Bhi01G000606 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000606
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Cytochrome b-c1 complex subunit 7
Location	chr1: 15689482 .. 15689793 (+)
RNA-Seq Expression	Bhi01G000606
Synteny	Bhi01G000606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCTTTTTGCAGTCCTTCATCGACCAAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCGTAATTATGGTAATTGAAACCCTAATCATTTCTTTTTCTATGGCGTTGATTTCGAATTTTGTTCCGTGGAGATTGATTTTGGGTTGTGTTACTATGTTAGGTCTTCAATTCGATCTGTATGATCCATATTATGATATTGATGTGAATGAGGCTTTGAATCGACTCCCCAGGGAAGTTGTTGATGCGGGCAATCAGCATTTGAAGCAGACCATGGACCTTTTCATGAAGCATTAG

mRNA sequence

ATGGCATCCTTTTTGCAGTCCTTCATCGACCAAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCGTAATTATGGTAATTGAAACCCTAATCATTTCTTTTTCTATGGCGTTGATTTCGAATTTTGTTCCGTGGAGATTGATTTTGGGTTGTGTTACTATGTTAGGTCTTCAATTCGATCTGTATGATCCATATTATGATATTGATGTGAATGAGGCTTTGAATCGACTCCCCAGGGAAGTTGTTGATGCGGGCAATCAGCATTTGAAGCAGACCATGGACCTTTTCATGAAGCATTAG

Coding sequence (CDS)

ATGGCATCCTTTTTGCAGTCCTTCATCGACCAAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCGTAATTATGGTAATTGAAACCCTAATCATTTCTTTTTCTATGGCGTTGATTTCGAATTTTGTTCCGTGGAGATTGATTTTGGGTTGTGTTACTATGTTAGGTCTTCAATTCGATCTGTATGATCCATATTATGATATTGATGTGAATGAGGCTTTGAATCGACTCCCCAGGGAAGTTGTTGATGCGGGCAATCAGCATTTGAAGCAGACCATGGACCTTTTCATGAAGCATTAG

Protein sequence

MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLGLQFDLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH

Homology

[Close]

BLAST of Bhi01G000606 vs. TAIR 10
Match: AT5G25450.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 67.4 bits (163), Expect = 7.7e-12
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 60  GLQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL++ DLYDP YD+D+ EALNRLPRE+VDA NQ L + MDL MKH
Sbjct: 32  GLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. TAIR 10
Match: AT5G25450.2 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 67.4 bits (163), Expect = 7.7e-12
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 60  GLQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL++ DLYDP YD+D+ EALNRLPRE+VDA NQ L + MDL MKH
Sbjct: 32  GLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. TAIR 10
Match: AT4G32470.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 60  GLQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL++ DLYD YY +D+ EA+NRLPREVVDA NQ LK+ MDL MKH
Sbjct: 32  GLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. TAIR 10
Match: AT4G32470.2 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 60  GLQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL++ DLYD YY +D+ EA+NRLPREVVDA NQ LK+ MDL MKH
Sbjct: 32  GLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy Swiss-Prot
Match: F4JWS8 (Cytochrome b-c1 complex subunit 7-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR7-2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 60  GLQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL++ DLYDP YD+D+ EALNRLPRE+VDA NQ L + MDL MKH
Sbjct: 32  GLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy Swiss-Prot
Match: Q9SUU5 (Cytochrome b-c1 complex subunit 7-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR7-1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 60  GLQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL++ DLYD YY +D+ EA+NRLPREVVDA NQ LK+ MDL MKH
Sbjct: 32  GLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy Swiss-Prot
Match: P48502 (Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 64  DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           DLYDP YD+DV EALNRLPRE+VDA NQ L + MDL MKH
Sbjct: 38  DLYDPMYDLDVKEALNRLPREIVDARNQRLLRAMDLSMKH 77

[Close]

BLAST of Bhi01G000606 vs. NCBI nr
Match: XP_038902376.1 (cytochrome b-c1 complex subunit 7-like [Benincasa hispida])

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 91/103 (88.35%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           M  FLQSFID KKKI DSSPDRPNASVIMVIETLI+SFSMALISNFVPWRLILGCVTMLG
Sbjct: 1   MTLFLQSFIDPKKKIRDSSPDRPNASVIMVIETLIVSFSMALISNFVPWRLILGCVTMLG 60

Query: 61  LQFDLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           LQFDLYD YYDIDV EALNRLP+EVVD GNQHLK+ MDL MKH
Sbjct: 61  LQFDLYDSYYDIDVKEALNRLPKEVVDVGNQHLKRAMDLSMKH 103

[Close]

BLAST of Bhi01G000606 vs. NCBI nr
Match: XP_038877201.1 (LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit 7-2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-13
Identity = 51/103 (49.51%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFL S ID KK  G                             F+    +  C+   G
Sbjct: 1   MASFLXSIIDPKKDCG-----------------------------FI--ARLTQCLRNYG 60

Query: 61  LQFDLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L+FDLYDPYYDIDV EALNRLPR+VVDAGNQHLK+ MDL MKH
Sbjct: 61  LRFDLYDPYYDIDVKEALNRLPRKVVDAGNQHLKRAMDLSMKH 72

[Close]

BLAST of Bhi01G000606 vs. NCBI nr
Match: XP_038886615.1 (cytochrome b-c1 complex subunit 7-2, mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-13
Identity = 51/103 (49.51%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFLQSFID KK                        F+   +      + +  C+    
Sbjct: 1   MASFLQSFIDPKKN----------------------WFARQHM------KALTQCLRNYR 60

Query: 61  LQFDLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L+FDLYDPYYDIDV EALN+LPREVVDAGNQHLK+ MDL MKH
Sbjct: 61  LRFDLYDPYYDIDVKEALNQLPREVVDAGNQHLKRAMDLSMKH 75

[Close]

BLAST of Bhi01G000606 vs. NCBI nr
Match: XP_038886616.1 (cytochrome b-c1 complex subunit 7-2, mitochondrial-like isoform X2 [Benincasa hispida])

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-13
Identity = 51/103 (49.51%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFLQSFID KK                        F+   +      + +  C+    
Sbjct: 1   MASFLQSFIDPKKN----------------------WFARQHM------KALTQCLRNYR 60

Query: 61  LQFDLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L+FDLYDPYYDIDV EALN+LPREVVDAGNQHLK+ MDL MKH
Sbjct: 61  LRFDLYDPYYDIDVKEALNQLPREVVDAGNQHLKRAMDLSMKH 75

[Close]

BLAST of Bhi01G000606 vs. NCBI nr
Match: XP_038877604.1 (cytochrome b-c1 complex subunit 7-2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-12
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 60  GLQFDLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           GL+FDLYDPYYDID+ +ALNRLPREVVDAGNQHLK+ MDL MKH
Sbjct: 101 GLRFDLYDPYYDIDMKKALNRLPREVVDAGNQHLKRAMDLSMKH 144

[Close]

BLAST of Bhi01G000606 vs. ExPASy TrEMBL
Match: A0A6P5XQS8 (Cytochrome b-c1 complex subunit 7 OS=Durio zibethinus OX=66656 GN=LOC111285391 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 48/104 (46.15%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFLQSF++ KK                     + +  M  ISN          +   G
Sbjct: 1   MASFLQSFLNPKK-------------------NWLAALHMKSISN---------RLRKYG 60

Query: 61  LQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L++ DLYDPYYD+D+ EALNRLPRE+VDA NQHLK+ MDL MKH
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQHLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy TrEMBL
Match: A0A061GNH6 (Cytochrome b-c1 complex subunit 7 OS=Theobroma cacao OX=3641 GN=TCM_038368 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 8.6e-11
Identity = 48/104 (46.15%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           M+SFLQSF+D KK                       S+  AL    +  RL        G
Sbjct: 1   MSSFLQSFLDPKK-----------------------SWLAALHMKALSTRL-----RKYG 60

Query: 61  LQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L++ DLYDPYYD+D+ EALNRLPRE+VDA NQ LK+ MDL MKH
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQRLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy TrEMBL
Match: A0A2N9ISI5 (Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10
Identity = 48/104 (46.15%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFLQSF+D KK                       +  M  ISN          +   G
Sbjct: 1   MASFLQSFLDPKK-------------------NWFAAQHMKSISN---------RLRRYG 60

Query: 61  LQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L++ DLYDPYYD+DV EALNRLPRE++DA NQ LK+ MDL MKH
Sbjct: 61  LRYDDLYDPYYDLDVKEALNRLPREIIDARNQRLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy TrEMBL
Match: A0A5C7HYE3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_013480 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 48/104 (46.15%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFLQSFID KK          N      ++T+        + N+             G
Sbjct: 1   MASFLQSFIDPKK----------NWLAAQHMKTI-----SKRLKNY-------------G 60

Query: 61  LQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L++ DLYDPYYD+D+ EALNRLPRE+VDA NQ LK+ MDL MKH
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQRLKRAMDLSMKH 76

[Close]

BLAST of Bhi01G000606 vs. ExPASy TrEMBL
Match: A0A6J1BXJ6 (Cytochrome b-c1 complex subunit 7 OS=Momordica charantia OX=3673 GN=LOC111005595 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 51/104 (49.04%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 1   MASFLQSFIDQKKKIGDSSPDRPNASVIMVIETLIISFSMALISNFVPWRLILGCVTMLG 60
           MASFLQSFID KK          N      ++ L        + NF             G
Sbjct: 1   MASFLQSFIDPKK----------NWFARQHMKAL-----SQRLRNF-------------G 60

Query: 61  LQF-DLYDPYYDIDVNEALNRLPREVVDAGNQHLKQTMDLFMKH 104
           L++ DLYDPYYDIDV EALNRLPRE+VDA NQ LK+ MDL MKH
Sbjct: 61  LRYDDLYDPYYDIDVKEALNRLPREIVDARNQRLKRAMDLSMKH 76

The following BLAST results are available for this feature:

BLAST of Bhi01G000606 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25450.1	7.7e-12	68.89	Cytochrome bd ubiquinol oxidase, 14kDa subunit	[more]
AT5G25450.2	7.7e-12	68.89	Cytochrome bd ubiquinol oxidase, 14kDa subunit	[more]
AT4G32470.1	1.3e-11	68.89	Cytochrome bd ubiquinol oxidase, 14kDa subunit	[more]
AT4G32470.2	1.3e-11	68.89	Cytochrome bd ubiquinol oxidase, 14kDa subunit	[more]

BLAST of Bhi01G000606 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JWS8	1.1e-10	68.89	Cytochrome b-c1 complex subunit 7-2, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
Q9SUU5	1.8e-10	68.89	Cytochrome b-c1 complex subunit 7-1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P48502	1.8e-10	75.00	Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]

BLAST of Bhi01G000606 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902376.1	6.0e-43	88.35	cytochrome b-c1 complex subunit 7-like [Benincasa hispida]	[more]
XP_038877201.1	1.0e-13	49.51	LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit 7-2, mitochondrial-like [Be...	[more]
XP_038886615.1	2.2e-13	49.51	cytochrome b-c1 complex subunit 7-2, mitochondrial-like isoform X1 [Benincasa hi...	[more]
XP_038886616.1	2.2e-13	49.51	cytochrome b-c1 complex subunit 7-2, mitochondrial-like isoform X2 [Benincasa hi...	[more]
XP_038877604.1	1.1e-12	84.09	cytochrome b-c1 complex subunit 7-2, mitochondrial-like [Benincasa hispida]	[more]

BLAST of Bhi01G000606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P5XQS8	1.3e-11	46.15	Cytochrome b-c1 complex subunit 7 OS=Durio zibethinus OX=66656 GN=LOC111285391 P...	[more]
A0A061GNH6	8.6e-11	46.15	Cytochrome b-c1 complex subunit 7 OS=Theobroma cacao OX=3641 GN=TCM_038368 PE=3 ...	[more]
A0A2N9ISI5	1.1e-10	46.15	Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 ...	[more]
A0A5C7HYE3	1.5e-10	46.15	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_013480 PE=3 SV=1	[more]
A0A6J1BXJ6	1.5e-10	49.04	Cytochrome b-c1 complex subunit 7 OS=Momordica charantia OX=3673 GN=LOC111005595...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003197	Cytochrome b-c1 complex subunit 7	PFAM	PF02271	UCR_14kD	coord: 57..103 e-value: 2.3E-4 score: 21.1
IPR003197	Cytochrome b-c1 complex subunit 7	PANTHER	PTHR12022	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN	coord: 58..103
IPR036544	Cytochrome b-c1 complex subunit 7 superfamily	GENE3D	1.10.1090.10		coord: 36..103 e-value: 2.0E-7 score: 32.7
IPR036544	Cytochrome b-c1 complex subunit 7 superfamily	SUPERFAMILY	81524	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 57..103
None	No IPR available	PANTHER	PTHR12022:SF9	CYTOCHROME B-C1 COMPLEX SUBUNIT 7	coord: 58..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000606	Bhi01M000606	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component	GO:0005750	mitochondrial respiratory chain complex III