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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TAATAAAATTCCAATCTGCAACAGAGTATTTATCCTTTCAAACCAATACAGATTCTAATATTCTCACTCAACACAATAACTTATTCAAACAAAAACCCACTCTCCCTCTTCCAAATTATAAATATTGTGTGTGTGTGTTCTTTCCATTCATAGCCAAATATAGAGAAGGAAGACTTCCTCTTTCCCTTTCAACATTCTTCTTCTTTAAGACATGGCTAAGGTTACTGGAAATAGTCTTTACTTTATAAGGTCGATCCTTCTCGTGCTGGTTTTATGTATTTAATTATCGGTTCCATTCTTTGTGTCTGTTTCTTTGATGTTCTTTTCTAATTTAGCAATGTAATGGCAGGCGAATGAGCTCTTCGGTTGCATCTGAGCAACTTAAGGCACAAACAACTGCATCAATGGTGGTTAGGAAGGTGAAGGCAGCTGTGGAGACAGGCGGTTATGATAATGAGGTAGTTGAACAGAAGAAGACGTTTTGGATGAAAGATCCTAAGAGTGGAAACTGGATTCCCGAGAATCATTTTGAAGAGATGGATGTGGTGGAATTGAGGGAGAAACTGCTGGCTAAACCTAAGAAGCTGCTCTAAAACAGCAAGTGAAAAGCTTCATTTATGTGCAAGAACAAAAGTTCCACCTTTATCCATCTTATCCATGTTACTAAATAACACCTACTGCAAAAACTATTCTAAACTACTTTTCTCTCTCTAATCTGTCACTTCTATCAACTTAAAGTCTCATCTGAATCCTCTAAAGTTCAATGGTGTTGATTTCGACCGATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCTTACTATGCTAAAGAAAAAAAATGAGAGACCATCGTAGCGACATTTCATAT Coding sequence (CDS) ATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCTTACTATGCTAAAGAAAAAAAATGA Protein sequence MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLLLFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK
Homology
BLAST of Cucsat.G3545.T1 vs. NCBI nr
Match: KGN45442.1 (hypothetical protein Csa_016897 [Cucumis sativus]) HSP 1 Score: 208 bits (529), Expect = 1.04e-67 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60 MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL Sbjct: 1 MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60
Query: 61 LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102 LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK Sbjct: 61 LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102
BLAST of Cucsat.G3545.T1 vs. ExPASy TrEMBL
Match: A0A0A0KAN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448040 PE=4 SV=1) HSP 1 Score: 208 bits (529), Expect = 5.03e-68 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60 MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL Sbjct: 1 MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60
Query: 61 LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102 LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK Sbjct: 61 LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KGN45442.1 | 1.04e-67 | 100.00 | hypothetical protein Csa_016897 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KAN2 | 5.03e-68 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448040 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Cucsat.G3545.T1.E1 | Cucsat.G3545.T1.E1 | exon |
Cucsat.G3545.T1.E2 | Cucsat.G3545.T1.E2 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Cucsat.G3545.T1.C1 | Cucsat.G3545.T1.C1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Cucsat.G3545.T1 | Cucsat.G3545.T1-protein | polypeptide |
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