Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTTGGAGAAGAAAGCTCCCGGTTTGGGTCCTTGCCTGCTACAACTTCTAGAAATTTGTCGTCATCGTCTTCGACGTTCTTTTCAGCACTCCCTTCGCCGTTCTTTTCTCCACGGTCATCGACATGTCGAAGGTCAGAAGCAACAAAGGCTGACATGGGATGTGAAAGCATGGACTTCAGAGTTGATCCGCTAAACTCAAGTGTGGTGGTGCCAGATTCTGAATCTTTGTTGAAAGCTAAATTTGCAGTTTCGGATTTGATTCGAAATCCAGAAACTTGTACTCCAGGTGATTGTCGGAAGCTCGATCAGGCTTCGTCGTCAACTGGTGTATCTGGAAGTACTCCTTATAGTAGAAGCCTTCCTCATGGAAATAACTATTTGAGGCCTAGAGAAATGTACAAAAAGCTTAGTAGAAGTAACTTTACTTCTTACACAGCCGATCCGATTTCGATTTCCTCGACTAGACTAAGGAGTTATGATGTTTTCATAGGTTTGCACGGTTCCAAGCCTTCATTGCTGCGGTTTGCTAATTGGCTTCAAGCAGAGATGGAGGTTCATGGGATGAGTTGCTTTGTGTCTGATAGAGCAAAATGTAGGAATTCTCGCAAGCATCGAGTCATTGAGAGGGCGATGGATGCATCCTCGTTTGGAGTTGTGATTCTAACAAAGAAGTCGTTCCAGAATCCTTACACCATCGAGGAGCTGCGGTTTTTTTCTGGTAAGAAGAACTTGGTTCCAATATTTTTTGACTTGAGTCCAGGAGATTGTCTTGCCAGAGACATTGTGGAGAAAAGGGGAGATTTGTGGGAAAAACATGGTGGTGACTTGTGGATTCTGTATGGAGGATTGGAGAAGGAATGGAAAGAAGCCATCAAAGGGCTTTGTCGGGTCGACGAGTGGAAATTCGAAGCTCAGAATGGTAACTGGAGGGATTGCATACTGAAAGCCGTTATGCTACTTGCAATGAGGTTGGGAAGGCGAAGCATTGTCGAGCGCTTGACGAAATGGAGGGAGAAGGTAGAGAAAGAAGAGTTCCCTTTCCCCCGAAACGAGAATTTCGTAGGCAGGAAGAAAGAATTATCAGAGCTAGAGTTCATACTTTTTGGCAATGTAGCTGGTGATTCCGAAAGAGATTACTTCGAACTTATAGCTCGACCGAGACGAAAGAATCTGACCCTTGGCTGCAGTAAAAGCAGCTCACTTGAAGAGAAACAGCACCAACAAGCAGTAGAAACACGAAACAAGAAGGGTAAAGAACCTATTGTGTGGAAGGAGTCTGAAAAAGAGATCGAAATGCAAAGCATTGAATTTCCTCAGCGGCATCGACGACTGAAGACAAAAAGTGGCGAAAGGTATGCCAAGAGAAAGAAAACAGCCAAAATTTTGTACGGAAAAGGTATAGCTTGTGTTTCGGGGGACTCGGGAATCGGTAAGACCGAGCTTCTTTTAGAATTCGCGTATCGACATCACCAAAAGTACAAGATGGTTTTATGGATTGGAGGTGAAAGCAGATATATCAGGCAGAATTATCTGAACTTAGGTTCCTTCCTAGAAGTTGATGTAGGATTTGGAAGTTTTTCAGCTAAAAGCAAGATCAAGAATTTTGAGGAGCAGGAAGAGGCAGCCATTTCAAGAATTCGTACAGAGCTGATGAGAAACGTTCCATTTTTGCTGATAATCGATAATTTAGAGTGCGAAAAGGATTGGTGGGATCACAAACTTGTGATGGATCTTCTCCCTCGTTTTGGTGGCGAGACGCATATCATAATATCCACTCGACTTCCTCGTGTAATGAATTTGGAACCGTTGAAACTGTCTTACTTGTCGGGGGCTGAAGCAATGTGTTTAATGCAAGGAAGCGTTCGAGACTACTCGATTGCAGAGATCGATGTTTTGAGAATGATCGAAGAGAAAGTTGGAAGGTTAACGTTAGGCCTTGCGATAATTGGTGCGATCTTATCCGAGCTTCCCATAACACCAACTAGATTGTTGGATACAACCAATAGAATGCCTGTCAAAGATCAATCATGGAGTGGTAGAGAAGCTCATGTTTTCCGACGCAATACGTTCCTTATGCAGCTTTTCGAAGTGTGTTTCTCCATTTTCGACCATGCCGAGGGGCCACGGAGCTTGGCAACTAGAATGGCTCTAGCGAGTGGTTGGTTCGGTCCTGCTGCTATTCCCATTTCGCAATTAGCCCTTGCAGCTCACAAGATACCCGAAAAGCGACAGCGAACGAGGTTATGGAAGAAGTTGTTACGTTCCATGGCTTGTGGTATTACTTCATCTTACATGAAAAAGTCAGAAGCGGAAGCAACTTCCATGCTGTTAAGGTTCAATATGGCAAGAAGCAGTGCCAAACAGGGATGCCTACATTTCAATGATCTCGTAAAGCTATATGCGCGCAAGAGAGGCGTGGACGGAGTTGCACAAGCAATGGTTCAAGCTGTCATGACGCGCCCCTCGATCATTCATCACTCCGAACATTTGTGGGCAGCTTGTTTCTTGCTCTTCGGGTTCGGTCGGGACCCTGTAGTCGTCGAACTCAAAGTCTCGGAGCTATTGTACGTCATAAAAGAAGTGGTCTTGCCGCTTGCCGTGAGGACATTTCTCACATTCTCCCAATGCACCACCGCGTTGGAACTTCTCCGGCTATGCACAAACGCATTAGAAGCTGCCGATCAAGCCTTCGTCACACCGGTCGAGAAGTGGTTCGATAAGTCGCTTTGCTGGAGGCCAGTTCAAACAACTGCACAGCTGAATCCTTATCTTTGGCAGGAGCTAGCTCTGTGCAGAGCAACATTATTAGAAACCCGAGCAAGGCTAATGCTAAGAGGGGGACAATTCGACATCGGGGACGATCTAATCCGAAAGGCCATCTTCATCAGAACTTCGATATCAGGCGAGGATCATCCAGATACAAAATCTGCTCGAGAAACTCTCGGTAAACTCAATAGGCTTATTGCTAATTTCCATATTCATTCTCCTCCATAG mRNA sequence
ATGGACGTTGGAGAAGAAAGCTCCCGGTTTGGGTCCTTGCCTGCTACAACTTCTAGAAATTTGTCGTCATCGTCTTCGACGTTCTTTTCAGCACTCCCTTCGCCGTTCTTTTCTCCACGGTCATCGACATGTCGAAGGTCAGAAGCAACAAAGGCTGACATGGGATGTGAAAGCATGGACTTCAGAGTTGATCCGCTAAACTCAAGTGTGGTGGTGCCAGATTCTGAATCTTTGTTGAAAGCTAAATTTGCAGTTTCGGATTTGATTCGAAATCCAGAAACTTGTACTCCAGGTGATTGTCGGAAGCTCGATCAGGCTTCGTCGTCAACTGGTGTATCTGGAAGTACTCCTTATAGTAGAAGCCTTCCTCATGGAAATAACTATTTGAGGCCTAGAGAAATGTACAAAAAGCTTAGTAGAAGTAACTTTACTTCTTACACAGCCGATCCGATTTCGATTTCCTCGACTAGACTAAGGAGTTATGATGTTTTCATAGGTTTGCACGGTTCCAAGCCTTCATTGCTGCGGTTTGCTAATTGGCTTCAAGCAGAGATGGAGGTTCATGGGATGAGTTGCTTTGTGTCTGATAGAGCAAAATGTAGGAATTCTCGCAAGCATCGAGTCATTGAGAGGGCGATGGATGCATCCTCGTTTGGAGTTGTGATTCTAACAAAGAAGTCGTTCCAGAATCCTTACACCATCGAGGAGCTGCGGTTTTTTTCTGGTAAGAAGAACTTGGTTCCAATATTTTTTGACTTGAGTCCAGGAGATTGTCTTGCCAGAGACATTGTGGAGAAAAGGGGAGATTTGTGGGAAAAACATGGTGGTGACTTGTGGATTCTGTATGGAGGATTGGAGAAGGAATGGAAAGAAGCCATCAAAGGGCTTTGTCGGGTCGACGAGTGGAAATTCGAAGCTCAGAATGGTAACTGGAGGGATTGCATACTGAAAGCCGTTATGCTACTTGCAATGAGGTTGGGAAGGCGAAGCATTGTCGAGCGCTTGACGAAATGGAGGGAGAAGGTAGAGAAAGAAGAGTTCCCTTTCCCCCGAAACGAGAATTTCGTAGGCAGGAAGAAAGAATTATCAGAGCTAGAGTTCATACTTTTTGGCAATGTAGCTGGTGATTCCGAAAGAGATTACTTCGAACTTATAGCTCGACCGAGACGAAAGAATCTGACCCTTGGCTGCAGTAAAAGCAGCTCACTTGAAGAGAAACAGCACCAACAAGCAGTAGAAACACGAAACAAGAAGGGTAAAGAACCTATTGTGTGGAAGGAGTCTGAAAAAGAGATCGAAATGCAAAGCATTGAATTTCCTCAGCGGCATCGACGACTGAAGACAAAAAGTGGCGAAAGGTATGCCAAGAGAAAGAAAACAGCCAAAATTTTGTACGGAAAAGGTATAGCTTGTGTTTCGGGGGACTCGGGAATCGGTAAGACCGAGCTTCTTTTAGAATTCGCGTATCGACATCACCAAAAGTACAAGATGGTTTTATGGATTGGAGGTGAAAGCAGATATATCAGGCAGAATTATCTGAACTTAGGTTCCTTCCTAGAAGTTGATGTAGGATTTGGAAGTTTTTCAGCTAAAAGCAAGATCAAGAATTTTGAGGAGCAGGAAGAGGCAGCCATTTCAAGAATTCGTACAGAGCTGATGAGAAACGTTCCATTTTTGCTGATAATCGATAATTTAGAGTGCGAAAAGGATTGGTGGGATCACAAACTTGTGATGGATCTTCTCCCTCGTTTTGGTGGCGAGACGCATATCATAATATCCACTCGACTTCCTCGTGTAATGAATTTGGAACCGTTGAAACTGTCTTACTTGTCGGGGGCTGAAGCAATGTGTTTAATGCAAGGAAGCGTTCGAGACTACTCGATTGCAGAGATCGATGTTTTGAGAATGATCGAAGAGAAAGTTGGAAGGTTAACGTTAGGCCTTGCGATAATTGGTGCGATCTTATCCGAGCTTCCCATAACACCAACTAGATTGTTGGATACAACCAATAGAATGCCTGTCAAAGATCAATCATGGAGTGGTAGAGAAGCTCATGTTTTCCGACGCAATACGTTCCTTATGCAGCTTTTCGAAGTGTGTTTCTCCATTTTCGACCATGCCGAGGGGCCACGGAGCTTGGCAACTAGAATGGCTCTAGCGAGTGGTTGGTTCGGTCCTGCTGCTATTCCCATTTCGCAATTAGCCCTTGCAGCTCACAAGATACCCGAAAAGCGACAGCGAACGAGGTTATGGAAGAAGTTGTTACGTTCCATGGCTTGTGGTATTACTTCATCTTACATGAAAAAGTCAGAAGCGGAAGCAACTTCCATGCTGTTAAGGTTCAATATGGCAAGAAGCAGTGCCAAACAGGGATGCCTACATTTCAATGATCTCGTAAAGCTATATGCGCGCAAGAGAGGCGTGGACGGAGTTGCACAAGCAATGGTTCAAGCTGTCATGACGCGCCCCTCGATCATTCATCACTCCGAACATTTGTGGGCAGCTTGTTTCTTGCTCTTCGGGTTCGGTCGGGACCCTGTAGTCGTCGAACTCAAAGTCTCGGAGCTATTGTACGTCATAAAAGAAGTGGTCTTGCCGCTTGCCGTGAGGACATTTCTCACATTCTCCCAATGCACCACCGCGTTGGAACTTCTCCGGCTATGCACAAACGCATTAGAAGCTGCCGATCAAGCCTTCGTCACACCGGTCGAGAAGTGGTTCGATAAGTCGCTTTGCTGGAGGCCAGTTCAAACAACTGCACAGCTGAATCCTTATCTTTGGCAGGAGCTAGCTCTGTGCAGAGCAACATTATTAGAAACCCGAGCAAGGCTAATGCTAAGAGGGGGACAATTCGACATCGGGGACGATCTAATCCGAAAGGCCATCTTCATCAGAACTTCGATATCAGGCGAGGATCATCCAGATACAAAATCTGCTCGAGAAACTCTCGGTAAACTCAATAGGCTTATTGCTAATTTCCATATTCATTCTCCTCCATAG Coding sequence (CDS)
ATGGACGTTGGAGAAGAAAGCTCCCGGTTTGGGTCCTTGCCTGCTACAACTTCTAGAAATTTGTCGTCATCGTCTTCGACGTTCTTTTCAGCACTCCCTTCGCCGTTCTTTTCTCCACGGTCATCGACATGTCGAAGGTCAGAAGCAACAAAGGCTGACATGGGATGTGAAAGCATGGACTTCAGAGTTGATCCGCTAAACTCAAGTGTGGTGGTGCCAGATTCTGAATCTTTGTTGAAAGCTAAATTTGCAGTTTCGGATTTGATTCGAAATCCAGAAACTTGTACTCCAGGTGATTGTCGGAAGCTCGATCAGGCTTCGTCGTCAACTGGTGTATCTGGAAGTACTCCTTATAGTAGAAGCCTTCCTCATGGAAATAACTATTTGAGGCCTAGAGAAATGTACAAAAAGCTTAGTAGAAGTAACTTTACTTCTTACACAGCCGATCCGATTTCGATTTCCTCGACTAGACTAAGGAGTTATGATGTTTTCATAGGTTTGCACGGTTCCAAGCCTTCATTGCTGCGGTTTGCTAATTGGCTTCAAGCAGAGATGGAGGTTCATGGGATGAGTTGCTTTGTGTCTGATAGAGCAAAATGTAGGAATTCTCGCAAGCATCGAGTCATTGAGAGGGCGATGGATGCATCCTCGTTTGGAGTTGTGATTCTAACAAAGAAGTCGTTCCAGAATCCTTACACCATCGAGGAGCTGCGGTTTTTTTCTGGTAAGAAGAACTTGGTTCCAATATTTTTTGACTTGAGTCCAGGAGATTGTCTTGCCAGAGACATTGTGGAGAAAAGGGGAGATTTGTGGGAAAAACATGGTGGTGACTTGTGGATTCTGTATGGAGGATTGGAGAAGGAATGGAAAGAAGCCATCAAAGGGCTTTGTCGGGTCGACGAGTGGAAATTCGAAGCTCAGAATGGTAACTGGAGGGATTGCATACTGAAAGCCGTTATGCTACTTGCAATGAGGTTGGGAAGGCGAAGCATTGTCGAGCGCTTGACGAAATGGAGGGAGAAGGTAGAGAAAGAAGAGTTCCCTTTCCCCCGAAACGAGAATTTCGTAGGCAGGAAGAAAGAATTATCAGAGCTAGAGTTCATACTTTTTGGCAATGTAGCTGGTGATTCCGAAAGAGATTACTTCGAACTTATAGCTCGACCGAGACGAAAGAATCTGACCCTTGGCTGCAGTAAAAGCAGCTCACTTGAAGAGAAACAGCACCAACAAGCAGTAGAAACACGAAACAAGAAGGGTAAAGAACCTATTGTGTGGAAGGAGTCTGAAAAAGAGATCGAAATGCAAAGCATTGAATTTCCTCAGCGGCATCGACGACTGAAGACAAAAAGTGGCGAAAGGTATGCCAAGAGAAAGAAAACAGCCAAAATTTTGTACGGAAAAGGTATAGCTTGTGTTTCGGGGGACTCGGGAATCGGTAAGACCGAGCTTCTTTTAGAATTCGCGTATCGACATCACCAAAAGTACAAGATGGTTTTATGGATTGGAGGTGAAAGCAGATATATCAGGCAGAATTATCTGAACTTAGGTTCCTTCCTAGAAGTTGATGTAGGATTTGGAAGTTTTTCAGCTAAAAGCAAGATCAAGAATTTTGAGGAGCAGGAAGAGGCAGCCATTTCAAGAATTCGTACAGAGCTGATGAGAAACGTTCCATTTTTGCTGATAATCGATAATTTAGAGTGCGAAAAGGATTGGTGGGATCACAAACTTGTGATGGATCTTCTCCCTCGTTTTGGTGGCGAGACGCATATCATAATATCCACTCGACTTCCTCGTGTAATGAATTTGGAACCGTTGAAACTGTCTTACTTGTCGGGGGCTGAAGCAATGTGTTTAATGCAAGGAAGCGTTCGAGACTACTCGATTGCAGAGATCGATGTTTTGAGAATGATCGAAGAGAAAGTTGGAAGGTTAACGTTAGGCCTTGCGATAATTGGTGCGATCTTATCCGAGCTTCCCATAACACCAACTAGATTGTTGGATACAACCAATAGAATGCCTGTCAAAGATCAATCATGGAGTGGTAGAGAAGCTCATGTTTTCCGACGCAATACGTTCCTTATGCAGCTTTTCGAAGTGTGTTTCTCCATTTTCGACCATGCCGAGGGGCCACGGAGCTTGGCAACTAGAATGGCTCTAGCGAGTGGTTGGTTCGGTCCTGCTGCTATTCCCATTTCGCAATTAGCCCTTGCAGCTCACAAGATACCCGAAAAGCGACAGCGAACGAGGTTATGGAAGAAGTTGTTACGTTCCATGGCTTGTGGTATTACTTCATCTTACATGAAAAAGTCAGAAGCGGAAGCAACTTCCATGCTGTTAAGGTTCAATATGGCAAGAAGCAGTGCCAAACAGGGATGCCTACATTTCAATGATCTCGTAAAGCTATATGCGCGCAAGAGAGGCGTGGACGGAGTTGCACAAGCAATGGTTCAAGCTGTCATGACGCGCCCCTCGATCATTCATCACTCCGAACATTTGTGGGCAGCTTGTTTCTTGCTCTTCGGGTTCGGTCGGGACCCTGTAGTCGTCGAACTCAAAGTCTCGGAGCTATTGTACGTCATAAAAGAAGTGGTCTTGCCGCTTGCCGTGAGGACATTTCTCACATTCTCCCAATGCACCACCGCGTTGGAACTTCTCCGGCTATGCACAAACGCATTAGAAGCTGCCGATCAAGCCTTCGTCACACCGGTCGAGAAGTGGTTCGATAAGTCGCTTTGCTGGAGGCCAGTTCAAACAACTGCACAGCTGAATCCTTATCTTTGGCAGGAGCTAGCTCTGTGCAGAGCAACATTATTAGAAACCCGAGCAAGGCTAATGCTAAGAGGGGGACAATTCGACATCGGGGACGATCTAATCCGAAAGGCCATCTTCATCAGAACTTCGATATCAGGCGAGGATCATCCAGATACAAAATCTGCTCGAGAAACTCTCGGTAAACTCAATAGGCTTATTGCTAATTTCCATATTCATTCTCCTCCATAG Protein sequence
MDVGEESSRFGSLPATTSRNLSSSSSTFFSALPSPFFSPRSSTCRRSEATKADMGCESMDFRVDPLNSSVVVPDSESLLKAKFAVSDLIRNPETCTPGDCRKLDQASSSTGVSGSTPYSRSLPHGNNYLRPREMYKKLSRSNFTSYTADPISISSTRLRSYDVFIGLHGSKPSLLRFANWLQAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGVVILTKKSFQNPYTIEELRFFSGKKNLVPIFFDLSPGDCLARDIVEKRGDLWEKHGGDLWILYGGLEKEWKEAIKGLCRVDEWKFEAQNGNWRDCILKAVMLLAMRLGRRSIVERLTKWREKVEKEEFPFPRNENFVGRKKELSELEFILFGNVAGDSERDYFELIARPRRKNLTLGCSKSSSLEEKQHQQAVETRNKKGKEPIVWKESEKEIEMQSIEFPQRHRRLKTKSGERYAKRKKTAKILYGKGIACVSGDSGIGKTELLLEFAYRHHQKYKMVLWIGGESRYIRQNYLNLGSFLEVDVGFGSFSAKSKIKNFEEQEEAAISRIRTELMRNVPFLLIIDNLECEKDWWDHKLVMDLLPRFGGETHIIISTRLPRVMNLEPLKLSYLSGAEAMCLMQGSVRDYSIAEIDVLRMIEEKVGRLTLGLAIIGAILSELPITPTRLLDTTNRMPVKDQSWSGREAHVFRRNTFLMQLFEVCFSIFDHAEGPRSLATRMALASGWFGPAAIPISQLALAAHKIPEKRQRTRLWKKLLRSMACGITSSYMKKSEAEATSMLLRFNMARSSAKQGCLHFNDLVKLYARKRGVDGVAQAMVQAVMTRPSIIHHSEHLWAACFLLFGFGRDPVVVELKVSELLYVIKEVVLPLAVRTFLTFSQCTTALELLRLCTNALEAADQAFVTPVEKWFDKSLCWRPVQTTAQLNPYLWQELALCRATLLETRARLMLRGGQFDIGDDLIRKAIFIRTSISGEDHPDTKSARETLGKLNRLIANFHIHSPP
Homology
BLAST of CmaCh02G014400 vs. TAIR 10
Match:
AT4G23440.1 (Disease resistance protein (TIR-NBS class) )
HSP 1 Score: 1272.7 bits (3292), Expect = 0.0e+00
Identity = 658/1009 (65.21%), Postives = 795/1009 (78.79%), Query Frame = 0
Query: 1 MDVGEESSRFGSLPATTSRNLSSSSS-TFFSALPSPFFSPRSSTCRR--SEATKADMGCE 60 MD +SSRFG P +RN+SSSSS FFSA SPFFSPRS ++ SE+T++D C+ Sbjct: 1 MDSRGDSSRFGQYPTKPTRNMSSSSSAAFFSANQSPFFSPRSPKIQQELSESTRSDAQCD 60 Query: 61 SMDFRVDPLNSSVVVPDSESLLKAKFAVSDLIRNPETCTPGDCRKLDQAS--SSTGVSGS 120 S DPL+SS + E P C+ L+ A +S+ + Sbjct: 61 SF----DPLSSSSGFQEPELAF--------------LTAPNQCQSLEAADRIASSSMISC 120 Query: 121 TPYSRSLPHGNNYLRPREMYKKLSRSNFTSYT-ADPISISSTRLRSYDVFIGLHGSKPSL 180 TP + Y R E +SYT +S+S RLR DVFIGL+G KPSL Sbjct: 121 TP--------SRYGRGHES---------SSYTQTSSVSVSYNRLRCCDVFIGLYGQKPSL 180 Query: 181 LRFANWLQAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGVVILTKKSFQNPYTI 240 LRFA+WL+AE+E GMSCF+SDR +CR+SRK R++ERAMD +SFGV+ILT+K+F+NPYTI Sbjct: 181 LRFADWLRAELEFQGMSCFMSDRGRCRSSRKQRIVERAMDGASFGVIILTRKAFKNPYTI 240 Query: 241 EELRFFSGKKNLVPIFFDLSPGDCLARDIVEKRGDLWEKHGGDLWILYGGLEKEWKEAIK 300 EELRFF+ KKNLVP+FFDLSPG+CL RDIVEKRGDLWEKHGG+LW+LYGG+EKEWKEA+ Sbjct: 241 EELRFFANKKNLVPVFFDLSPGECLVRDIVEKRGDLWEKHGGELWVLYGGIEKEWKEAVH 300 Query: 301 GLCRVDEWKFEAQNGNWRDCILKAVMLLAMRLGRRSIVERLTKWREKVEKEEFPFPRNEN 360 GL RVD+WK EA GNWRDC+ +AV LLAMRLGRRSIVERLTKWR+K EKEEFP+PRNE+ Sbjct: 301 GLSRVDDWKLEAHEGNWRDCVFRAVTLLAMRLGRRSIVERLTKWRDKAEKEEFPYPRNES 360 Query: 361 FVGRKKELSELEFILFGNVAGDSERDYFELIARP--RRKNLTLGCSKSSSLEEKQHQQAV 420 FVGRKKELSELEF+LFG+VAGDSERDYFEL ARP R+KN+TLG +KS S EE Sbjct: 361 FVGRKKELSELEFVLFGDVAGDSERDYFELKARPTRRKKNVTLGWNKSGSAEE------- 420 Query: 421 ETRNKKGKEPIVWKESEKEIEMQSIEFPQRHRRLKTKSGERYAKRKKTAKILYGKGIACV 480 R KKGKE +VWKESEKEIEMQS E P R + K G R +RK++ K++YGKG+ACV Sbjct: 421 --RRKKGKEKVVWKESEKEIEMQSTEMPSRS---QVKVG-RNTRRKRSMKVVYGKGVACV 480 Query: 481 SGDSGIGKTELLLEFAYRHHQKYKMVLWIGGESRYIRQNYLNLGSFLEVDVGFGSFSAKS 540 SG+SGIGKTELLLEFAYRHHQ+YKMVLWIGGESRYIRQNYLNL +LEVD+G + S K+ Sbjct: 481 SGESGIGKTELLLEFAYRHHQRYKMVLWIGGESRYIRQNYLNLYQYLEVDIGIENSSDKT 540 Query: 541 KIKNFEEQEEAAISRIRTELMRNVPFLLIIDNLECEKDWWDHKLVMDLLPRFGGETHIII 600 ++K+FEEQE+AA+S+IR ELMRN+PFL++IDNLE EKDWWD KLVMDLLPRFGG THI+I Sbjct: 541 RMKSFEEQEDAAVSKIRKELMRNIPFLVVIDNLESEKDWWDSKLVMDLLPRFGGGTHILI 600 Query: 601 STRLPRVMNLEPLKLSYLSGAEAMCLMQGSVRDYSIAEIDVLRMIEEKVGRLTLGLAIIG 660 STRL +VMN+EPLKLSYLSGAEAM LMQG+V+DY ++E+D LR IE+K+GRLTLGLA++G Sbjct: 601 STRLSQVMNMEPLKLSYLSGAEAMSLMQGNVKDYPVSEMDALRTIEDKLGRLTLGLAVVG 660 Query: 661 AILSELPITPTRLLDTTNRMPVKDQSWSGREAHVFRRNTFLMQLFEVCFSIFDHAEGPRS 720 AILSELPI P+RLLDT NRMP+++ SGRE ++ RRN FL+QLFEVCFSIFDHA+GPRS Sbjct: 661 AILSELPINPSRLLDTINRMPLREMVCSGREGNLLRRNAFLLQLFEVCFSIFDHADGPRS 720 Query: 721 LATRMALASGWFGPAAIPISQLALAAHKIPEK-RQRTRLWKKLLRSMACGITSSYMKKSE 780 LATRM +ASGW PA +P S LALAAHK+PEK R RLW++L R++ CG TSS K+S Sbjct: 721 LATRMVVASGWLAPAPVPASLLALAAHKLPEKHRGPKRLWRRLRRAITCGFTSSNSKRSG 780 Query: 781 AEATSMLLRFNMAR-SSAKQGCLHFNDLVKLYARKRG-VDGVAQAMVQAVMTRPSIIHHS 840 AEA SMLLRFN+AR SS K G + ++LVKLYAR R V+ A AMVQAV++R S + + Sbjct: 781 AEAASMLLRFNIARTSSIKLGFIQIHELVKLYARNRVLVNENAPAMVQAVISRGSTVETA 840 Query: 841 EHLWAACFLLFGFGRDPVVVELKVSELLYVIKEVVLPLAVRTFLTFSQCTTALELLRLCT 900 E +WA CFLLFGF + ++LK++ELL ++K+V+LPLA+RTF++FS+CT ++ELLR+CT Sbjct: 841 EQIWAVCFLLFGFSNESPTIQLKITELLILVKQVILPLAIRTFISFSRCTASVELLRVCT 900 Query: 901 NALEAADQAFVTPVEKWFDKSLCWRPVQTTAQLNPYLWQELALCRATLLETRARLMLRGG 960 NALEAADQ VTPVEKW DKSLCWRPVQT+AQLNP LW+ELAL RAT+LETRA+LMLRGG Sbjct: 901 NALEAADQTLVTPVEKWLDKSLCWRPVQTSAQLNPILWEELALARATVLETRAKLMLRGG 960 Query: 961 QFDIGDDLIRKAIFIRTSISGEDHPDTKSARETLGKLNRLIANFH-IHS 998 QF + DDLIRKAIFIRTSISGEDHP T SARETL KL RL++N H IH+ Sbjct: 961 QFGLADDLIRKAIFIRTSISGEDHPGTVSARETLSKLTRLLSNVHQIHN 961
BLAST of CmaCh02G014400 vs. TAIR 10
Match:
AT5G56220.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 603.2 bits (1554), Expect = 3.8e-172
Identity = 374/1009 (37.07%), Postives = 579/1009 (57.38%), Query Frame = 0
Query: 2 DVGEESSRFGSLPATTSRNLSSSSSTFFSALPSPFFSPR----SSTCRRSEATKADMGCE 61 + + S + P + +S SS F SAL SP+ SPR S T + + G + Sbjct: 38 NASDSSPSIKNSPFYSPSLVSPPSSAFVSALQSPYISPRATTPSITTHKPSPPLSYKGSQ 97 Query: 62 SMDFRVDPLNSSVVVPDSESLLKAKFAVSDLIRNPETCTPGDCRKLDQASSSTGVSGSTP 121 S D + SS P S+ ++ SD P D RKL ++S T Sbjct: 98 S-----DDVPSSSYTPPSD-----QYEFSDE-------QPSD-RKLKLSASCTPDPAPPR 157 Query: 122 YSRSLPHGNNYLRPREMYKKLSRSNFTSYTADPISISSTRLRSYDVFIGLHGSKPSLLRF 181 S S P PR K+S S+ ++T+LRS DVFIG HG P+L+RF Sbjct: 158 ISFSFP------VPRVSLAKVSVSS---------PATNTKLRSSDVFIGFHGQNPNLVRF 217 Query: 182 ANWLQAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGVVILTKKSFQNPYTIEEL 241 WL++E+E+ G++CFV+DRAK +++ H + +R + + ++G+V+++ S N ++EE+ Sbjct: 218 CKWLKSELELQGIACFVADRAKYSDTQSHEIADRVICSVTYGIVVVSCSSLLNYLSLEEV 277 Query: 242 RFFSGKKNLVPIFFDLSPGDCLARDIVEKRGDLWEKHGGDLWILYGGLEKEWKEAIKGLC 301 RFF+ KKNL+PIF+ P + + + ++KE KEAI GL Sbjct: 278 RFFAQKKNLIPIFYGTGPSEIMG------------------LLNCNAIDKECKEAIDGLI 337 Query: 302 RVDEWKFEAQNGNWRDCILKAVMLLAMRLGRRSIVERLTKWREKVEK-EEFPFPRNENFV 361 + E+K EA NWR C+ K +L +LGR+S+ + +E VE +E PFPRN +F+ Sbjct: 338 KSHEFKLEANESNWRSCVGKTATILRAKLGRKSVAD-----KEIVEGIDELPFPRNRSFL 397 Query: 362 GRKKELSELEFILFGNVAGDSERDYFELIARPRRKNLTLGCSKSSSLEEKQHQQAVETRN 421 GR+KE+ E+E LFGN +Y E P + G S+ + EE V TRN Sbjct: 398 GREKEIIEMEMALFGN------GEYLE-STTPSTRGEASGQSEGLADEE---SDVVPTRN 457 Query: 422 KKGKEPIVWKESEKEIEMQSIEFPQRH---RRLKTKSGERYAKRKKTAKILYGKGIACVS 481 K + + S+ E S ++ R LKTK + K + ++ CV+ Sbjct: 458 GKFISLELGRCSDSRSEAWSDPNGGKNSLKRLLKTKKCRNNSNCKSSTSVV------CVN 517 Query: 482 GDSGIGKTELLLEFAYRHHQKYKMVLWIGGESRYIRQNYLNLGSFLEVDVGFGSFSAKSK 541 G GIGKTEL LEFAYR+ Q+YKMVLW+GGE+RY RQN LNL L +DV + + + Sbjct: 518 GVPGIGKTELALEFAYRYSQRYKMVLWVGGEARYFRQNLLNLSFSLGLDVSADAEKDRGR 577 Query: 542 IKNFEEQEEAAISRIRTELMRNVPFLLIIDNLECEKDWWDHKLVMDLLPRFGGETHIIIS 601 +++F+EQE A RI+ EL R++P+LLIIDNLE EKDWW+ K + DL+PR G TH++I+ Sbjct: 578 LRSFDEQEFEAFKRIKRELFRDMPYLLIIDNLEIEKDWWEGKDLNDLIPRNTGGTHVLIT 637 Query: 602 TRLPRVMNLEPLKLSYLSGAEAMCLMQG-SVRDYSIAEIDVLRMIEEKVGRLTLGLAIIG 661 TRLP+VM + ++LS L ++AM L++G +DY + E++VL++ +EK+GRL+ GL ++G Sbjct: 638 TRLPKVMTFDTVQLSILPSSDAMVLLRGRRKKDYPVEEVEVLKLFDEKLGRLSYGLWVVG 697 Query: 662 AILSELPITPTRLLDTTNRMPVKDQSWSG----REAHVFRRNTFLMQLFEVCFSIFDHAE 721 ++LSEL I P+ L + N++ ++++S S + + N F+ ++ ++ + AE Sbjct: 698 SLLSELAILPSALFEAVNKVQIEERSASPFLNLNDEQYCKSNPFVAKVLAFSLAVLEQAE 757 Query: 722 GPRS-LATRMALASGWFGPAAIPISQLALAAHKIPEKRQRTRLWKKLLRSM-----ACGI 781 G R+ L+ +M L WF P IP++ LA AA +P R W K L CG+ Sbjct: 758 GNRNLLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKWNKCLSHTFAWCGGCGL 817 Query: 782 TSSYMKKSEAEATSMLLRFNMARSSAKQ-GC-LHFNDLVKLYARKRGVDGVAQAMVQAVM 841 ++SE +A +L+R +AR + +Q GC + F+ + + +AR+R +A VQ V Sbjct: 818 G----RRSEEDAAFLLVRLGLARLTNRQPGCWIQFHPITQTFARRRDYILAPKATVQGVR 877 Query: 842 TRPSIIHHSEHLWAACFLLFGFGRDPVVVELKVSELLYVIKEVVLPLAVRTFLTFSQCTT 901 + + + +HLWA+ FL+FGF +P +V+L+ +++ IK LPLA+ F TFS+C + Sbjct: 878 KIDNPLLNLDHLWASAFLVFGFKSEPPLVQLQAMDMVLYIKRTALPLAITAFTTFSRCNS 937 Query: 902 ALELLRLCTNALEAADQAFVTPVEKWFDKSLCWRPVQTTAQLNPYLWQELALCRATLLET 961 ALELL++CTN LE +++FV+ ++ W SLCW+ +T +++ Y+WQ++ L +A LLET Sbjct: 938 ALELLKVCTNVLEEVEKSFVSQIQDWRQGSLCWKK-KTNKKVDEYVWQDVTLLKALLLET 969 Query: 962 RARLMLRGGQFDIGDDLIRKAIFIRTSISGEDHPDTKSARETLGKLNRL 990 RA+L+LRGG FD G++L R I IRT + G +H T +A+ETL KL R+ Sbjct: 998 RAKLLLRGGHFDSGEELCRTCISIRTVMLGHNHDLTLAAQETLAKLVRM 969
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
AT4G23440.1 0.0e+00 65.21 Disease resistance protein (TIR-NBS class) [more]
AT5G56220.1 3.8e-172 37.07 P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
A T G G A C G T T G G A G A A G A A A G C T C C C G G T T T G G G T C C T T G C C T G C T A C A A C T T C T A G A A A T T T G T C G T C A T C G T C T T C G A C G T T C T T T T C A G C A C T C C C T T C G C C G T T C T T T T C T C C A C G G T C A T C G A C A T G T C G A A G G T C A G A A G C A A C A A A G G C T G A C A T G G G A T G T G A A A G C A T G G A C T T C A G A G T T G A T C C G C T A A A C T C A A G T G T G G T G G T G C C A G A T T C T G A A T C T T T G T T G A A A G C T A A A T T T G C A G T T T C G G A T T T G A T T C G A A A T C C A G A A A C T T G T A C T C C A G G T G A T T G T C G G A A G C T C G A T C A G G C T T C G T C G T C A A C T G G T G T A T C T G G A A G T A C T C C T T A T A G T A G A A G C C T T C C T C A T G G A A A T A A C T A T T T G A G G C C T A G A G A A A T G T A C A A A A A G C T T A G T A G A A G T A A C T T T A C T T C T T A C A C A G C C G A T C C G A T T T C G A T T T C C T C G A C T A G A C T A A G G A G T T A T G A T G T T T T C A T A G G T T T G C A C G G T T C C A A G C C T T C A T T G C T G C G G T T T G C T A A T T G G C T T C A A G C A G A G A T G G A G G T T C A T G G G A T G A G T T G C T T T G T G T C T G A T A G A G C A A A A T G T A G G A A T T C T C G C A A G C A T C G A G T C A T T G A G A G G G C G A T G G A T G C A T C C T C G T T T G G A G T T G T G A T T C T A A C A A A G A A G T C G T T C C A G A A T C C T T A C A C C A T C G A G G A G C T G C G G T T T T T T T C T G G T A A G A A G A A C T T G G T T C C A A T A T T T T T T G A C T T G A G T C C A G G A G A T T G T C T T G C C A G A G A C A T T G T G G A G A A A A G G G G A G A T T T G T G G G A A A A A C A T G G T G G T G A C T T G T G G A T T C T G T A T G G A G G A T T G G A G A A G G A A T G G A A A G A A G C C A T C A A A G G G C T T T G T C G G G T C G A C G A G T G G A A A T T C G A A G C T C A G A A T G G T A A C T G G A G G G A T T G C A T A C T G A A A G C C G T T A T G C T A C T T G C A A T G A G G T T G G G A A G G C G A A G C A T T G T C G A G C G C T T G A C G A A A T G G A G G G A G A A G G T A G A G A A A G A A G A G T T C C C T T T C C C C C G A A A C G A G A A T T T C G T A G G C A G G A A G A A A G A A T T A T C A G A G C T A G A G T T C A T A C T T T T T G G C A A T G T A G C T G G T G A T T C C G A A A G A G A T T A C T T C G A A C T T A T A G C T C G A C C G A G A C G A A A G A A T C T G A C C C T T G G C T G C A G T A A A A G C A G C T C A C T T G A A G A G A A A C A G C A C C A A C A A G C A G T A G A A A C A C G A A A C A A G A A G G G T A A A G A A C C T A T T G T G T G G A A G G A G T C T G A A A A A G A G A T C G A A A T G C A A A G C A T T G A A T T T C C T C A G C G G C A T C G A C G A C T G A A G A C A A A A A G T G G C G A A A G G T A T G C C A A G A G A A A G A A A A C A G C C A A A A T T T T G T A C G G A A A A G G T A T A G C T T G T G T T T C G G G G G A C T C G G G A A T C G G T A A G A C C G A G C T T C T T T T A G A A T T C G C G T A T C G A C A T C A C C A A A A G T A C A A G A T G G T T T T A T G G A T T G G A G G T G A A A G C A G A T A T A T C A G G C A G A A T T A T C T G A A C T T A G G T T C C T T C C T A G A A G T T G A T G T A G G A T T T G G A A G T T T T T C A G C T A A A A G C A A G A T C A A G A A T T T T G A G G A G C A G G A A G A G G C A G C C A T T T C A A G A A T T C G T A C A G A G C T G A T G A G A A A C G T T C C A T T T T T G C T G A T A A T C G A T A A T T T A G A G T G C G A A A A G G A T T G G T G G G A T C A C A A A C T T G T G A T G G A T C T T C T C C C T C G T T T T G G T G G C G A G A C G C A T A T C A T A A T A T C C A C T C G A C T T C C T C G T G T A A T G A A T T T G G A A C C G T T G A A A C T G T C T T A C T T G T C G G G G G C T G A A G C A A T G T G T T T A A T G C A A G G A A G C G T T C G A G A C T A C T C G A T T G C A G A G A T C G A T G T T T T G A G A A T G A T C G A A G A G A A A G T T G G A A G G T T A A C G T T A G G C C T T G C G A T A A T T G G T G C G A T C T T A T C C G A G C T T C C C A T A A C A C C A A C T A G A T T G T T G G A T A C A A C C A A T A G A A T G C C T G T C A A A G A T C A A T C A T G G A G T G G T A G A G A A G C T C A T G T T T T C C G A C G C A A T A C G T T C C T T A T G C A G C T T T T C G A A G T G T G T T T C T C C A T T T T C G A C C A T G C C G A G G G G C C A C G G A G C T T G G C A A C T A G A A T G G C T C T A G C G A G T G G T T G G T T C G G T C C T G C T G C T A T T C C C A T T T C G C A A T T A G C C C T T G C A G C T C A C A A G A T A C C C G A A A A G C G A C A G C G A A C G A G G T T A T G G A A G A A G T T G T T A C G T T C C A T G G C T T G T G G T A T T A C T T C A T C T T A C A T G A A A A A G T C A G A A G C G G A A G C A A C T T C C A T G C T G T T A A G G T T C A A T A T G G C A A G A A G C A G T G C C A A A C A G G G A T G C C T A C A T T T C A A T G A T C T C G T A A A G C T A T A T G C G C G C A A G A G A G G C G T G G A C G G A G T T G C A C A A G C A A T G G T T C A A G C T G T C A T G A C G C G C C C C T C G A T C A T T C A T C A C T C C G A A C A T T T G T G G G C A G C T T G T T T C T T G C T C T T C G G G T T C G G T C G G G A C C C T G T A G T C G T C G A A C T C A A A G T C T C G G A G C T A T T G T A C G T C A T A A A A G A A G T G G T C T T G C C G C T T G C C G T G A G G A C A T T T C T C A C A T T C T C C C A A T G C A C C A C C G C G T T G G A A C T T C T C C G G C T A T G C A C A A A C G C A T T A G A A G C T G C C G A T C A A G C C T T C G T C A C A C C G G T C G A G A A G T G G T T C G A T A A G T C G C T T T G C T G G A G G C C A G T T C A A A C A A C T G C A C A G C T G A A T C C T T A T C T T T G G C A G G A G C T A G C T C T G T G C A G A G C A A C A T T A T T A G A A A C C C G A G C A A G G C T A A T G C T A A G A G G G G G A C A A T T C G A C A T C G G G G A C G A T C T A A T C C G A A A G G C C A T C T T C A T C A G A A C T T C G A T A T C A G G C G A G G A T C A T C C A G A T A C A A A A T C T G C T C G A G A A A C T C T C G G T A A A C T C A A T A G G C T T A T T G C T A A T T T C C A T A T T C A T T C T C C T C C A T A G 500 1000 1500 2000 2500 3000 Expect = 1.0E-11 / Score = 46.7 Score = Expect = 4.1E-7 / Score = 30.6 Score = 13.006461 Expect = 1.3E-11 / Score = 46.1 Score = Score = Score = Score = Score = Score = Score = Sequence G3DSA:3.40.50.300 SSF52540 PF13676 PS50104 G3DSA:3.40.50.10140 SSF52200 mobidb-lite mobidb-lite mobidb-lite mobidb-lite PTHR32472 PTHR32472:SF11
IPR Term IPR Description Source Source Term Source Description Alignment
IPR027417 P-loop containing nucleoside triphosphate hydrolase GENE3D 3.40.50.300 coord: 437..604 e-value: 1.0E-11 score: 46.7
IPR027417 P-loop containing nucleoside triphosphate hydrolase SUPERFAMILY 52540 P-loop containing nucleoside triphosphate hydrolases coord: 467..663
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain PFAM PF13676 TIR_2 coord: 176..255 e-value: 4.1E-7 score: 30.6
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain PROSITE PS50104 TIR coord: 159..278 score: 13.006461
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily GENE3D 3.40.50.10140 coord: 129..273 e-value: 1.3E-11 score: 46.1
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily SUPERFAMILY 52200 Toll/Interleukin receptor TIR domain coord: 159..257
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 10..25
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 99..126
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..25
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 101..123
None No IPR available PANTHER PTHR32472 DNA REPAIR PROTEIN RADA coord: 1..994
None No IPR available PANTHER PTHR32472:SF11 DISEASE RESISTANCE PROTEIN (TIR-NBS CLASS) coord: 1..994
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0000725
recombinational repair
biological_process
GO:0007165
signal transduction
molecular_function
GO:0003953
NAD+ nucleosidase activity