Cucurbit Expression Atlas


Overview of this BioProject:

BioProjectPRJNA388584
Downy mildew-resistant cucumber(PI 197088) inoculated with Pseudoperonospora cubensis clean sequence reads within 1 day. This is a multi-time point study expression profiling of the DM-resistant cucumber PI 197088 with Ps. cubensis within the first day by RNA-sequencing. The primary objective of this study was to identify resistance-related genes and reveal cucumber early response process. In total, this work contributes to a better understanding regarding of the molecular processes and resistance mechanisms in response to Ps. cubensis infection.

Properties this BioBroject:

Property NameValue
Data typeTranscriptome or Gene expression
Sample scopeMultiisolate
MaterialTranscriptome
CaptureRandomSurvey
Experimental_design
# DMR: Downy mildew-resistant
# hpi: hours post-infection

BioSamples of this BioProject:

BioSampleOrganismDescription
DMR_cucumber_0hpiCucumberThe DM-resistant cucumber PI 197088 with mock treatment ; treatment : NA; tissue : leaf; geo_loc_name : China: Yangling; dev_stage : 1 true leaf; cultivar : PI 197088;
DMR_cucumber_6hpiCucumberThe DM-resistant cucumber PI 197088 leaf at 6 hours post-inoculation with Ps. Cubensis ; treatment : Ps. Cubensis with 6 hours; tissue : leaf; geo_loc_name : China: Yangling; dev_stage : 1 true leaf; cultivar : PI 197088;
DMR_cucumber_24hpiCucumberThe DM-resistant cucumber PI 197088 leaf at 6 hours post-inoculation with Ps. Cubensis ; treatment : Ps. Cubensis with 24 hours; tissue : leaf; geo_loc_name : China: Yangling; dev_stage : 1 true leaf; cultivar : PI 197088;