDSRPRRHPMSGPIASLFNPS 120
           SWLKS+KK+K +PKPEKNPHTPNKRRV+VSGP+Y+ ATTT+ RPRR PMSGPIASLFNPS
Sbjct: 71  SWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPRRRPMSGPIASLFNPS 130

Query: 121 MRTDMEIPYMYLHQLNTPNSNHIYGPIYLVT 151
           MRT+ EIPYM L QL+ PNSNH YGPIYLVT
Sbjct: 131 MRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038895377.13.4e-79100.00uncharacterized protein LOC120083617 [Benincasa hispida][more]
XP_011651731.14.3e-5877.48uncharacterized protein LOC101209455 [Cucumis sativus] >KGN58479.1 hypothetical ... [more]
KAG6606678.19.7e-5878.00hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022152626.19.7e-5878.43uncharacterized protein LOC111020302 [Momordica charantia][more]
XP_022949073.11.4e-5677.33uncharacterized protein LOC111452535 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A0A0LC202.1e-5877.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646660 PE=4 SV=1[more]
A0A6J1DIA94.7e-5878.43uncharacterized protein LOC111020302 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1GB156.8e-5777.33uncharacterized protein LOC111452535 OS=Cucurbita moschata OX=3662 GN=LOC1114525... [more]
A0A5D3D6L02.6e-5676.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CDK11.3e-5576.16uncharacterized protein LOC103499209 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..107
NoneNo IPR availablePANTHERPTHR35488:SF4SUBFAMILY NOT NAMEDcoord: 7..150
NoneNo IPR availablePANTHERPTHR35488OS05G0358900 PROTEIN-RELATEDcoord: 7..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002206Bhi01M002206mRNA