Bhi01G000763 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000763
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	heparanase-like protein 1
Location	chr1: 19831220 .. 19831492 (-)
RNA-Seq Expression	Bhi01G000763
Synteny	Bhi01G000763

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGCTATAATAGTATTGGGGCAATTATTACTGTTGCACAATATGCAAAAGATTTGATCAAGCTTATGGAAATTGTTGATCGTTTGTACAACTTCCAACAAAAGTCTTTGATTGTAGCACCTAGTACATTTTTTCATGCCTCATCGTATGAAGATCTTGTTAATGAAACATATCCTAGTGTTGTCAATGTTCCGTTTGGAGTTCAGAACGTCGATCATCGAAAAAGTCATCGACATTCTGTTCTCCAATTTTTCCAACAAAATCGTTAA

mRNA sequence

ATGGTTGGCTATAATAGTATTGGGGCAATTATTACTGTTGCACAATATGCAAAAGATTTGATCAAGCTTATGGAAATTGTTGATCGTTTGTACAACTTCCAACAAAAGTCTTTGATTGTAGCACCTAGTACATTTTTTCATGCCTCATCGTATGAAGATCTTGTTAATGAAACATATCCTAGTGTTGTCAATGTTCCGTTTGGAGTTCAGAACGTCGATCATCGAAAAAGTCATCGACATTCTGTTCTCCAATTTTTCCAACAAAATCGTTAA

Coding sequence (CDS)

ATGGTTGGCTATAATAGTATTGGGGCAATTATTACTGTTGCACAATATGCAAAAGATTTGATCAAGCTTATGGAAATTGTTGATCGTTTGTACAACTTCCAACAAAAGTCTTTGATTGTAGCACCTAGTACATTTTTTCATGCCTCATCGTATGAAGATCTTGTTAATGAAACATATCCTAGTGTTGTCAATGTTCCGTTTGGAGTTCAGAACGTCGATCATCGAAAAAGTCATCGACATTCTGTTCTCCAATTTTTCCAACAAAATCGTTAA

Protein sequence

MVGYNSIGAIITVAQYAKDLIKLMEIVDRLYNFQQKSLIVAPSTFFHASSYEDLVNETYPSVVNVPFGVQNVDHRKSHRHSVLQFFQQNR

Homology

[Close]

BLAST of Bhi01G000763 vs. NCBI nr
Match: XP_038882996.1 (heparanase-like protein 1 isoform X3 [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETY 60
           MVG+NSIGA IT AQYAKDLIKL EI+DRLY N QQK LIVAPS FF AS YEDLVN+T 
Sbjct: 122 MVGHNSIGANITAAQYAKDLIKLREIIDRLYNNSQQKPLIVAPSAFFDASWYEDLVNKTG 181

Query: 61  PSVVNV 66
            ++++V
Sbjct: 182 SNIIDV 187

[Close]

BLAST of Bhi01G000763 vs. NCBI nr
Match: XP_038882980.1 (heparanase-like protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETY 60
           MVG+NSIGA IT AQYAKDLIKL EI+DRLY N QQK LIVAPS FF AS YEDLVN+T 
Sbjct: 199 MVGHNSIGANITAAQYAKDLIKLREIIDRLYNNSQQKPLIVAPSAFFDASWYEDLVNKTG 258

Query: 61  PSVVNV 66
            ++++V
Sbjct: 259 SNIIDV 264

[Close]

BLAST of Bhi01G000763 vs. NCBI nr
Match: XP_038882987.1 (heparanase-like protein 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETY 60
           MVG+NSIGA IT AQYAKDLIKL EI+DRLY N QQK LIVAPS FF AS YEDLVN+T 
Sbjct: 199 MVGHNSIGANITAAQYAKDLIKLREIIDRLYNNSQQKPLIVAPSAFFDASWYEDLVNKTG 258

Query: 61  PSVVNV 66
            ++++V
Sbjct: 259 SNIIDV 264

[Close]

BLAST of Bhi01G000763 vs. NCBI nr
Match: XP_022157824.1 (heparanase-like protein 1 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-12
Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETY 60
           + G +SIGA ITVAQYAKDLIKL EI+DRLY N QQK LIVAP  FF  + YEDLV ET 
Sbjct: 201 LAGSHSIGASITVAQYAKDLIKLREIIDRLYNNSQQKPLIVAPGAFFDGTWYEDLVKETG 260

Query: 61  PSVVNV 66
             VVNV
Sbjct: 261 TEVVNV 266

[Close]

BLAST of Bhi01G000763 vs. NCBI nr
Match: XP_022137762.1 (heparanase-like protein 1 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-12
Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLYN--FQQKSLIVAPSTFFHASSYEDLVNET 60
           + GYNSIGA +T AQYAKDLIKL EI++RLYN    QK LIVAPS FF  S Y+DLV ET
Sbjct: 201 LAGYNSIGASVTTAQYAKDLIKLQEIINRLYNNSHLQKPLIVAPSAFFDDSWYDDLVKET 260

Query: 61  YPSVVNV 66
              VVNV
Sbjct: 261 GTGVVNV 267

[Close]

BLAST of Bhi01G000763 vs. ExPASy TrEMBL
Match: A0A6J1C964 (heparanase-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111009126 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12
Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLYN--FQQKSLIVAPSTFFHASSYEDLVNET 60
           + GYNSIGA +T AQYAKDLIKL EI++RLYN    QK LIVAPS FF  S Y+DLV ET
Sbjct: 201 LAGYNSIGASVTTAQYAKDLIKLQEIINRLYNNSHLQKPLIVAPSAFFDDSWYDDLVKET 260

Query: 61  YPSVVNV 66
              VVNV
Sbjct: 261 GTGVVNV 267

[Close]

BLAST of Bhi01G000763 vs. ExPASy TrEMBL
Match: A0A6J1DXN3 (heparanase-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111024442 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12
Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 1   MVGYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETY 60
           + G +SIGA ITVAQYAKDLIKL EI+DRLY N QQK LIVAP  FF  + YEDLV ET 
Sbjct: 201 LAGSHSIGASITVAQYAKDLIKLREIIDRLYNNSQQKPLIVAPGAFFDGTWYEDLVKETG 260

Query: 61  PSVVNV 66
             VVNV
Sbjct: 261 TEVVNV 266

[Close]

BLAST of Bhi01G000763 vs. ExPASy TrEMBL
Match: A0A6J1GWV3 (heparanase-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457886 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12
Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 3   GYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETYPS 62
           G NSIGA IT AQYAK LIKL EI+DRLY N +QK  IVAP  FF AS YED+VNET P+
Sbjct: 201 GSNSIGASITAAQYAKGLIKLREIIDRLYKNSRQKPSIVAPGAFFDASWYEDIVNETGPN 260

Query: 63  VVNV 66
           VV+V
Sbjct: 261 VVDV 264

[Close]

BLAST of Bhi01G000763 vs. ExPASy TrEMBL
Match: A0A6J1GVL8 (heparanase-like protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457886 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12
Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 3   GYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETYPS 62
           G NSIGA IT AQYAK LIKL EI+DRLY N +QK  IVAP  FF AS YED+VNET P+
Sbjct: 201 GSNSIGASITAAQYAKGLIKLREIIDRLYKNSRQKPSIVAPGAFFDASWYEDIVNETGPN 260

Query: 63  VVNV 66
           VV+V
Sbjct: 261 VVDV 264

[Close]

BLAST of Bhi01G000763 vs. ExPASy TrEMBL
Match: A0A6J1IU86 (heparanase-like protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479365 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-12
Identity = 45/64 (70.31%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 3   GYNSIGAIITVAQYAKDLIKLMEIVDRLY-NFQQKSLIVAPSTFFHASSYEDLVNETYPS 62
           GYNSIGA IT  QYAK LIKL EI+D LY N +QK  IVAPS FF AS YED VNET P+
Sbjct: 201 GYNSIGASITATQYAKGLIKLREIIDCLYKNSRQKPSIVAPSAFFDASWYEDFVNETGPN 260

Query: 63  VVNV 66
           VV+V
Sbjct: 261 VVDV 264

The following BLAST results are available for this feature:

BLAST of Bhi01G000763 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G000763 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01G000763 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882996.1	1.8e-14	72.73	heparanase-like protein 1 isoform X3 [Benincasa hispida]	[more]
XP_038882980.1	1.8e-14	72.73	heparanase-like protein 2 isoform X1 [Benincasa hispida]	[more]
XP_038882987.1	1.8e-14	72.73	heparanase-like protein 2 isoform X2 [Benincasa hispida]	[more]
XP_022157824.1	2.2e-12	69.70	heparanase-like protein 1 [Momordica charantia]	[more]
XP_022137762.1	2.2e-12	67.16	heparanase-like protein 1 [Momordica charantia]	[more]

BLAST of Bhi01G000763 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C964	1.0e-12	67.16	heparanase-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111009126 PE=3 SV...	[more]
A0A6J1DXN3	1.0e-12	69.70	heparanase-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111024442 PE=3 SV...	[more]
A0A6J1GWV3	1.8e-12	70.31	heparanase-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]
A0A6J1GVL8	1.8e-12	70.31	heparanase-like protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]
A0A6J1IU86	2.3e-12	70.31	heparanase-like protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479365...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005199	Glycoside hydrolase, family 79	PFAM	PF03662	Glyco_hydro_79n	coord: 5..65 e-value: 9.7E-11 score: 41.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000763	Bhi01M000763	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0004566	beta-glucuronidase activity
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds