Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATCTAGTGAAGATGATGTATCACTCCATGGTGATGATGATGTGCAGAGTGAAGACAATATTCTTGAGACATCATGTAAGCGAGCTACACGTGGTCCTACTACCATGATTGAGCTCACTCAAATAAGAAGAAAGACACATCGCACAGTAATTAAATACAATGCACTTGGACAGTGGATTGACAAAAATGCAACAAAAATGGTAAGTTATATTGGAATGGCTGTGCGAAGCCACATCCCAATCACATATAGCTCTTGGCCTCAAGTGCCAAGAGAGTTGAAGGAGAAAATTTATGAGTGCATTGAGGTAATGTGTGTTGATTCGCTATGTAGTTAAATATATCATGTTATTAGTTTGATGTACTATACTTACATATTAACTTGTGTTTGTTAGGCTTCTTTTGTTACAAATCCCAAATCAAAAAAAGACATATTGAAGAAAGTTGGCATCGCTTTCCGTCAATTCAAGATCATTTTAAGGACAAAATATATTGTACCATTTCAAGACAATCCAGACCATTTGGCATTCCCACCACCATCATATTCACATATTGAACAAGCTCAATGGGATGCTTTCGTGAGTGATGTCTTATCGATAGATTTTCAA
mRNA sequence
ATATCTAGTGAAGATGATGTATCACTCCATGGTGATGATGATGTGCAGAGTGAAGACAATATTCTTGAGACATCATGTAAGCGAGCTACACGTGGTCCTACTACCATGATTGAGCTCACTCAAATAAGAAGAAAGACACATCGCACAGTAATTAAATACAATGCACTTGGACAGTGGATTGACAAAAATGCAACAAAAATGGTAAGTTATATTGGAATGGCTGTGCGAAGCCACATCCCAATCACATATAGCTCTTGGCCTCAAGTGCCAAGAGAGTTGAAGGAGAAAATTTATGAGTGCATTGAGGTAATGTGTGTTGATTCGCTATACCATTTGGCATTCCCACCACCATCATATTCACATATTGAACAAGCTCAATGGGATGCTTTCGTGAGTGATGTCTTATCGATAGATTTTCAA
Coding sequence (CDS)
ATATCTAGTGAAGATGATGTATCACTCCATGGTGATGATGATGTGCAGAGTGAAGACAATATTCTTGAGACATCATGTAAGCGAGCTACACGTGGTCCTACTACCATGATTGAGCTCACTCAAATAAGAAGAAAGACACATCGCACAGTAATTAAATACAATGCACTTGGACAGTGGATTGACAAAAATGCAACAAAAATGGTAAGTTATATTGGAATGGCTGTGCGAAGCCACATCCCAATCACATATAGCTCTTGGCCTCAAGTGCCAAGAGAGTTGAAGGAGAAAATTTATGAGTGCATTGAGGTAATGTGTGTTGATTCGCTATACCATTTGGCATTCCCACCACCATCATATTCACATATTGAACAAGCTCAATGGGATGCTTTCGTGAGTGATGTCTTATCGATAGATTTTCAA
Protein sequence
ISSEDDVSLHGDDDVQSEDNILETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGMAVRSHIPITYSSWPQVPRELKEKIYECIEVMCVDSLYHLAFPPPSYSHIEQAQWDAFVSDVLSIDFQ
Homology
BLAST of Spg015911.1 vs. NCBI nr
Match:
KAA0062131.1 (uncharacterized protein E6C27_scaffold89G004920 [Cucumis melo var. makuwa])
HSP 1 Score: 109.4 bits (272), Expect = 2.6e-20
Identity = 62/160 (38.75%), Postives = 86/160 (53.75%), Query Frame = 0
Query: 14 DVQSEDNILETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGM 73
DV + E+S ++ RGPT M E+T++R + + VI+YN LGQ I +NATK+ S+IGM
Sbjct: 6 DVATPKEKGESSTQKRKRGPTEMKEITRVRSEGKKLVIQYNELGQAIGQNATKLKSFIGM 65
Query: 74 AVRSHIPITYSSWPQVPRELKEKIYECIEV-----------------MC----------- 133
VR H+PITYS WP VP+E+K+KI+E IE +C
Sbjct: 66 TVRFHVPITYSDWPMVPKEIKDKIFELIEAEFVVDPRSKKTIIQNAGVCFRQFKYRLTTT 125
Query: 134 -----VDSLYHLAFPPPSYSHIEQAQWDAFVSDVLSIDFQ 141
+D + L F P YS I+Q W FV+ L DF+
Sbjct: 126 YVLPFLDDVEKLKFSPNEYSFIDQQHWTEFVASRLKEDFK 165
BLAST of Spg015911.1 vs. NCBI nr
Match:
KAA0044952.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 109.0 bits (271), Expect = 3.4e-20
Identity = 60/156 (38.46%), Postives = 83/156 (53.21%), Query Frame = 0
Query: 7 VSLHGDDDVQSEDNILETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATK 66
V + DV E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK
Sbjct: 500 VDMVDSPDVAPHKEKGESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATK 559
Query: 67 MVSYIGMAVRSHIPITYSSWPQVPRELKEKIYECIEVMC--------------------- 126
+ S+ G VR H+PI YS WP VP+E+K+KI+E IE +
Sbjct: 560 LKSFTGTTVRFHVPIIYSDWPTVPKEIKDKIFELIETIIQNAGVCFRQFKYRLTTTYVLP 619
Query: 127 -VDSLYHLAFPPPSYSHIEQAQWDAFVSDVLSIDFQ 141
+D + L FPP YS I+Q W FV+ L DF+
Sbjct: 620 FLDDIEKLKFPPNEYSFIDQQHWTEFVASRLKEDFK 655
BLAST of Spg015911.1 vs. NCBI nr
Match:
XP_031742166.1 (uncharacterized protein LOC116404093 [Cucumis sativus])
HSP 1 Score: 107.8 bits (268), Expect = 7.5e-20
Identity = 67/165 (40.61%), Postives = 85/165 (51.52%), Query Frame = 0
Query: 9 LHGDDD-VQSEDNILETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKM 68
+H DDD V + ETS ++ RGPT M ++T+ + R VI+YN LGQ I NATK+
Sbjct: 2 VHSDDDEVATPIQRGETSSEKKKRGPTGMKDITRFSSEGRRMVIQYNELGQPIGPNATKL 61
Query: 69 VSYIGMAVRSHIPITYSSWPQVPRELKEKIYECIEV-----------------MCV---- 128
S+IG AVR H+PITYS+W VP E+KEKIYE IE +C
Sbjct: 62 KSFIGTAVRFHVPITYSTWHAVPMEMKEKIYELIEAGFILDPKSKKSILQNVGVCYRGFK 121
Query: 129 ------------DSLYHLAFPPPSYSHIEQAQWDAFVSDVLSIDF 140
D + L PP YS I+Q WD FV+ L DF
Sbjct: 122 SRLTTTYVLPFKDDVKKLKHPPAEYSFIDQDHWDEFVASRLKEDF 166
BLAST of Spg015911.1 vs. NCBI nr
Match:
KAA0060215.1 (hypothetical protein E6C27_scaffold386G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 106.3 bits (264), Expect = 2.2e-19
Identity = 59/151 (39.07%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 23 ETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGMAVRSHIPIT 82
E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK+ S+IG VR H+PI
Sbjct: 192 ESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATKLKSFIGTTVRFHVPII 251
Query: 83 YSSWPQVPRELKEKIYECIEV-----------------MC----------------VDSL 141
YS WP VP+E+K+KI+E IE +C +D +
Sbjct: 252 YSDWPTVPKEIKDKIFELIEAGFVVDPRSKKTIIQNVGVCFRQFKYRLTTTYVLPFLDDV 311
BLAST of Spg015911.1 vs. NCBI nr
Match:
TYK08419.1 (uncharacterized protein E5676_scaffold654G00340 [Cucumis melo var. makuwa])
HSP 1 Score: 106.3 bits (264), Expect = 2.2e-19
Identity = 59/151 (39.07%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 23 ETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGMAVRSHIPIT 82
E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK+ S+IG VR H+PI
Sbjct: 15 ESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATKLKSFIGTTVRFHVPII 74
Query: 83 YSSWPQVPRELKEKIYECIEV-----------------MC----------------VDSL 141
YS WP VP+E+K+KI+E IE +C +D +
Sbjct: 75 YSDWPTVPKEIKDKIFELIEAGFVVDPRSKKAIIQNAGVCFRQFKYRLTTTYVLPFLDDV 134
BLAST of Spg015911.1 vs. ExPASy TrEMBL
Match:
A0A5A7V8W7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004920 PE=3 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 62/160 (38.75%), Postives = 86/160 (53.75%), Query Frame = 0
Query: 14 DVQSEDNILETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGM 73
DV + E+S ++ RGPT M E+T++R + + VI+YN LGQ I +NATK+ S+IGM
Sbjct: 6 DVATPKEKGESSTQKRKRGPTEMKEITRVRSEGKKLVIQYNELGQAIGQNATKLKSFIGM 65
Query: 74 AVRSHIPITYSSWPQVPRELKEKIYECIEV-----------------MC----------- 133
VR H+PITYS WP VP+E+K+KI+E IE +C
Sbjct: 66 TVRFHVPITYSDWPMVPKEIKDKIFELIEAEFVVDPRSKKTIIQNAGVCFRQFKYRLTTT 125
Query: 134 -----VDSLYHLAFPPPSYSHIEQAQWDAFVSDVLSIDFQ 141
+D + L F P YS I+Q W FV+ L DF+
Sbjct: 126 YVLPFLDDVEKLKFSPNEYSFIDQQHWTEFVASRLKEDFK 165
BLAST of Spg015911.1 vs. ExPASy TrEMBL
Match:
A0A5A7TNM0 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002550 PE=4 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 60/156 (38.46%), Postives = 83/156 (53.21%), Query Frame = 0
Query: 7 VSLHGDDDVQSEDNILETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATK 66
V + DV E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK
Sbjct: 500 VDMVDSPDVAPHKEKGESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATK 559
Query: 67 MVSYIGMAVRSHIPITYSSWPQVPRELKEKIYECIEVMC--------------------- 126
+ S+ G VR H+PI YS WP VP+E+K+KI+E IE +
Sbjct: 560 LKSFTGTTVRFHVPIIYSDWPTVPKEIKDKIFELIETIIQNAGVCFRQFKYRLTTTYVLP 619
Query: 127 -VDSLYHLAFPPPSYSHIEQAQWDAFVSDVLSIDFQ 141
+D + L FPP YS I+Q W FV+ L DF+
Sbjct: 620 FLDDIEKLKFPPNEYSFIDQQHWTEFVASRLKEDFK 655
BLAST of Spg015911.1 vs. ExPASy TrEMBL
Match:
A0A5D3D5Q6 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00960 PE=3 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 59/151 (39.07%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 23 ETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGMAVRSHIPIT 82
E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK+ S+IG VR H+PI
Sbjct: 15 ESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATKLKSFIGTTVRFHVPII 74
Query: 83 YSSWPQVPRELKEKIYECIEV-----------------MC----------------VDSL 141
YS WP VP+E+K+KI+E IE +C +D +
Sbjct: 75 YSDWPTVPKEIKDKIFELIEAGFVVDPRSKKAIIQNAGVCFRQFKYRLTTTYVLPFLDDV 134
BLAST of Spg015911.1 vs. ExPASy TrEMBL
Match:
A0A5A7V2W4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00370 PE=3 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 59/151 (39.07%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 23 ETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGMAVRSHIPIT 82
E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK+ S+IG VR H+PI
Sbjct: 192 ESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATKLKSFIGTTVRFHVPII 251
Query: 83 YSSWPQVPRELKEKIYECIEV-----------------MC----------------VDSL 141
YS WP VP+E+K+KI+E IE +C +D +
Sbjct: 252 YSDWPTVPKEIKDKIFELIEAGFVVDPRSKKTIIQNVGVCFRQFKYRLTTTYVLPFLDDV 311
BLAST of Spg015911.1 vs. ExPASy TrEMBL
Match:
A0A5D3CDJ5 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00340 PE=3 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 59/151 (39.07%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 23 ETSCKRATRGPTTMIELTQIRRKTHRTVIKYNALGQWIDKNATKMVSYIGMAVRSHIPIT 82
E+S ++ RGPT M E+T+ R + + VI+YN LGQ I +NATK+ S+IG VR H+PI
Sbjct: 15 ESSTQKRKRGPTEMKEITRARSEGQKLVIQYNELGQAIGQNATKLKSFIGTTVRFHVPII 74
Query: 83 YSSWPQVPRELKEKIYECIEV-----------------MC----------------VDSL 141
YS WP VP+E+K+KI+E IE +C +D +
Sbjct: 75 YSDWPTVPKEIKDKIFELIEAGFVVDPRSKKAIIQNAGVCFRQFKYRLTTTYVLPFLDDV 134
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0062131.1 | 2.6e-20 | 38.75 | uncharacterized protein E6C27_scaffold89G004920 [Cucumis melo var. makuwa] | [more] |
KAA0044952.1 | 3.4e-20 | 38.46 | transposase [Cucumis melo var. makuwa] | [more] |
XP_031742166.1 | 7.5e-20 | 40.61 | uncharacterized protein LOC116404093 [Cucumis sativus] | [more] |
KAA0060215.1 | 2.2e-19 | 39.07 | hypothetical protein E6C27_scaffold386G00370 [Cucumis melo var. makuwa] | [more] |
TYK08419.1 | 2.2e-19 | 39.07 | uncharacterized protein E5676_scaffold654G00340 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V8W7 | 1.2e-20 | 38.75 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5A7TNM0 | 1.6e-20 | 38.46 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002550 PE... | [more] |
A0A5D3D5Q6 | 1.1e-19 | 39.07 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5A7V2W4 | 1.1e-19 | 39.07 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5D3CDJ5 | 1.1e-19 | 39.07 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
Match Name | E-value | Identity | Description | |